RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 MTO1Q9Y2Z2 717 aaKnown RBP1.19□□□□□ -2.22
LINC00643-201ENST00000334389 SBDSQ9Y3A5 250 aaKnown RBP eCLIP1.19□□□□□ -2.22
LINC00643-201ENST00000334389 CHST2Q9Y4C5 530 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 DTNAQ9Y4J8 743 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 YTHDF2Q9Y5A9 579 aaKnown RBP1.19□□□□□ -2.22
LINC00643-201ENST00000334389 NUBP2Q9Y5Y2 271 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 TENM2Q9NT68 2774 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 SCN3AQ9NY46 2000 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 A0A0G2JMM0 328 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 IQANK1A0A1B0GTG1 560 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 A0A1W2PPB8 328 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 A0A1W2PRS3 328 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 OR2M5A3KFT3 312 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 A8MUA0 341 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 KIR3DP1A8MWS1 328 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 ZNF99A8MXY4 864 aaPredicted RBP1.19□□□□□ -2.22
LINC00643-201ENST00000334389 FAM72CH0Y354 149 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 NR5A2O00482 541 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 RGS13O14921 159 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 BET1O15155 118 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 SIGLEC5O15389 551 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 KIAA0513O60268 411 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 MTRF1O75570 445 aaKnown RBP1.19□□□□□ -2.22
LINC00643-201ENST00000334389 IPO7O95373 1038 aaKnown RBP1.19□□□□□ -2.22
LINC00643-201ENST00000334389 IGLV3-1P01715 115 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 CPMP14384 443 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 HOXB9P17482 250 aaPredicted RBP1.19□□□□□ -2.22
LINC00643-201ENST00000334389 UGT1A6P19224 532 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 KDELR1P24390 212 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 PSMB8P28062 276 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 CCR7P32248 378 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 CD80P33681 288 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 PMELP40967 661 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 RBM34P42696 430 aaKnown RBP1.19□□□□□ -2.22
LINC00643-201ENST00000334389 RANBP1P43487 201 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 NSFP46459 744 aaKnown RBP1.19□□□□□ -2.22
LINC00643-201ENST00000334389 RPS6KA3P51812 740 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 CDH13P55290 713 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 FOXA1P55317 472 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 WNT3P56703 355 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 PPP1CAP62136 330 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 RPS29P62273 56 aaKnown RBP1.19□□□□□ -2.22
LINC00643-201ENST00000334389 CRADDP78560 199 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 GPR68Q15743 365 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 NDUFA5Q16718 116 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 FAM83EQ2M2I3 478 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 SPIN4Q56A73 249 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 TFDP3Q5H9I0 405 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 CTSL3PQ5NE16 218 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 FAM72AQ5TYM5 149 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 PVRIGQ6DKI7 326 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 FAM72DQ6L9T8 149 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 FIP1L1Q6UN15 594 aaKnown RBP1.19□□□□□ -2.22
LINC00643-201ENST00000334389 SLC16A14Q7RTX9 510 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 FAM72BQ86X60 149 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 RNF130Q86XS8 419 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 TGIF2LXQ8IUE1 241 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 SAXO1Q8IYX7 474 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 RNF113BQ8IZP6 322 aaKnown RBP1.19□□□□□ -2.22
LINC00643-201ENST00000334389 SVOPLQ8N434 492 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 CDRT4Q8N9R6 151 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 OR52B6Q8NGF0 335 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 OR52L1Q8NGH7 329 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 OR13J1Q8NGT2 312 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 RDH11Q8TC12 318 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 CLEC4CQ8WTT0 213 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 ZNF480Q8WV37 535 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 OMA1Q96E52 524 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 CDKN2AIPNLQ96HQ2 116 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 PEBP4Q96S96 227 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 ZNF382Q96SR6 550 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 PCDHB18PQ96TA0 734 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 ATF6BQ99941 703 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 CCDC106Q9BWC9 280 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 PPIL3Q9H2H8 161 aaKnown RBP1.19□□□□□ -2.22
LINC00643-201ENST00000334389 OR51J1Q9H342 316 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 LDAHQ9H6V9 325 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 IPPKQ9H8X2 491 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 RAB9BQ9NP90 201 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 ABHD10Q9NUJ1 306 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 PAK5Q9P286 719 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 WIPI2Q9Y4P8 454 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 ZNF780BQ9Y6R6 833 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 MAU2Q9Y6X3 613 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 DNAH12Q6ZR08 3092 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 FAM95CA0A1B0GW59 222 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 CASC3O15234 703 aaKnown RBP1.19□□□□□ -2.22
LINC00643-201ENST00000334389 TEX33O43247 280 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 SYNGR1O43759 233 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 SCO2O43819 266 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 KDM4BO94953 1096 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 BAG2O95816 211 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 TXNDC12O95881 172 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 ADAP00813 363 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 GYPCP04921 128 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 SERPIND1P05546 499 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 FGF4P08620 206 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 TPM1P09493 284 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 TFPTP0C1Z6 253 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 MT1HL1P0DM35 61 aa1.19□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms