RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 NXNL2Q5VZ03 156 aa13.6□□□□□ -0.23
PDLIM5-202ENST00000318007 AHSA2Q719I0 299 aa13.6□□□□□ -0.23
PDLIM5-202ENST00000318007 BTLAQ7Z6A9 289 aa13.6□□□□□ -0.23
PDLIM5-202ENST00000318007 OR51G2Q8NGK0 314 aa13.6□□□□□ -0.23
PDLIM5-202ENST00000318007 TRUB1Q8WWH5 349 aaKnown RBP13.6□□□□□ -0.23
PDLIM5-202ENST00000318007 RBP7Q96R05 134 aa13.6□□□□□ -0.23
PDLIM5-202ENST00000318007 DDOQ99489 341 aa13.6□□□□□ -0.23
PDLIM5-202ENST00000318007 TBX5Q99593 518 aa13.6□□□□□ -0.23
PDLIM5-202ENST00000318007 SLCO5A1Q9H2Y9 848 aa13.6□□□□□ -0.23
PDLIM5-202ENST00000318007 NPIPB13A6NJU9 1138 aa13.6□□□□□ -0.23
PDLIM5-202ENST00000318007 NPIPB4C9JG80 1138 aa13.6□□□□□ -0.23
PDLIM5-202ENST00000318007 SLC1A7O00341 560 aa13.6□□□□□ -0.23
PDLIM5-202ENST00000318007 SELENOFO60613 162 aa13.6□□□□□ -0.23
PDLIM5-202ENST00000318007 EEF1B2P24534 225 aaKnown RBP13.6□□□□□ -0.23
PDLIM5-202ENST00000318007 PTGER4P35408 488 aa13.6□□□□□ -0.23
PDLIM5-202ENST00000318007 ATP6V1E1P36543 226 aa13.6□□□□□ -0.23
PDLIM5-202ENST00000318007 SNRPGP62308 76 aaKnown RBP13.6□□□□□ -0.23
PDLIM5-202ENST00000318007 ROR2Q01974 943 aaKnown RBP13.6□□□□□ -0.23
PDLIM5-202ENST00000318007 ZNF91Q05481 1191 aa13.6□□□□□ -0.23
PDLIM5-202ENST00000318007 CEACAM16Q2WEN9 425 aa13.6□□□□□ -0.23
PDLIM5-202ENST00000318007 C6orf141Q5SZD1 244 aa13.6□□□□□ -0.23
PDLIM5-202ENST00000318007 OR2A2Q6IF42 318 aa13.6□□□□□ -0.23
PDLIM5-202ENST00000318007 LRRC18Q8N456 261 aa13.6□□□□□ -0.23
PDLIM5-202ENST00000318007 FAM26EQ8N5C1 309 aa13.6□□□□□ -0.23
PDLIM5-202ENST00000318007 ALG12Q9BV10 488 aa13.6□□□□□ -0.23
PDLIM5-202ENST00000318007 VSX1Q9NZR4 365 aaPredicted RBP13.6□□□□□ -0.23
PDLIM5-202ENST00000318007 FOXD3Q9UJU5 478 aaPredicted RBP13.6□□□□□ -0.23
PDLIM5-202ENST00000318007 B9D1Q9UPM9 204 aa13.6□□□□□ -0.23
PDLIM5-202ENST00000318007 RCE1Q9Y256 329 aa13.6□□□□□ -0.23
PDLIM5-202ENST00000318007 POLEQ07864 2286 aa13.59□□□□□ -0.23
PDLIM5-202ENST00000318007 A0A096LPE4 126 aa13.59□□□□□ -0.23
PDLIM5-202ENST00000318007 A0A1W2PPZ6 126 aa13.59□□□□□ -0.23
PDLIM5-202ENST00000318007 LRRTM2O43300 516 aa13.59□□□□□ -0.23
PDLIM5-202ENST00000318007 MPZL2O60487 215 aa13.59□□□□□ -0.23
PDLIM5-202ENST00000318007 GSTT1P30711 240 aa13.59□□□□□ -0.23
PDLIM5-202ENST00000318007 CA7P43166 264 aa13.59□□□□□ -0.23
PDLIM5-202ENST00000318007 MVKQ03426 396 aa13.59□□□□□ -0.23
PDLIM5-202ENST00000318007 FAM205BPQ63HN1 556 aa13.59□□□□□ -0.23
PDLIM5-202ENST00000318007 HDDC2Q7Z4H3 204 aa13.59□□□□□ -0.23
PDLIM5-202ENST00000318007 C20orf196Q8IYI0 205 aa13.59□□□□□ -0.23
PDLIM5-202ENST00000318007 ZNF540Q8NDQ6 660 aa13.59□□□□□ -0.23
PDLIM5-202ENST00000318007 OR4F15Q8NGB8 312 aa13.59□□□□□ -0.23
PDLIM5-202ENST00000318007 OR2T4Q8NH00 348 aa13.59□□□□□ -0.23
PDLIM5-202ENST00000318007 TMEM45BQ96B21 275 aa13.59□□□□□ -0.23
PDLIM5-202ENST00000318007 RNFT2Q96EX2 444 aa13.59□□□□□ -0.23
PDLIM5-202ENST00000318007 TEAD3Q99594 435 aa13.59□□□□□ -0.23
PDLIM5-202ENST00000318007 WDR76Q9H967 626 aa13.59□□□□□ -0.23
PDLIM5-202ENST00000318007 PARPBPQ9NWS1 579 aa13.59□□□□□ -0.23
PDLIM5-202ENST00000318007 MEMO1Q9Y316 297 aa13.59□□□□□ -0.23
PDLIM5-202ENST00000318007 PRODHO43272 600 aa13.58□□□□□ -0.24
PDLIM5-202ENST00000318007 DBTP11182 482 aaKnown RBP13.58□□□□□ -0.24
PDLIM5-202ENST00000318007 B4GALT1P15291 398 aa13.58□□□□□ -0.24
PDLIM5-202ENST00000318007 CDH15P55291 814 aa13.58□□□□□ -0.24
PDLIM5-202ENST00000318007 THEM4Q5T1C6 240 aa13.58□□□□□ -0.24
PDLIM5-202ENST00000318007 ERI1Q8IV48 349 aaKnown RBP13.58□□□□□ -0.24
PDLIM5-202ENST00000318007 ZNF610Q8N9Z0 462 aa13.58□□□□□ -0.24
PDLIM5-202ENST00000318007 KISS1RQ969F8 398 aaPredicted RBP13.58□□□□□ -0.24
PDLIM5-202ENST00000318007 STARD4Q96DR4 205 aa13.58□□□□□ -0.24
PDLIM5-202ENST00000318007 NMNAT2Q9BZQ4 307 aa13.58□□□□□ -0.24
PDLIM5-202ENST00000318007 EMC7Q9NPA0 242 aa13.58□□□□□ -0.24
PDLIM5-202ENST00000318007 TAS2R16Q9NYV7 291 aa13.58□□□□□ -0.24
PDLIM5-202ENST00000318007 HSPE1-MOB4S4R3N1 261 aa13.58□□□□□ -0.24
PDLIM5-202ENST00000318007 CCDC182A6NF36 153 aa13.58□□□□□ -0.24
PDLIM5-202ENST00000318007 LYZL6O75951 148 aa13.58□□□□□ -0.24
PDLIM5-202ENST00000318007 SCG5P05408 212 aa13.58□□□□□ -0.24
PDLIM5-202ENST00000318007 SLC2A5P22732 501 aa13.58□□□□□ -0.24
PDLIM5-202ENST00000318007 TIMP3P35625 211 aa13.58□□□□□ -0.24
PDLIM5-202ENST00000318007 MTNR1AP48039 350 aa13.58□□□□□ -0.24
PDLIM5-202ENST00000318007 GUSBP1Q15486 140 aa13.58□□□□□ -0.24
PDLIM5-202ENST00000318007 SGCAQ16586 387 aa13.58□□□□□ -0.24
PDLIM5-202ENST00000318007 UGT2A3Q6UWM9 527 aa13.58□□□□□ -0.24
PDLIM5-202ENST00000318007 TFAP2EQ6VUC0 442 aa13.58□□□□□ -0.24
PDLIM5-202ENST00000318007 MEPCEQ7L2J0 689 aaKnown RBP13.58□□□□□ -0.24
PDLIM5-202ENST00000318007 LIX1LQ8IVB5 337 aa13.58□□□□□ -0.24
PDLIM5-202ENST00000318007 TMEM54Q969K7 222 aa13.58□□□□□ -0.24
PDLIM5-202ENST00000318007 Q96MT0 163 aa13.58□□□□□ -0.24
PDLIM5-202ENST00000318007 CCDC90BQ9GZT6 254 aa13.58□□□□□ -0.24
PDLIM5-202ENST00000318007 PAK1IP1Q9NWT1 392 aaPredicted RBP13.58□□□□□ -0.24
PDLIM5-202ENST00000318007 PROCRQ9UNN8 238 aa13.58□□□□□ -0.24
PDLIM5-202ENST00000318007 MYRFQ9Y2G1 1151 aa13.58□□□□□ -0.24
PDLIM5-202ENST00000318007 ESPL1Q14674 2120 aa13.58□□□□□ -0.24
PDLIM5-202ENST00000318007 IGLV1-36A0A0B4J1U3 117 aa13.57□□□□□ -0.24
PDLIM5-202ENST00000318007 PSKH1P11801 424 aa13.57□□□□□ -0.24
PDLIM5-202ENST00000318007 CRABP1P29762 137 aa13.57□□□□□ -0.24
PDLIM5-202ENST00000318007 OCLNQ16625 522 aa13.57□□□□□ -0.24
PDLIM5-202ENST00000318007 HIST3H3Q16695 136 aa13.57□□□□□ -0.24
PDLIM5-202ENST00000318007 ALKBH2Q6NS38 261 aa13.57□□□□□ -0.24
PDLIM5-202ENST00000318007 LINC00346Q8IVM7 164 aa13.57□□□□□ -0.24
PDLIM5-202ENST00000318007 GID4Q8IVV7 300 aa13.57□□□□□ -0.24
PDLIM5-202ENST00000318007 RFLNBQ8N5W9 214 aa13.57□□□□□ -0.24
PDLIM5-202ENST00000318007 FBLIM1Q8WUP2 373 aa13.57□□□□□ -0.24
PDLIM5-202ENST00000318007 RND1Q92730 232 aa13.57□□□□□ -0.24
PDLIM5-202ENST00000318007 GPR35Q9HC97 309 aa13.57□□□□□ -0.24
PDLIM5-202ENST00000318007 GLRX2Q9NS18 164 aa13.57□□□□□ -0.24
PDLIM5-202ENST00000318007 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.57□□□□□ -0.24
PDLIM5-202ENST00000318007 COMMD3-BMI1R4GMX3 469 aa13.57□□□□□ -0.24
PDLIM5-202ENST00000318007 A0A1W2PR80 420 aa13.56□□□□□ -0.24
PDLIM5-202ENST00000318007 ZNF587BE7ETH6 402 aa13.56□□□□□ -0.24
PDLIM5-202ENST00000318007 E9PLN8 166 aa13.56□□□□□ -0.24
PDLIM5-202ENST00000318007 PSMD9O00233 223 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms