RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 ESX1Q8N693 406 aa5.73□□□□□ -1.49
PRKDC-202ENST00000338368 DEDD2Q8WXF8 326 aa5.73□□□□□ -1.49
PRKDC-202ENST00000338368 ASH2LQ9UBL3 628 aa5.73□□□□□ -1.49
PRKDC-202ENST00000338368 OR52A1Q9UKL2 312 aa5.73□□□□□ -1.49
PRKDC-202ENST00000338368 FOXS1O43638 330 aa5.72□□□□□ -1.49
PRKDC-202ENST00000338368 RBMXL2O75526 392 aaKnown RBP5.72□□□□□ -1.49
PRKDC-202ENST00000338368 F10P00742 488 aa5.72□□□□□ -1.49
PRKDC-202ENST00000338368 ABCD3P28288 659 aa5.72□□□□□ -1.49
PRKDC-202ENST00000338368 FAM199XQ6PEV8 388 aaPredicted RBP5.72□□□□□ -1.49
PRKDC-202ENST00000338368 GIMAP1Q8WWP7 306 aa5.72□□□□□ -1.49
PRKDC-202ENST00000338368 SLC35B4Q969S0 331 aa5.72□□□□□ -1.49
PRKDC-202ENST00000338368 KTI12Q96EK9 354 aaPredicted RBP5.72□□□□□ -1.49
PRKDC-202ENST00000338368 PELI1Q96FA3 418 aa5.72□□□□□ -1.49
PRKDC-202ENST00000338368 VN1R1Q9GZP7 353 aa5.72□□□□□ -1.49
PRKDC-202ENST00000338368 POU2F3Q9UKI9 436 aa5.72□□□□□ -1.49
PRKDC-202ENST00000338368 WRBO00258 174 aa5.72□□□□□ -1.49
PRKDC-202ENST00000338368 SLC43A1O75387 559 aa5.72□□□□□ -1.49
PRKDC-202ENST00000338368 FUT5Q11128 374 aa5.72□□□□□ -1.49
PRKDC-202ENST00000338368 IL10RAQ13651 578 aa5.72□□□□□ -1.49
PRKDC-202ENST00000338368 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.72□□□□□ -1.49
PRKDC-202ENST00000338368 PRTGQ2VWP7 1150 aa5.72□□□□□ -1.49
PRKDC-202ENST00000338368 APOOLQ6UXV4 268 aa5.72□□□□□ -1.49
PRKDC-202ENST00000338368 KIF18BQ86Y91 864 aa5.72□□□□□ -1.49
PRKDC-202ENST00000338368 CCDC74BQ96LY2 380 aa5.72□□□□□ -1.49
PRKDC-202ENST00000338368 PIGQQ9BRB3 760 aa5.72□□□□□ -1.49
PRKDC-202ENST00000338368 ZNF471Q9BX82 626 aaPredicted RBP5.72□□□□□ -1.49
PRKDC-202ENST00000338368 EIF1BO60739 113 aaKnown RBP5.72□□□□□ -1.49
PRKDC-202ENST00000338368 ZNF74Q16587 644 aa5.72□□□□□ -1.49
PRKDC-202ENST00000338368 LANCL3Q6ZV70 420 aa5.72□□□□□ -1.49
PRKDC-202ENST00000338368 PTPMT1Q8WUK0 201 aaPredicted RBP5.72□□□□□ -1.49
PRKDC-202ENST00000338368 FGGYQ96C11 551 aa5.72□□□□□ -1.49
PRKDC-202ENST00000338368 FBXL3Q9UKT7 428 aa5.72□□□□□ -1.49
PRKDC-202ENST00000338368 BRWD1Q9NSI6 2320 aa5.72□□□□□ -1.49
PRKDC-202ENST00000338368 MRPL33O75394 65 aaKnown RBP5.72□□□□□ -1.49
PRKDC-202ENST00000338368 TFP02787 698 aa5.72□□□□□ -1.49
PRKDC-202ENST00000338368 CALCBP10092 127 aa5.72□□□□□ -1.49
PRKDC-202ENST00000338368 SFTPCP11686 197 aa5.72□□□□□ -1.49
PRKDC-202ENST00000338368 BCKDHBP21953 392 aa5.72□□□□□ -1.49
PRKDC-202ENST00000338368 CRYBB2P43320 205 aa5.72□□□□□ -1.49
PRKDC-202ENST00000338368 OTPQ5XKR4 325 aa5.72□□□□□ -1.49
PRKDC-202ENST00000338368 DGAT2L6Q6ZPD8 337 aa5.72□□□□□ -1.49
PRKDC-202ENST00000338368 TSEN54Q7Z6J9 526 aaKnown RBP5.72□□□□□ -1.49
PRKDC-202ENST00000338368 LRRC18Q8N456 261 aa5.72□□□□□ -1.49
PRKDC-202ENST00000338368 SCARF2Q96GP6 870 aaPredicted RBP5.72□□□□□ -1.49
PRKDC-202ENST00000338368 WFDC6Q9BQY6 131 aa5.72□□□□□ -1.49
PRKDC-202ENST00000338368 HCAR1Q9BXC0 346 aa5.72□□□□□ -1.49
PRKDC-202ENST00000338368 STEAP1Q9UHE8 339 aa5.72□□□□□ -1.49
PRKDC-202ENST00000338368 A0A0G2JMP0 313 aa5.72□□□□□ -1.49
PRKDC-202ENST00000338368 KANTRA0A1W2PQU2 76 aa5.72□□□□□ -1.49
PRKDC-202ENST00000338368 PRSS37A4D1T9 235 aa5.72□□□□□ -1.49
PRKDC-202ENST00000338368 EEF1E1-BLOC1S5C9J1V9 151 aa5.72□□□□□ -1.49
PRKDC-202ENST00000338368 IMPA2O14732 288 aa5.72□□□□□ -1.49
PRKDC-202ENST00000338368 SLC22A5O76082 557 aa5.72□□□□□ -1.49
PRKDC-202ENST00000338368 CT45A8P0DMV1 189 aa5.72□□□□□ -1.49
PRKDC-202ENST00000338368 CT45A9P0DMV2 189 aa5.72□□□□□ -1.49
PRKDC-202ENST00000338368 APEHP13798 732 aaKnown RBP5.72□□□□□ -1.49
PRKDC-202ENST00000338368 ENPP1P22413 925 aa5.72□□□□□ -1.49
PRKDC-202ENST00000338368 CT45A2Q5DJT8 189 aa5.72□□□□□ -1.49
PRKDC-202ENST00000338368 AAED1Q7RTV5 226 aa5.72□□□□□ -1.49
PRKDC-202ENST00000338368 OR4M2Q8NGB6 313 aa5.72□□□□□ -1.49
PRKDC-202ENST00000338368 VSTM2LQ96N03 204 aa5.72□□□□□ -1.49
PRKDC-202ENST00000338368 ARL6Q9H0F7 186 aa5.72□□□□□ -1.49
PRKDC-202ENST00000338368 RANGRFQ9HD47 186 aaPredicted RBP5.72□□□□□ -1.49
PRKDC-202ENST00000338368 MED29Q9NX70 200 aa5.72□□□□□ -1.49
PRKDC-202ENST00000338368 RDH8Q9NYR8 311 aa5.72□□□□□ -1.49
PRKDC-202ENST00000338368 ZNF736B4DX44 427 aaPredicted RBP5.72□□□□□ -1.49
PRKDC-202ENST00000338368 HSPA12AO43301 675 aa5.72□□□□□ -1.49
PRKDC-202ENST00000338368 VAMP5O95183 116 aa5.72□□□□□ -1.49
PRKDC-202ENST00000338368 HTR2CP28335 458 aa5.72□□□□□ -1.49
PRKDC-202ENST00000338368 ZNF141Q15928 474 aa5.72□□□□□ -1.49
PRKDC-202ENST00000338368 GLB1L2Q8IW92 636 aa5.72□□□□□ -1.49
PRKDC-202ENST00000338368 SLC22A18ASQ8N1D0 253 aa5.72□□□□□ -1.49
PRKDC-202ENST00000338368 TTC9Q92623 222 aa5.72□□□□□ -1.49
PRKDC-202ENST00000338368 PTP4A1Q93096 173 aa5.72□□□□□ -1.49
PRKDC-202ENST00000338368 CCDC120Q96HB5 630 aa5.72□□□□□ -1.49
PRKDC-202ENST00000338368 SIGLEC11Q96RL6 698 aa5.72□□□□□ -1.49
PRKDC-202ENST00000338368 FBXO9Q9UK97 447 aaPredicted RBP5.72□□□□□ -1.49
PRKDC-202ENST00000338368 A0A1W2PNR3 127 aa5.72□□□□□ -1.49
PRKDC-202ENST00000338368 WNT1P04628 370 aa5.72□□□□□ -1.49
PRKDC-202ENST00000338368 NPR2P20594 1047 aa5.72□□□□□ -1.49
PRKDC-202ENST00000338368 C11orf91Q3C1V1 193 aa5.72□□□□□ -1.49
PRKDC-202ENST00000338368 COX15Q7KZN9 410 aa5.72□□□□□ -1.49
PRKDC-202ENST00000338368 FAM3DQ96BQ1 224 aa5.72□□□□□ -1.49
PRKDC-202ENST00000338368 ANKRD10Q9NXR5 420 aa5.72□□□□□ -1.49
PRKDC-202ENST00000338368 RHBDD3Q9Y3P4 386 aa5.72□□□□□ -1.49
PRKDC-202ENST00000338368 ABCA1O95477 2261 aa5.72□□□□□ -1.49
PRKDC-202ENST00000338368 A6NL46 340 aa5.72□□□□□ -1.49
PRKDC-202ENST00000338368 FKBP2P26885 142 aaKnown RBP5.72□□□□□ -1.49
PRKDC-202ENST00000338368 SELENBP1Q13228 472 aa5.72□□□□□ -1.49
PRKDC-202ENST00000338368 CHCHD2P9Q5T1J5 151 aaPredicted RBP5.72□□□□□ -1.49
PRKDC-202ENST00000338368 TMEM53Q6P2H8 277 aa5.72□□□□□ -1.49
PRKDC-202ENST00000338368 LSMEM1Q8N8F7 131 aa5.72□□□□□ -1.49
PRKDC-202ENST00000338368 OR5M1Q8NGP8 315 aa5.72□□□□□ -1.49
PRKDC-202ENST00000338368 ICAM5Q9UMF0 924 aa5.72□□□□□ -1.49
PRKDC-202ENST00000338368 A6NCN8 305 aa5.72□□□□□ -1.49
PRKDC-202ENST00000338368 GGT3PA6NGU5 568 aa5.72□□□□□ -1.49
PRKDC-202ENST00000338368 ZNF850A8MQ14 1090 aa5.72□□□□□ -1.49
PRKDC-202ENST00000338368 CYB5BO43169 146 aa5.72□□□□□ -1.49
PRKDC-202ENST00000338368 HRO43593 1189 aa5.72□□□□□ -1.49
PRKDC-202ENST00000338368 OR2J2O76002 312 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms