RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 ZFP3Q96NJ6 502 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 TMEM43Q9BTV4 400 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 TSSK6Q9BXA6 273 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 ACTR3CQ9C0K3 210 aaPredicted RBP3.04□□□□□ -1.92
CSMD3-202ENST00000339701 IFT22Q9H7X7 185 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 FAM206AQ9NX38 181 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 PCTPQ9UKL6 214 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 B4DXG7 233 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 H0Y8G0 127 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 M0QYG6 137 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 OR4Q2P0C623 313 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 CRISP2P16562 243 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 GABRB3P28472 473 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 SLC5A2P31639 672 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 EFNA3P52797 238 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 ZNF616Q08AN1 781 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 ARL16Q0P5N6 197 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 FABP9Q0Z7S8 132 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 IL11RAQ14626 422 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 NRN1LQ496H8 165 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 ZNF793Q6ZN11 406 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 Q6ZVU0 165 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 KCT2Q8NC54 265 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 OR4M1Q8NGD0 313 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 OR6M1Q8NGM8 313 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 NFKBIDQ8NI38 313 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 MYADMQ96S97 322 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 DHRS4Q9BTZ2 278 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 ACKR4Q9NPB9 350 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 ACTL7AQ9Y615 435 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 ZNF727A8MUV8 499 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 E5RJQ4 531 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 BET1O15155 118 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 DDAH2O95865 285 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 SRMP19623 302 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 FGF7P21781 194 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 ADIRFQ15847 76 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 ATP6V1FQ16864 119 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 DGAT2L6Q6ZPD8 337 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 SLC16A14Q7RTX9 510 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 MKXQ8IYA7 352 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 LRRC25Q8N386 305 aaPredicted RBP3.04□□□□□ -1.92
CSMD3-202ENST00000339701 FAM83FQ8NEG4 500 aaPredicted RBP3.04□□□□□ -1.92
CSMD3-202ENST00000339701 CMTM2Q8TAZ6 248 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 RAB37Q96AX2 223 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 MS4A4EQ96PG1 132 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 GPX7Q96SL4 187 aaPredicted RBP3.04□□□□□ -1.92
CSMD3-202ENST00000339701 GPR62Q9BZJ7 368 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 CRISPLD2Q9H0B8 497 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 ELOVL3Q9HB03 270 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 SIRT7Q9NRC8 400 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 MMP17Q9ULZ9 603 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 PKDREJQ9NTG1 2253 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 OBSL1O75147 1896 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 MYO9AB2RTY4 2548 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 RPS10-NUDT3A0A1W2PQS6 291 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 TMEM150BA6NC51 233 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 ANKRD66B4E2M5 251 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 MSTNO14793 375 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 TGFB1I1O43294 461 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 AQP8O94778 261 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 FTH1P19P0C7X4 201 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 LAP3P28838 519 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 IDUAP35475 653 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 NKAIN1Q4KMZ8 207 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 FCRLBQ6BAA4 426 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 PLAG1Q6DJT9 500 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 TMEM64Q6YI46 380 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 OLIG3Q7RTU3 272 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 ZNF598Q86UK7 904 aaKnown RBP3.04□□□□□ -1.92
CSMD3-202ENST00000339701 TCEAL8Q8IYN2 117 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 UMODL1-AS1Q8N2C9 162 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 MUC15Q8N387 334 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 SMRP1Q8NCR6 262 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 OR52N1Q8NH53 320 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 ALG12Q9BV10 488 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 MFFQ9GZY8 342 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 C20orf85Q9H1P6 137 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 OR10A5Q9H207 317 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 OR10A2Q9H208 303 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 PIF1Q9H611 641 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 CD84Q9UIB8 345 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 ERRFI1Q9UJM3 462 aaPredicted RBP3.04□□□□□ -1.92
CSMD3-202ENST00000339701 OAZ3Q9UMX2 235 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 CUL9Q8IWT3 2517 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 I6L893 689 aaPredicted RBP3.04□□□□□ -1.92
CSMD3-202ENST00000339701 PRF1P14222 555 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 AHCYP23526 432 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 CD34P28906 385 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 SFTPDP35247 375 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 CDC20Q12834 499 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 SLAMF1Q13291 335 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 MBTPS1Q14703 1052 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 C1orf53Q5VUE5 145 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 SCD5Q86SK9 330 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 ENTHD1Q8IYW4 607 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 SLC15A4Q8N697 577 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 OR13C5Q8NGS8 318 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 CANT1Q8WVQ1 401 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 IMP4Q96G21 291 aaKnown RBP3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms