RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 ICMTO60725 284 aa13.15□□□□□ -0.3
TDP2-201ENST00000341060 SLC25A12O75746 678 aa13.15□□□□□ -0.3
TDP2-201ENST00000341060 ZNF81P51508 661 aa13.15□□□□□ -0.3
TDP2-201ENST00000341060 NR0B1P51843 470 aaKnown RBP13.15□□□□□ -0.3
TDP2-201ENST00000341060 PLCXD2Q0VAA5 305 aa13.15□□□□□ -0.3
TDP2-201ENST00000341060 ODF4Q2M2E3 257 aa13.15□□□□□ -0.3
TDP2-201ENST00000341060 C14orf28Q4W4Y0 310 aa13.15□□□□□ -0.3
TDP2-201ENST00000341060 HLA-DQA1Q5Y7H0 255 aa13.15□□□□□ -0.3
TDP2-201ENST00000341060 SLC25A25Q6KCM7 469 aa13.15□□□□□ -0.3
TDP2-201ENST00000341060 LRRC69Q6ZNQ3 347 aa13.15□□□□□ -0.3
TDP2-201ENST00000341060 KANSL1Q7Z3B3 1105 aa13.15□□□□□ -0.3
TDP2-201ENST00000341060 GLB1L2Q8IW92 636 aa13.15□□□□□ -0.3
TDP2-201ENST00000341060 SIX5Q8N196 739 aa13.15□□□□□ -0.3
TDP2-201ENST00000341060 SPICQ8N5J4 248 aa13.15□□□□□ -0.3
TDP2-201ENST00000341060 ZNF519Q8TB69 540 aa13.15□□□□□ -0.3
TDP2-201ENST00000341060 DAZLQ92904 295 aaKnown RBP13.15□□□□□ -0.3
TDP2-201ENST00000341060 OR8B4Q96RC9 309 aa13.15□□□□□ -0.3
TDP2-201ENST00000341060 TBL1XR1Q9BZK7 514 aa13.15□□□□□ -0.3
TDP2-201ENST00000341060 ULBP3Q9BZM4 244 aa13.15□□□□□ -0.3
TDP2-201ENST00000341060 CHRDQ9H2X0 955 aa13.15□□□□□ -0.3
TDP2-201ENST00000341060 PRDM6Q9NQX0 595 aa13.15□□□□□ -0.3
TDP2-201ENST00000341060 EIF3KQ9UBQ5 218 aaKnown RBP13.15□□□□□ -0.3
TDP2-201ENST00000341060 PRSS37A4D1T9 235 aa13.14□□□□□ -0.31
TDP2-201ENST00000341060 LINC00862A6NCI5 91 aa13.14□□□□□ -0.31
TDP2-201ENST00000341060 METTL12A8MUP2 240 aa13.14□□□□□ -0.31
TDP2-201ENST00000341060 NDUFB6O95139 128 aa13.14□□□□□ -0.31
TDP2-201ENST00000341060 RPL27P61353 136 aaKnown RBP13.14□□□□□ -0.31
TDP2-201ENST00000341060 HSD11B2P80365 405 aa13.14□□□□□ -0.31
TDP2-201ENST00000341060 PLA2G7Q13093 441 aa13.14□□□□□ -0.31
TDP2-201ENST00000341060 SNTA1Q13424 505 aa13.14□□□□□ -0.31
TDP2-201ENST00000341060 OGFOD3Q6PK18 319 aa13.14□□□□□ -0.31
TDP2-201ENST00000341060 OR8H3Q8N146 312 aa13.14□□□□□ -0.31
TDP2-201ENST00000341060 ASB17Q8WXJ9 295 aa13.14□□□□□ -0.31
TDP2-201ENST00000341060 DNAJA3Q96EY1 480 aa13.14□□□□□ -0.31
TDP2-201ENST00000341060 WWTR1Q9GZV5 400 aa13.14□□□□□ -0.31
TDP2-201ENST00000341060 CLEC4MQ9H2X3 399 aaPredicted RBP13.14□□□□□ -0.31
TDP2-201ENST00000341060 B9D1Q9UPM9 204 aa13.14□□□□□ -0.31
TDP2-201ENST00000341060 PCDHGA5Q9Y5G8 931 aa13.14□□□□□ -0.31
TDP2-201ENST00000341060 AUP1Q9Y679 476 aa13.14□□□□□ -0.31
TDP2-201ENST00000341060 RHPN2P1A8MT19 583 aa13.13□□□□□ -0.31
TDP2-201ENST00000341060 NPIPB7O75200 414 aa13.13□□□□□ -0.31
TDP2-201ENST00000341060 WISP1O95388 367 aa13.13□□□□□ -0.31
TDP2-201ENST00000341060 PLGP00747 810 aaPredicted RBP13.13□□□□□ -0.31
TDP2-201ENST00000341060 HLA-DQA2P01906 255 aa13.13□□□□□ -0.31
TDP2-201ENST00000341060 GP1BBP13224 206 aa13.13□□□□□ -0.31
TDP2-201ENST00000341060 IFNGR1P15260 489 aa13.13□□□□□ -0.31
TDP2-201ENST00000341060 RAD52P43351 418 aa13.13□□□□□ -0.31
TDP2-201ENST00000341060 CENPAP49450 140 aa13.13□□□□□ -0.31
TDP2-201ENST00000341060 BLVRAP53004 296 aa13.13□□□□□ -0.31
TDP2-201ENST00000341060 PNLIPRP2P54317 469 aa13.13□□□□□ -0.31
TDP2-201ENST00000341060 NSDHLQ15738 373 aa13.13□□□□□ -0.31
TDP2-201ENST00000341060 ACKR1Q16570 336 aa13.13□□□□□ -0.31
TDP2-201ENST00000341060 MEP1BQ16820 701 aa13.13□□□□□ -0.31
TDP2-201ENST00000341060 TEX30Q5JUR7 227 aa13.13□□□□□ -0.31
TDP2-201ENST00000341060 ZNF626Q68DY1 528 aa13.13□□□□□ -0.31
TDP2-201ENST00000341060 ANKRD16Q6P6B7 361 aa13.13□□□□□ -0.31
TDP2-201ENST00000341060 ZNF679Q8IYX0 411 aa13.13□□□□□ -0.31
TDP2-201ENST00000341060 OR8K3Q8NH51 312 aa13.13□□□□□ -0.31
TDP2-201ENST00000341060 TSEN15Q8WW01 171 aaKnown RBP13.13□□□□□ -0.31
TDP2-201ENST00000341060 ATOH1Q92858 354 aaPredicted RBP13.13□□□□□ -0.31
TDP2-201ENST00000341060 SLC25A36Q96CQ1 311 aa13.13□□□□□ -0.31
TDP2-201ENST00000341060 OMA1Q96E52 524 aa13.13□□□□□ -0.31
TDP2-201ENST00000341060 SEC22CQ9BRL7 303 aa13.13□□□□□ -0.31
TDP2-201ENST00000341060 ELOVL3Q9HB03 270 aa13.13□□□□□ -0.31
TDP2-201ENST00000341060 COPS7AQ9UBW8 275 aa13.13□□□□□ -0.31
TDP2-201ENST00000341060 ABCA7Q8IZY2 2146 aa13.13□□□□□ -0.31
TDP2-201ENST00000341060 A0A1W2PQ72 361 aa13.13□□□□□ -0.31
TDP2-201ENST00000341060 GGT3PA6NGU5 568 aa13.13□□□□□ -0.31
TDP2-201ENST00000341060 H7C417 338 aa13.13□□□□□ -0.31
TDP2-201ENST00000341060 SUSD5O60279 629 aa13.13□□□□□ -0.31
TDP2-201ENST00000341060 CREBL2O60519 120 aaPredicted RBP13.13□□□□□ -0.31
TDP2-201ENST00000341060 TOXO94900 526 aa13.13□□□□□ -0.31
TDP2-201ENST00000341060 ALDOBP05062 364 aa13.13□□□□□ -0.31
TDP2-201ENST00000341060 ABCD3P28288 659 aa13.13□□□□□ -0.31
TDP2-201ENST00000341060 SSTR2P30874 369 aa13.13□□□□□ -0.31
TDP2-201ENST00000341060 POLR2HP52434 150 aaKnown RBP13.13□□□□□ -0.31
TDP2-201ENST00000341060 HNRNPKP61978 463 aaKnown RBP eCLIP13.13□□□□□ -0.31
TDP2-201ENST00000341060 SLC17A1Q14916 467 aa13.13□□□□□ -0.31
TDP2-201ENST00000341060 VWA2Q5GFL6 755 aa13.13□□□□□ -0.31
TDP2-201ENST00000341060 PRAMEF17Q5VTA0 474 aa13.13□□□□□ -0.31
TDP2-201ENST00000341060 MAMSTRQ6ZN01 415 aa13.13□□□□□ -0.31
TDP2-201ENST00000341060 SLC35D2Q76EJ3 337 aa13.13□□□□□ -0.31
TDP2-201ENST00000341060 CARFQ8N187 725 aa13.13□□□□□ -0.31
TDP2-201ENST00000341060 OR1N1Q8NGS0 311 aa13.13□□□□□ -0.31
TDP2-201ENST00000341060 OR1L3Q8NH93 324 aa13.13□□□□□ -0.31
TDP2-201ENST00000341060 TXNIPQ9H3M7 391 aa13.13□□□□□ -0.31
TDP2-201ENST00000341060 VSX1Q9NZR4 365 aaPredicted RBP13.13□□□□□ -0.31
TDP2-201ENST00000341060 MTFP1Q9UDX5 166 aa13.13□□□□□ -0.31
TDP2-201ENST00000341060 TMED7-TICAM2A0A0A6YYA0 188 aa13.12□□□□□ -0.31
TDP2-201ENST00000341060 SNRPGP15A8MWD9 76 aa13.12□□□□□ -0.31
TDP2-201ENST00000341060 H3BSH0 61 aa13.12□□□□□ -0.31
TDP2-201ENST00000341060 SDC3O75056 442 aa13.12□□□□□ -0.31
TDP2-201ENST00000341060 CTAG2O75638 210 aa13.12□□□□□ -0.31
TDP2-201ENST00000341060 RBBP9O75884 186 aa13.12□□□□□ -0.31
TDP2-201ENST00000341060 DXOO77932 396 aaKnown RBP13.12□□□□□ -0.31
TDP2-201ENST00000341060 MPC2O95563 127 aa13.12□□□□□ -0.31
TDP2-201ENST00000341060 IFNA7P01567 189 aa13.12□□□□□ -0.31
TDP2-201ENST00000341060 IGHMP01871 453 aa13.12□□□□□ -0.31
TDP2-201ENST00000341060 IL5P05113 134 aa13.12□□□□□ -0.31
TDP2-201ENST00000341060 ITGA5P08648 1049 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms