RNA–Protein interactions for RNA: ENST00000340648.5

RRP1B-201, Transcript of ribosomal RNA processing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP1B, Length 5,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-201ENST00000340648 OR2F1Q13607 317 aa13.58□□□□□ -0.24
RRP1B-201ENST00000340648 GLDNQ6ZMI3 551 aaPredicted RBP13.58□□□□□ -0.24
RRP1B-201ENST00000340648 ZNF793Q6ZN11 406 aa13.58□□□□□ -0.24
RRP1B-201ENST00000340648 C17orf47Q8NEP4 570 aa13.58□□□□□ -0.24
RRP1B-201ENST00000340648 BORCS8Q96FH0 119 aa13.58□□□□□ -0.24
RRP1B-201ENST00000340648 LPAR4Q99677 370 aa13.58□□□□□ -0.24
RRP1B-201ENST00000340648 ZP3P21754 424 aa13.58□□□□□ -0.24
RRP1B-201ENST00000340648 EIF4EBP2Q13542 120 aaPredicted RBP13.58□□□□□ -0.24
RRP1B-201ENST00000340648 SMUG1Q53HV7 270 aa13.58□□□□□ -0.24
RRP1B-201ENST00000340648 ZNF362Q5T0B9 420 aaPredicted RBP13.58□□□□□ -0.24
RRP1B-201ENST00000340648 KIR3DX1Q9H7L2 352 aa13.58□□□□□ -0.24
RRP1B-201ENST00000340648 C20orf141Q9NUB4 165 aa13.58□□□□□ -0.24
RRP1B-201ENST00000340648 ING1Q9UK53 422 aaPredicted RBP13.58□□□□□ -0.24
RRP1B-201ENST00000340648 CSAG2Q9Y5P2 127 aa13.58□□□□□ -0.24
RRP1B-201ENST00000340648 TMEM200CA6NKL6 621 aa13.57□□□□□ -0.24
RRP1B-201ENST00000340648 NTN1O95631 604 aa13.57□□□□□ -0.24
RRP1B-201ENST00000340648 OR4E1P0C645 316 aa13.57□□□□□ -0.24
RRP1B-201ENST00000340648 ZNF250P15622 560 aa13.57□□□□□ -0.24
RRP1B-201ENST00000340648 CXCL3P19876 107 aa13.57□□□□□ -0.24
RRP1B-201ENST00000340648 GUCA2AQ02747 115 aa13.57□□□□□ -0.24
RRP1B-201ENST00000340648 GLYR1Q49A26 553 aaPredicted RBP13.57□□□□□ -0.24
RRP1B-201ENST00000340648 TANGO2Q6ICL3 276 aa13.57□□□□□ -0.24
RRP1B-201ENST00000340648 KDM8Q8N371 416 aa13.57□□□□□ -0.24
RRP1B-201ENST00000340648 OR10Z1Q8NGY1 313 aa13.57□□□□□ -0.24
RRP1B-201ENST00000340648 C3orf49Q96BT1 292 aa13.57□□□□□ -0.24
RRP1B-201ENST00000340648 DCBLD2Q96PD2 775 aa13.57□□□□□ -0.24
RRP1B-201ENST00000340648 PARP12Q9H0J9 701 aaKnown RBP13.57□□□□□ -0.24
RRP1B-201ENST00000340648 PLEK2Q9NYT0 353 aa13.57□□□□□ -0.24
RRP1B-201ENST00000340648 KCND3Q9UK17 655 aa13.57□□□□□ -0.24
RRP1B-201ENST00000340648 OR52A1Q9UKL2 312 aa13.57□□□□□ -0.24
RRP1B-201ENST00000340648 WDPCPO95876 746 aa13.57□□□□□ -0.24
RRP1B-201ENST00000340648 CCR2P41597 374 aa13.57□□□□□ -0.24
RRP1B-201ENST00000340648 C21orf58P58505 322 aa13.57□□□□□ -0.24
RRP1B-201ENST00000340648 TAS2R46P59540 309 aa13.57□□□□□ -0.24
RRP1B-201ENST00000340648 ACY1Q03154 408 aa13.57□□□□□ -0.24
RRP1B-201ENST00000340648 MDGA2Q7Z553 956 aa13.57□□□□□ -0.24
RRP1B-201ENST00000340648 C9orf62Q8N4C0 152 aa13.57□□□□□ -0.24
RRP1B-201ENST00000340648 SLC22A24Q8N4F4 322 aa13.57□□□□□ -0.24
RRP1B-201ENST00000340648 C19orf47Q8N9M1 422 aaKnown RBP13.57□□□□□ -0.24
RRP1B-201ENST00000340648 NICN1Q9BSH3 213 aa13.57□□□□□ -0.24
RRP1B-201ENST00000340648 GPATCH2Q9NW75 528 aa13.57□□□□□ -0.24
RRP1B-201ENST00000340648 LRIT1Q9P2V4 623 aa13.57□□□□□ -0.24
RRP1B-201ENST00000340648 ZNF223Q9UK11 482 aaPredicted RBP13.57□□□□□ -0.24
RRP1B-201ENST00000340648 HCRTR1O43613 425 aa13.57□□□□□ -0.24
RRP1B-201ENST00000340648 CA3P07451 260 aa13.57□□□□□ -0.24
RRP1B-201ENST00000340648 DHPSP49366 369 aaPredicted RBP13.57□□□□□ -0.24
RRP1B-201ENST00000340648 PCBP4P57723 403 aaKnown RBP13.57□□□□□ -0.24
RRP1B-201ENST00000340648 ACOT7LQ6ZUV0 252 aa13.57□□□□□ -0.24
RRP1B-201ENST00000340648 OR56B1Q8NGI3 324 aa13.57□□□□□ -0.24
RRP1B-201ENST00000340648 C14orf79Q96F83 325 aa13.57□□□□□ -0.24
RRP1B-201ENST00000340648 SLC19A3Q9BZV2 496 aa13.57□□□□□ -0.24
RRP1B-201ENST00000340648 LYRM4Q9HD34 91 aa13.57□□□□□ -0.24
RRP1B-201ENST00000340648 THAP10Q9P2Z0 257 aaPredicted RBP13.57□□□□□ -0.24
RRP1B-201ENST00000340648 URB1O60287 2271 aaKnown RBP13.57□□□□□ -0.24
RRP1B-201ENST00000340648 PRAMEF26H0Y7S4 382 aa13.57□□□□□ -0.24
RRP1B-201ENST00000340648 PRKNO60260 465 aaPredicted RBP13.57□□□□□ -0.24
RRP1B-201ENST00000340648 EMDP50402 254 aa13.57□□□□□ -0.24
RRP1B-201ENST00000340648 LSM11P83369 360 aaKnown RBP eCLIP13.57□□□□□ -0.244e-7■■■■■ 45.4
RRP1B-201ENST00000340648 DEFB133Q30KQ1 61 aa13.57□□□□□ -0.24
RRP1B-201ENST00000340648 C2orf76Q3KRA6 126 aa13.57□□□□□ -0.24
RRP1B-201ENST00000340648 ACTBL2Q562R1 376 aa13.57□□□□□ -0.24
RRP1B-201ENST00000340648 CD300LDQ6UXZ3 194 aa13.57□□□□□ -0.24
RRP1B-201ENST00000340648 LINC00615Q96LM1 132 aaPredicted RBP13.57□□□□□ -0.24
RRP1B-201ENST00000340648 FAM212BQ9NTI7 297 aaPredicted RBP13.57□□□□□ -0.24
RRP1B-201ENST00000340648 RAB22AQ9UL26 194 aa13.57□□□□□ -0.24
RRP1B-201ENST00000340648 TMED7-TICAM2A0A0A6YYA0 188 aa13.56□□□□□ -0.24
RRP1B-201ENST00000340648 HOXC12P31275 282 aa13.56□□□□□ -0.24
RRP1B-201ENST00000340648 ZNF93P35789 620 aaPredicted RBP13.56□□□□□ -0.24
RRP1B-201ENST00000340648 IAH1Q2TAA2 248 aaPredicted RBP13.56□□□□□ -0.24
RRP1B-201ENST00000340648 DCXRQ7Z4W1 244 aa13.56□□□□□ -0.24
RRP1B-201ENST00000340648 ABI3BPQ7Z7G0 1075 aa13.56□□□□□ -0.24
RRP1B-201ENST00000340648 FJX1Q86VR8 437 aa13.56□□□□□ -0.24
RRP1B-201ENST00000340648 SLC38A6Q8IZM9 456 aa13.56□□□□□ -0.24
RRP1B-201ENST00000340648 CHAC2Q8WUX2 184 aa13.56□□□□□ -0.24
RRP1B-201ENST00000340648 FAM3CQ92520 227 aa13.56□□□□□ -0.24
RRP1B-201ENST00000340648 SPTSSAQ969W0 71 aa13.56□□□□□ -0.24
RRP1B-201ENST00000340648 TCEAL2Q9H3H9 227 aaPredicted RBP13.56□□□□□ -0.24
RRP1B-201ENST00000340648 TMED7Q9Y3B3 224 aa13.56□□□□□ -0.24
RRP1B-201ENST00000340648 PPIL1Q9Y3C6 166 aa13.56□□□□□ -0.24
RRP1B-201ENST00000340648 CFIP05156 583 aa13.56□□□□□ -0.24
RRP1B-201ENST00000340648 RBM39Q14498 530 aaKnown RBP13.56□□□□□ -0.24
RRP1B-201ENST00000340648 OR10K2Q6IF99 312 aa13.56□□□□□ -0.24
RRP1B-201ENST00000340648 MAMSTRQ6ZN01 415 aa13.56□□□□□ -0.24
RRP1B-201ENST00000340648 PLXDC1Q8IUK5 500 aa13.56□□□□□ -0.24
RRP1B-201ENST00000340648 WDSUB1Q8N9V3 476 aa13.56□□□□□ -0.24
RRP1B-201ENST00000340648 TEX19Q8NA77 164 aa13.56□□□□□ -0.24
RRP1B-201ENST00000340648 OR4D6Q8NGJ1 314 aa13.56□□□□□ -0.24
RRP1B-201ENST00000340648 OR1E3Q8WZA6 343 aa13.56□□□□□ -0.24
RRP1B-201ENST00000340648 NAA11Q9BSU3 229 aaPredicted RBP13.56□□□□□ -0.24
RRP1B-201ENST00000340648 NRSN2Q9GZP1 204 aa13.56□□□□□ -0.24
RRP1B-201ENST00000340648 C1orf198Q9H425 327 aa13.56□□□□□ -0.24
RRP1B-201ENST00000340648 ZNF304Q9HCX3 659 aa13.56□□□□□ -0.24
RRP1B-201ENST00000340648 SMCO4Q9NRQ5 59 aa13.56□□□□□ -0.24
RRP1B-201ENST00000340648 EXOGQ9Y2C4 368 aaKnown RBP13.56□□□□□ -0.24
RRP1B-201ENST00000340648 MYO7AQ13402 2215 aa13.56□□□□□ -0.24
RRP1B-201ENST00000340648 PLPP2O43688 288 aa13.56□□□□□ -0.24
RRP1B-201ENST00000340648 IDH3GP51553 393 aaPredicted RBP13.56□□□□□ -0.24
RRP1B-201ENST00000340648 POLR2HP52434 150 aaKnown RBP13.56□□□□□ -0.24
RRP1B-201ENST00000340648 MLC1Q15049 377 aa13.56□□□□□ -0.24
RRP1B-201ENST00000340648 KCNRGQ8N5I3 272 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms