RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 hCG_1807616A0A1W2PRN6 198 aa11.14□□□□□ -0.63
VPS33B-201ENST00000333371 SHISA7A6NL88 538 aa11.14□□□□□ -0.63
VPS33B-201ENST00000333371 C17orf105B2RV13 164 aa11.14□□□□□ -0.63
VPS33B-201ENST00000333371 CTAG2O75638 210 aa11.14□□□□□ -0.63
VPS33B-201ENST00000333371 OR2A4O95047 310 aa11.14□□□□□ -0.63
VPS33B-201ENST00000333371 HLA-DQA2P01906 255 aa11.14□□□□□ -0.63
VPS33B-201ENST00000333371 CD3DP04234 171 aa11.14□□□□□ -0.63
VPS33B-201ENST00000333371 UBL4AP11441 157 aa11.14□□□□□ -0.63
VPS33B-201ENST00000333371 GTF2F2P13984 249 aa11.14□□□□□ -0.63
VPS33B-201ENST00000333371 CPN1P15169 458 aa11.14□□□□□ -0.63
VPS33B-201ENST00000333371 ALOX5APP20292 161 aa11.14□□□□□ -0.63
VPS33B-201ENST00000333371 BLKP51451 505 aa11.14□□□□□ -0.63
VPS33B-201ENST00000333371 PRTGQ2VWP7 1150 aa11.14□□□□□ -0.63
VPS33B-201ENST00000333371 NKAIN2Q5VXU1 208 aa11.14□□□□□ -0.63
VPS33B-201ENST00000333371 TMEM205Q6UW68 189 aa11.14□□□□□ -0.63
VPS33B-201ENST00000333371 CHRDL2Q6WN34 429 aa11.14□□□□□ -0.63
VPS33B-201ENST00000333371 TSTD1Q8NFU3 115 aa11.14□□□□□ -0.63
VPS33B-201ENST00000333371 FAM174AQ8TBP5 190 aa11.14□□□□□ -0.63
VPS33B-201ENST00000333371 OR2A7Q96R45 310 aa11.14□□□□□ -0.63
VPS33B-201ENST00000333371 ARL6Q9H0F7 186 aa11.14□□□□□ -0.63
VPS33B-201ENST00000333371 ZMAT3Q9HA38 289 aaKnown RBP11.14□□□□□ -0.63
VPS33B-201ENST00000333371 OPN4Q9UHM6 478 aa11.14□□□□□ -0.63
VPS33B-201ENST00000333371 GGT3PA6NGU5 568 aa11.14□□□□□ -0.63
VPS33B-201ENST00000333371 H7C417 338 aa11.14□□□□□ -0.63
VPS33B-201ENST00000333371 TSPAN4O14817 238 aa11.14□□□□□ -0.63
VPS33B-201ENST00000333371 SIGLEC5O15389 551 aa11.14□□□□□ -0.63
VPS33B-201ENST00000333371 XRCC3O43542 346 aa11.14□□□□□ -0.63
VPS33B-201ENST00000333371 PNPP00491 289 aa11.14□□□□□ -0.63
VPS33B-201ENST00000333371 LPLP06858 475 aa11.14□□□□□ -0.63
VPS33B-201ENST00000333371 NMBP08949 121 aa11.14□□□□□ -0.63
VPS33B-201ENST00000333371 SLC25A1P53007 311 aa11.14□□□□□ -0.63
VPS33B-201ENST00000333371 RAP2BP61225 183 aa11.14□□□□□ -0.63
VPS33B-201ENST00000333371 SIGLEC14Q08ET2 396 aa11.14□□□□□ -0.63
VPS33B-201ENST00000333371 FUT7Q11130 342 aa11.14□□□□□ -0.63
VPS33B-201ENST00000333371 MEP1BQ16820 701 aa11.14□□□□□ -0.63
VPS33B-201ENST00000333371 ISXQ2M1V0 245 aa11.14□□□□□ -0.63
VPS33B-201ENST00000333371 TUSC1Q2TAM9 212 aa11.14□□□□□ -0.63
VPS33B-201ENST00000333371 FNDC7Q5VTL7 733 aa11.14□□□□□ -0.63
VPS33B-201ENST00000333371 GPAT4Q86UL3 456 aa11.14□□□□□ -0.63
VPS33B-201ENST00000333371 ZNF227Q86WZ6 799 aa11.14□□□□□ -0.63
VPS33B-201ENST00000333371 ADGRG3Q86Y34 549 aa11.14□□□□□ -0.63
VPS33B-201ENST00000333371 FAM160A2Q8N612 972 aaPredicted RBP11.14□□□□□ -0.63
VPS33B-201ENST00000333371 SLC25A36Q96CQ1 311 aa11.14□□□□□ -0.63
VPS33B-201ENST00000333371 GAL3ST4Q96RP7 486 aa11.14□□□□□ -0.63
VPS33B-201ENST00000333371 TPSD1Q9BZJ3 242 aa11.14□□□□□ -0.63
VPS33B-201ENST00000333371 OR8D2Q9GZM6 311 aa11.14□□□□□ -0.63
VPS33B-201ENST00000333371 GPN1Q9HCN4 374 aaPredicted RBP11.14□□□□□ -0.63
VPS33B-201ENST00000333371 TMEM138Q9NPI0 162 aa11.14□□□□□ -0.63
VPS33B-201ENST00000333371 MTFP1Q9UDX5 166 aa11.14□□□□□ -0.63
VPS33B-201ENST00000333371 STEAP1Q9UHE8 339 aa11.14□□□□□ -0.63
VPS33B-201ENST00000333371 TRBV5-7A0A0A0MS05 114 aa11.13□□□□□ -0.63
VPS33B-201ENST00000333371 IGLV3-19P01714 112 aa11.13□□□□□ -0.63
VPS33B-201ENST00000333371 SEC61A1P61619 476 aaKnown RBP11.13□□□□□ -0.63
VPS33B-201ENST00000333371 COL19A1Q14993 1142 aa11.13□□□□□ -0.63
VPS33B-201ENST00000333371 B3GNTL1Q67FW5 361 aaPredicted RBP11.13□□□□□ -0.63
VPS33B-201ENST00000333371 TMUB2Q71RG4 321 aa11.13□□□□□ -0.63
VPS33B-201ENST00000333371 ZNF595Q8IYB9 648 aa11.13□□□□□ -0.63
VPS33B-201ENST00000333371 ELOVL3Q9HB03 270 aa11.13□□□□□ -0.63
VPS33B-201ENST00000333371 MRPS33Q9Y291 106 aaKnown RBP11.13□□□□□ -0.63
VPS33B-201ENST00000333371 CABIN1Q9Y6J0 2220 aa11.13□□□□□ -0.63
VPS33B-201ENST00000333371 CLDN4O14493 209 aa11.13□□□□□ -0.63
VPS33B-201ENST00000333371 NUPL2O15504 423 aaKnown RBP11.13□□□□□ -0.63
VPS33B-201ENST00000333371 ZNF254O75437 659 aa11.13□□□□□ -0.63
VPS33B-201ENST00000333371 UTS2O95399 124 aa11.13□□□□□ -0.63
VPS33B-201ENST00000333371 IGF2P01344 180 aa11.13□□□□□ -0.63
VPS33B-201ENST00000333371 MAPK3P27361 379 aaPredicted RBP11.13□□□□□ -0.63
VPS33B-201ENST00000333371 EPHA4P54764 986 aa11.13□□□□□ -0.63
VPS33B-201ENST00000333371 PSMD4P55036 377 aaKnown RBP11.13□□□□□ -0.63
VPS33B-201ENST00000333371 IGLV3-21P80748 117 aaPredicted RBP11.13□□□□□ -0.63
VPS33B-201ENST00000333371 DHODHQ02127 395 aa11.13□□□□□ -0.63
VPS33B-201ENST00000333371 BTN1A1Q13410 526 aa11.13□□□□□ -0.63
VPS33B-201ENST00000333371 C2orf76Q3KRA6 126 aa11.13□□□□□ -0.63
VPS33B-201ENST00000333371 PRAMEF17Q5VTA0 474 aa11.13□□□□□ -0.63
VPS33B-201ENST00000333371 EID2Q8N6I1 236 aa11.13□□□□□ -0.63
VPS33B-201ENST00000333371 GPR148Q8TDV2 347 aa11.13□□□□□ -0.63
VPS33B-201ENST00000333371 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.13□□□□□ -0.63
VPS33B-201ENST00000333371 TSLPQ969D9 159 aa11.13□□□□□ -0.63
VPS33B-201ENST00000333371 C4orf45Q96LM5 186 aa11.13□□□□□ -0.63
VPS33B-201ENST00000333371 KLHL15Q96M94 604 aa11.13□□□□□ -0.63
VPS33B-201ENST00000333371 INTS14Q96SY0 518 aa11.13□□□□□ -0.63
VPS33B-201ENST00000333371 COMMD4Q9H0A8 199 aa11.13□□□□□ -0.63
VPS33B-201ENST00000333371 ETV7Q9Y603 341 aa11.13□□□□□ -0.63
VPS33B-201ENST00000333371 A0A1W2PPC4 97 aa11.12□□□□□ -0.63
VPS33B-201ENST00000333371 CDK2AP1O14519 115 aa11.12□□□□□ -0.63
VPS33B-201ENST00000333371 ZNF264O43296 627 aa11.12□□□□□ -0.63
VPS33B-201ENST00000333371 MBTPS2O43462 519 aa11.12□□□□□ -0.63
VPS33B-201ENST00000333371 ICOSLGO75144 302 aa11.12□□□□□ -0.63
VPS33B-201ENST00000333371 HIST1H2ABP04908 130 aa11.12□□□□□ -0.63
VPS33B-201ENST00000333371 SRFP11831 508 aa11.12□□□□□ -0.63
VPS33B-201ENST00000333371 ATF4P18848 351 aaPredicted RBP11.12□□□□□ -0.63
VPS33B-201ENST00000333371 S100A11P31949 105 aa11.12□□□□□ -0.63
VPS33B-201ENST00000333371 GFERP55789 205 aa11.12□□□□□ -0.63
VPS33B-201ENST00000333371 RBMS2Q15434 407 aaKnown RBP11.12□□□□□ -0.63
VPS33B-201ENST00000333371 HIST3H2AQ7L7L0 130 aa11.12□□□□□ -0.63
VPS33B-201ENST00000333371 SYT13Q7L8C5 426 aa11.12□□□□□ -0.63
VPS33B-201ENST00000333371 PRSS42Q7Z5A4 293 aa11.12□□□□□ -0.63
VPS33B-201ENST00000333371 STPG2Q8N412 459 aa11.12□□□□□ -0.63
VPS33B-201ENST00000333371 DEFB119Q8N690 84 aa11.12□□□□□ -0.63
VPS33B-201ENST00000333371 HIST1H2ACQ93077 130 aa11.12□□□□□ -0.63
VPS33B-201ENST00000333371 UTP23Q9BRU9 249 aaKnown RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms