RNA–Protein interactions for RNA: ENST00000334536.12

SPNS1-203, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 1 (best) BASIC

Gene SPNS1, Length 2,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-203ENST00000334536 PRICKLE4Q2TBC4 344 aa18.76■□□□□ 0.59
SPNS1-203ENST00000334536 TMEM244Q5VVB8 128 aa18.76■□□□□ 0.59
SPNS1-203ENST00000334536 GLT8D1Q68CQ7 371 aa18.76■□□□□ 0.59
SPNS1-203ENST00000334536 CCL4L1Q8NHW4 92 aa18.76■□□□□ 0.59
SPNS1-203ENST00000334536 STOML3Q8TAV4 291 aa18.76■□□□□ 0.59
SPNS1-203ENST00000334536 FGF14Q92915 247 aa18.76■□□□□ 0.59
SPNS1-203ENST00000334536 NDC1Q9BTX1 674 aa18.76■□□□□ 0.59
SPNS1-203ENST00000334536 IGFLR1Q9H665 355 aa18.76■□□□□ 0.59
SPNS1-203ENST00000334536 CCDC86Q9H6F5 360 aaKnown RBP18.76■□□□□ 0.59
SPNS1-203ENST00000334536 TMEM185BQ9H7F4 350 aa18.76■□□□□ 0.59
SPNS1-203ENST00000334536 MED20Q9H944 212 aa18.76■□□□□ 0.59
SPNS1-203ENST00000334536 ACKR4Q9NPB9 350 aa18.76■□□□□ 0.59
SPNS1-203ENST00000334536 RCC2Q9P258 522 aaKnown RBP18.76■□□□□ 0.59
SPNS1-203ENST00000334536 SIRT4Q9Y6E7 314 aaPredicted RBP18.76■□□□□ 0.59
SPNS1-203ENST00000334536 ATG2AQ2TAZ0 1938 aa18.76■□□□□ 0.59
SPNS1-203ENST00000334536 TRBV23OR9-2A0A075B6M9 112 aa18.76■□□□□ 0.59
SPNS1-203ENST00000334536 RIIAD1A6NNX1 92 aa18.76■□□□□ 0.59
SPNS1-203ENST00000334536 CYR61O00622 381 aa18.76■□□□□ 0.59
SPNS1-203ENST00000334536 OIP5O43482 229 aa18.76■□□□□ 0.59
SPNS1-203ENST00000334536 OR2T1O43869 369 aa18.76■□□□□ 0.59
SPNS1-203ENST00000334536 FGF17O60258 216 aa18.76■□□□□ 0.59
SPNS1-203ENST00000334536 APEHP13798 732 aaKnown RBP18.76■□□□□ 0.59
SPNS1-203ENST00000334536 SDHBP21912 280 aa18.76■□□□□ 0.59
SPNS1-203ENST00000334536 ID2Q02363 134 aa18.76■□□□□ 0.59
SPNS1-203ENST00000334536 MGAT2Q10469 447 aa18.76■□□□□ 0.59
SPNS1-203ENST00000334536 COL9A2Q14055 689 aaPredicted RBP18.76■□□□□ 0.59
SPNS1-203ENST00000334536 C9orf50Q5SZB4 431 aa18.76■□□□□ 0.59
SPNS1-203ENST00000334536 DCAF12L2Q5VW00 463 aa18.76■□□□□ 0.59
SPNS1-203ENST00000334536 TNFAIP8L1Q8WVP5 186 aa18.76■□□□□ 0.59
SPNS1-203ENST00000334536 BMFQ96LC9 184 aa18.76■□□□□ 0.59
SPNS1-203ENST00000334536 HAO2Q9NYQ3 351 aa18.76■□□□□ 0.59
SPNS1-203ENST00000334536 MRPL15Q9P015 296 aaKnown RBP18.76■□□□□ 0.59
SPNS1-203ENST00000334536 TP53TG5Q9Y2B4 290 aa18.76■□□□□ 0.59
SPNS1-203ENST00000334536 DOCK8Q8NF50 2099 aa18.75■□□□□ 0.59
SPNS1-203ENST00000334536 FAM221BA6H8Z2 402 aa18.75■□□□□ 0.59
SPNS1-203ENST00000334536 PEX12O00623 359 aa18.75■□□□□ 0.59
SPNS1-203ENST00000334536 CD2P06729 351 aa18.75■□□□□ 0.59
SPNS1-203ENST00000334536 CMTM4Q8IZR5 234 aa18.75■□□□□ 0.59
SPNS1-203ENST00000334536 OR10H4Q8NGA5 316 aa18.75■□□□□ 0.59
SPNS1-203ENST00000334536 HOXB13Q92826 284 aaPredicted RBP18.75■□□□□ 0.59
SPNS1-203ENST00000334536 C14orf79Q96F83 325 aa18.75■□□□□ 0.59
SPNS1-203ENST00000334536 NRIP2Q9BQI9 281 aa18.75■□□□□ 0.59
SPNS1-203ENST00000334536 ZNF471Q9BX82 626 aaPredicted RBP18.75■□□□□ 0.59
SPNS1-203ENST00000334536 TSPAN10Q9H1Z9 355 aaPredicted RBP18.75■□□□□ 0.59
SPNS1-203ENST00000334536 CERS4Q9HA82 394 aa18.75■□□□□ 0.59
SPNS1-203ENST00000334536 TREM1Q9NP99 234 aa18.75■□□□□ 0.59
SPNS1-203ENST00000334536 TMEM74BQ9NUR3 256 aa18.75■□□□□ 0.59
SPNS1-203ENST00000334536 FBXO34Q9NWN3 711 aa18.75■□□□□ 0.59
SPNS1-203ENST00000334536 CHD9Q3L8U1 2897 aa18.75■□□□□ 0.59
SPNS1-203ENST00000334536 GOLGA4Q13439 2230 aaKnown RBP18.75■□□□□ 0.59
SPNS1-203ENST00000334536 PYCARD-AS1I3L0S3 204 aa18.74■□□□□ 0.59
SPNS1-203ENST00000334536 NKX2-2O95096 273 aa18.74■□□□□ 0.59
SPNS1-203ENST00000334536 GABRA3P34903 492 aa18.74■□□□□ 0.59
SPNS1-203ENST00000334536 RBM34P42696 430 aaKnown RBP18.74■□□□□ 0.59
SPNS1-203ENST00000334536 PJVKQ0ZLH3 352 aa18.74■□□□□ 0.59
SPNS1-203ENST00000334536 CSRP2Q16527 193 aa18.74■□□□□ 0.59
SPNS1-203ENST00000334536 C2orf68Q2NKX9 166 aa18.74■□□□□ 0.59
SPNS1-203ENST00000334536 C11orf88Q6PI97 169 aa18.74■□□□□ 0.59
SPNS1-203ENST00000334536 TMEM184AQ6ZMB5 413 aa18.74■□□□□ 0.59
SPNS1-203ENST00000334536 ACOT7LQ6ZUV0 252 aa18.74■□□□□ 0.59
SPNS1-203ENST00000334536 RNF44Q7L0R7 432 aa18.74■□□□□ 0.59
SPNS1-203ENST00000334536 OR10H5Q8NGA6 315 aa18.74■□□□□ 0.59
SPNS1-203ENST00000334536 OR4D9Q8NGE8 314 aa18.74■□□□□ 0.59
SPNS1-203ENST00000334536 OR52B4Q8NGK2 314 aa18.74■□□□□ 0.59
SPNS1-203ENST00000334536 OR13C2Q8NGS9 318 aa18.74■□□□□ 0.59
SPNS1-203ENST00000334536 OR10G6Q8NH81 332 aa18.74■□□□□ 0.59
SPNS1-203ENST00000334536 BAHD1Q8TBE0 780 aaPredicted RBP18.74■□□□□ 0.59
SPNS1-203ENST00000334536 CTHRC1Q96CG8 243 aa18.74■□□□□ 0.59
SPNS1-203ENST00000334536 RPP25Q9BUL9 199 aaKnown RBP18.74■□□□□ 0.59
SPNS1-203ENST00000334536 HCAR1Q9BXC0 346 aa18.74■□□□□ 0.59
SPNS1-203ENST00000334536 ADAM19Q9H013 955 aa18.74■□□□□ 0.59
SPNS1-203ENST00000334536 SEC61A2Q9H9S3 476 aa18.74■□□□□ 0.59
SPNS1-203ENST00000334536 SCN3AQ9NY46 2000 aa18.74■□□□□ 0.59
SPNS1-203ENST00000334536 ZC3H12DA2A288 527 aaKnown RBP18.74■□□□□ 0.59
SPNS1-203ENST00000334536 GGT3PA6NGU5 568 aa18.74■□□□□ 0.59
SPNS1-203ENST00000334536 ZNF860A6NHJ4 632 aa18.74■□□□□ 0.59
SPNS1-203ENST00000334536 ACOD1A6NK06 481 aa18.74■□□□□ 0.59
SPNS1-203ENST00000334536 LDB3O75112 727 aa18.74■□□□□ 0.59
SPNS1-203ENST00000334536 KLF8O95600 359 aaPredicted RBP18.74■□□□□ 0.59
SPNS1-203ENST00000334536 SBK2P0C263 348 aa18.74■□□□□ 0.59
SPNS1-203ENST00000334536 NDUFB7P17568 137 aa18.74■□□□□ 0.59
SPNS1-203ENST00000334536 FUT1P19526 365 aa18.74■□□□□ 0.59
SPNS1-203ENST00000334536 PTNP21246 168 aa18.74■□□□□ 0.59
SPNS1-203ENST00000334536 HNRNPA2B1P22626 353 aaKnown RBP18.74■□□□□ 0.59
SPNS1-203ENST00000334536 SLC2A5P22732 501 aa18.74■□□□□ 0.59
SPNS1-203ENST00000334536 NFYBP25208 207 aa18.74■□□□□ 0.59
SPNS1-203ENST00000334536 ACTC1P68032 377 aa18.74■□□□□ 0.59
SPNS1-203ENST00000334536 ACTA1P68133 377 aa18.74■□□□□ 0.59
SPNS1-203ENST00000334536 POU4F2Q12837 409 aa18.74■□□□□ 0.59
SPNS1-203ENST00000334536 GPR18Q14330 331 aa18.74■□□□□ 0.59
SPNS1-203ENST00000334536 HMGN3Q15651 99 aa18.74■□□□□ 0.59
SPNS1-203ENST00000334536 ATPAF1Q5TC12 328 aaPredicted RBP18.74■□□□□ 0.59
SPNS1-203ENST00000334536 ARL9Q6T311 187 aa18.74■□□□□ 0.59
SPNS1-203ENST00000334536 THSD4Q6ZMP0 1018 aa18.74■□□□□ 0.59
SPNS1-203ENST00000334536 DNM1P46Q6ZS02 220 aa18.74■□□□□ 0.59
SPNS1-203ENST00000334536 SLC29A4Q7RTT9 530 aa18.74■□□□□ 0.59
SPNS1-203ENST00000334536 GTPBP8Q8N3Z3 284 aaPredicted RBP18.74■□□□□ 0.59
SPNS1-203ENST00000334536 SDR9C7Q8NEX9 313 aa18.74■□□□□ 0.59
SPNS1-203ENST00000334536 OR6N1Q8NGY5 312 aa18.74■□□□□ 0.59
SPNS1-203ENST00000334536 OR4C6Q8NH72 309 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms