RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 WDR76Q9H967 626 aa13.1□□□□□ -0.31
CDK5RAP3-201ENST00000338399 ZNF71Q9NQZ8 489 aaPredicted RBP13.1□□□□□ -0.31
CDK5RAP3-201ENST00000338399 MCTS1Q9ULC4 181 aaKnown RBP13.1□□□□□ -0.31
CDK5RAP3-201ENST00000338399 COPS3Q9UNS2 423 aa13.1□□□□□ -0.31
CDK5RAP3-201ENST00000338399 IGF2RP11717 2491 aa13.1□□□□□ -0.31
CDK5RAP3-201ENST00000338399 ANKRD11Q6UB99 2663 aaPredicted RBP13.1□□□□□ -0.31
CDK5RAP3-201ENST00000338399 A0A1B0GVC2 190 aa13.1□□□□□ -0.31
CDK5RAP3-201ENST00000338399 ZNHIT1O43257 154 aa13.1□□□□□ -0.31
CDK5RAP3-201ENST00000338399 GLO1Q04760 184 aa13.1□□□□□ -0.31
CDK5RAP3-201ENST00000338399 TSTQ16762 297 aaKnown RBP13.1□□□□□ -0.31
CDK5RAP3-201ENST00000338399 RPUSD3Q6P087 351 aaKnown RBP13.1□□□□□ -0.31
CDK5RAP3-201ENST00000338399 ZNF322Q6U7Q0 402 aaPredicted RBP13.1□□□□□ -0.31
CDK5RAP3-201ENST00000338399 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.1□□□□□ -0.31
CDK5RAP3-201ENST00000338399 ZNF485Q8NCK3 441 aa13.1□□□□□ -0.31
CDK5RAP3-201ENST00000338399 OR6N2Q8NGY6 317 aa13.1□□□□□ -0.31
CDK5RAP3-201ENST00000338399 OR52N1Q8NH53 320 aa13.1□□□□□ -0.31
CDK5RAP3-201ENST00000338399 ZCCHC14Q8WYQ9 949 aaKnown RBP13.1□□□□□ -0.31
CDK5RAP3-201ENST00000338399 NMD3Q96D46 503 aaKnown RBP13.1□□□□□ -0.31
CDK5RAP3-201ENST00000338399 YIPF6Q96EC8 236 aa13.1□□□□□ -0.31
CDK5RAP3-201ENST00000338399 OPALINQ96PE5 141 aa13.1□□□□□ -0.31
CDK5RAP3-201ENST00000338399 INTS14Q96SY0 518 aa13.1□□□□□ -0.31
CDK5RAP3-201ENST00000338399 PRRG4Q9BZD6 226 aa13.1□□□□□ -0.31
CDK5RAP3-201ENST00000338399 MARCH7Q9H992 704 aa13.1□□□□□ -0.31
CDK5RAP3-201ENST00000338399 ISG20L2Q9H9L3 353 aaKnown RBP13.1□□□□□ -0.31
CDK5RAP3-201ENST00000338399 ING1Q9UK53 422 aaPredicted RBP13.1□□□□□ -0.31
CDK5RAP3-201ENST00000338399 CAB39Q9Y376 341 aaPredicted RBP13.1□□□□□ -0.31
CDK5RAP3-201ENST00000338399 PHF3Q92576 2039 aaKnown RBP13.09□□□□□ -0.31
CDK5RAP3-201ENST00000338399 CACNA1GO43497 2377 aa13.09□□□□□ -0.31
CDK5RAP3-201ENST00000338399 AQP8O94778 261 aa13.09□□□□□ -0.31
CDK5RAP3-201ENST00000338399 ZNF432O94892 652 aa13.09□□□□□ -0.31
CDK5RAP3-201ENST00000338399 MPZL1O95297 269 aa13.09□□□□□ -0.31
CDK5RAP3-201ENST00000338399 QDPRP09417 244 aa13.09□□□□□ -0.31
CDK5RAP3-201ENST00000338399 CD36P16671 472 aa13.09□□□□□ -0.31
CDK5RAP3-201ENST00000338399 NTF4P34130 210 aa13.09□□□□□ -0.31
CDK5RAP3-201ENST00000338399 PTGS2P35354 604 aa13.09□□□□□ -0.31
CDK5RAP3-201ENST00000338399 TGFBR2P37173 567 aa13.09□□□□□ -0.31
CDK5RAP3-201ENST00000338399 RPS27P42677 84 aaKnown RBP13.09□□□□□ -0.31
CDK5RAP3-201ENST00000338399 CSNK1A1P48729 337 aa13.09□□□□□ -0.31
CDK5RAP3-201ENST00000338399 BLVRAP53004 296 aa13.09□□□□□ -0.31
CDK5RAP3-201ENST00000338399 HIST3H3Q16695 136 aa13.09□□□□□ -0.31
CDK5RAP3-201ENST00000338399 TMPRSS11AQ6ZMR5 421 aa13.09□□□□□ -0.31
CDK5RAP3-201ENST00000338399 TMEM123Q8N131 208 aa13.09□□□□□ -0.31
CDK5RAP3-201ENST00000338399 OR6N1Q8NGY5 312 aa13.09□□□□□ -0.31
CDK5RAP3-201ENST00000338399 RNF128Q8TEB7 428 aa13.09□□□□□ -0.31
CDK5RAP3-201ENST00000338399 MCHR2Q969V1 340 aa13.09□□□□□ -0.31
CDK5RAP3-201ENST00000338399 ARHGAP9Q9BRR9 750 aa13.09□□□□□ -0.31
CDK5RAP3-201ENST00000338399 MRPL22Q9NWU5 206 aaKnown RBP13.09□□□□□ -0.31
CDK5RAP3-201ENST00000338399 GLTPQ9NZD2 209 aa13.09□□□□□ -0.31
CDK5RAP3-201ENST00000338399 RSL24D1Q9UHA3 163 aaKnown RBP13.09□□□□□ -0.31
CDK5RAP3-201ENST00000338399 MED19A0JLT2 244 aaPredicted RBP13.08□□□□□ -0.32
CDK5RAP3-201ENST00000338399 AQP7O14520 342 aa13.08□□□□□ -0.32
CDK5RAP3-201ENST00000338399 MAGEB4O15481 346 aaPredicted RBP13.08□□□□□ -0.32
CDK5RAP3-201ENST00000338399 AKAP8O43823 692 aaKnown RBP13.08□□□□□ -0.32
CDK5RAP3-201ENST00000338399 SCG5P05408 212 aa13.08□□□□□ -0.32
CDK5RAP3-201ENST00000338399 FAM87AP0C7U9 286 aa13.08□□□□□ -0.32
CDK5RAP3-201ENST00000338399 NR4A1P22736 598 aa13.08□□□□□ -0.32
CDK5RAP3-201ENST00000338399 RGS6P49758 472 aa13.08□□□□□ -0.32
CDK5RAP3-201ENST00000338399 MLLT11Q13015 90 aaPredicted RBP13.08□□□□□ -0.32
CDK5RAP3-201ENST00000338399 MEP1BQ16820 701 aa13.08□□□□□ -0.32
CDK5RAP3-201ENST00000338399 PHYHD1Q5SRE7 291 aa13.08□□□□□ -0.32
CDK5RAP3-201ENST00000338399 LRFN4Q6PJG9 635 aa13.08□□□□□ -0.32
CDK5RAP3-201ENST00000338399 SLC25A47Q6Q0C1 308 aa13.08□□□□□ -0.32
CDK5RAP3-201ENST00000338399 DPY19L4Q7Z388 723 aa13.08□□□□□ -0.32
CDK5RAP3-201ENST00000338399 CDC20BQ86Y33 519 aa13.08□□□□□ -0.32
CDK5RAP3-201ENST00000338399 FNDC8Q8TC99 324 aa13.08□□□□□ -0.32
CDK5RAP3-201ENST00000338399 TMEM54Q969K7 222 aa13.08□□□□□ -0.32
CDK5RAP3-201ENST00000338399 ISOC1Q96CN7 298 aa13.08□□□□□ -0.32
CDK5RAP3-201ENST00000338399 PLSCR2Q9NRY7 297 aa13.08□□□□□ -0.32
CDK5RAP3-201ENST00000338399 NCOR2Q9Y618 2525 aa13.08□□□□□ -0.32
CDK5RAP3-201ENST00000338399 A0A1B0GTH9 108 aa13.08□□□□□ -0.32
CDK5RAP3-201ENST00000338399 CENPBD1B2RD01 187 aa13.08□□□□□ -0.32
CDK5RAP3-201ENST00000338399 ZNF670-ZNF695F2Z2N8 137 aa13.08□□□□□ -0.32
CDK5RAP3-201ENST00000338399 J3QLW9 94 aa13.08□□□□□ -0.32
CDK5RAP3-201ENST00000338399 ZNF593O00488 134 aaPredicted RBP13.08□□□□□ -0.32
CDK5RAP3-201ENST00000338399 LALBAP00709 142 aa13.08□□□□□ -0.32
CDK5RAP3-201ENST00000338399 PSKH1P11801 424 aa13.08□□□□□ -0.32
CDK5RAP3-201ENST00000338399 ZNF19P17023 458 aa13.08□□□□□ -0.32
CDK5RAP3-201ENST00000338399 OR12D2P58182 307 aa13.08□□□□□ -0.32
CDK5RAP3-201ENST00000338399 ADAM8P78325 824 aa13.08□□□□□ -0.32
CDK5RAP3-201ENST00000338399 HSF2Q03933 536 aa13.08□□□□□ -0.32
CDK5RAP3-201ENST00000338399 LINC00303Q3SY05 128 aa13.08□□□□□ -0.32
CDK5RAP3-201ENST00000338399 AAED1Q7RTV5 226 aa13.08□□□□□ -0.32
CDK5RAP3-201ENST00000338399 ANKRD13BQ86YJ7 626 aa13.08□□□□□ -0.32
CDK5RAP3-201ENST00000338399 KLBQ86Z14 1044 aa13.08□□□□□ -0.32
CDK5RAP3-201ENST00000338399 GLB1L2Q8IW92 636 aa13.08□□□□□ -0.32
CDK5RAP3-201ENST00000338399 SLC26A10Q8NG04 563 aa13.08□□□□□ -0.32
CDK5RAP3-201ENST00000338399 PNPLA2Q96AD5 504 aa13.08□□□□□ -0.32
CDK5RAP3-201ENST00000338399 C4orf36Q96KX1 117 aa13.08□□□□□ -0.32
CDK5RAP3-201ENST00000338399 YIPF3Q9GZM5 350 aa13.08□□□□□ -0.32
CDK5RAP3-201ENST00000338399 PRDM14Q9GZV8 571 aa13.08□□□□□ -0.32
CDK5RAP3-201ENST00000338399 KLHL9Q9P2J3 617 aa13.08□□□□□ -0.32
CDK5RAP3-201ENST00000338399 RCE1Q9Y256 329 aa13.08□□□□□ -0.32
CDK5RAP3-201ENST00000338399 KLHDC2Q9Y2U9 406 aa13.08□□□□□ -0.32
CDK5RAP3-201ENST00000338399 IGKV3D-15A0A087WSY6 115 aa13.07□□□□□ -0.32
CDK5RAP3-201ENST00000338399 PNMA8CA0A1B0GUJ8 204 aa13.07□□□□□ -0.32
CDK5RAP3-201ENST00000338399 A0A1W2PPL8 197 aa13.07□□□□□ -0.32
CDK5RAP3-201ENST00000338399 CCRL2O00421 344 aa13.07□□□□□ -0.32
CDK5RAP3-201ENST00000338399 CRYABP02511 175 aaKnown RBP13.07□□□□□ -0.32
CDK5RAP3-201ENST00000338399 INAQ16352 499 aa13.07□□□□□ -0.32
CDK5RAP3-201ENST00000338399 SSX1Q16384 188 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms