RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 RFPL4AA6NLU0 287 aa12.18□□□□□ -0.46
SKA3-202ENST00000314759 RFPL4AL1F8VTS6 287 aa12.18□□□□□ -0.46
SKA3-202ENST00000314759 POU2F2P09086 479 aa12.18□□□□□ -0.46
SKA3-202ENST00000314759 FBXO45P0C2W1 286 aa12.18□□□□□ -0.46
SKA3-202ENST00000314759 H2AFB1P0C5Y9 115 aa12.18□□□□□ -0.46
SKA3-202ENST00000314759 CT45A8P0DMV1 189 aa12.18□□□□□ -0.46
SKA3-202ENST00000314759 CT45A9P0DMV2 189 aa12.18□□□□□ -0.46
SKA3-202ENST00000314759 SDHAP31040 664 aa12.18□□□□□ -0.46
SKA3-202ENST00000314759 PRSS3P35030 304 aa12.18□□□□□ -0.46
SKA3-202ENST00000314759 RAB38P57729 211 aa12.18□□□□□ -0.46
SKA3-202ENST00000314759 ZNF74Q16587 644 aa12.18□□□□□ -0.46
SKA3-202ENST00000314759 GUCA2BQ16661 112 aa12.18□□□□□ -0.46
SKA3-202ENST00000314759 ALG10Q5BKT4 473 aa12.18□□□□□ -0.46
SKA3-202ENST00000314759 CT45A2Q5DJT8 189 aa12.18□□□□□ -0.46
SKA3-202ENST00000314759 LY6G6FQ5SQ64 297 aa12.18□□□□□ -0.46
SKA3-202ENST00000314759 STEAP1BQ6NZ63 245 aa12.18□□□□□ -0.46
SKA3-202ENST00000314759 MOB3CQ70IA8 216 aa12.18□□□□□ -0.46
SKA3-202ENST00000314759 ZNF546Q86UE3 836 aa12.18□□□□□ -0.46
SKA3-202ENST00000314759 LDLRAD3Q86YD5 345 aa12.18□□□□□ -0.46
SKA3-202ENST00000314759 PUSL1Q8N0Z8 303 aaKnown RBP12.18□□□□□ -0.46
SKA3-202ENST00000314759 OR6N2Q8NGY6 317 aa12.18□□□□□ -0.46
SKA3-202ENST00000314759 PATE1Q8WXA2 126 aa12.18□□□□□ -0.46
SKA3-202ENST00000314759 NKX3-1Q99801 234 aaPredicted RBP12.18□□□□□ -0.46
SKA3-202ENST00000314759 UQCC2Q9BRT2 126 aa12.18□□□□□ -0.46
SKA3-202ENST00000314759 SLC19A3Q9BZV2 496 aa12.18□□□□□ -0.46
SKA3-202ENST00000314759 COMMD4Q9H0A8 199 aa12.18□□□□□ -0.46
SKA3-202ENST00000314759 POFUT1Q9H488 388 aa12.18□□□□□ -0.46
SKA3-202ENST00000314759 TMEM185BQ9H7F4 350 aa12.18□□□□□ -0.46
SKA3-202ENST00000314759 TMEM212A6NML5 194 aa12.17□□□□□ -0.46
SKA3-202ENST00000314759 GPANK1O95872 356 aa12.17□□□□□ -0.46
SKA3-202ENST00000314759 APODP05090 189 aa12.17□□□□□ -0.46
SKA3-202ENST00000314759 ALOX5APP20292 161 aa12.17□□□□□ -0.46
SKA3-202ENST00000314759 CNR1P21554 472 aa12.17□□□□□ -0.46
SKA3-202ENST00000314759 LUMP51884 338 aaPredicted RBP12.17□□□□□ -0.46
SKA3-202ENST00000314759 C2orf76Q3KRA6 126 aa12.17□□□□□ -0.46
SKA3-202ENST00000314759 RNF44Q7L0R7 432 aa12.17□□□□□ -0.46
SKA3-202ENST00000314759 GATSQ8NAP1 163 aa12.17□□□□□ -0.46
SKA3-202ENST00000314759 C1orf198Q9H425 327 aa12.17□□□□□ -0.46
SKA3-202ENST00000314759 OR10H1Q9Y4A9 318 aa12.17□□□□□ -0.46
SKA3-202ENST00000314759 ELOA3DA6NLF2 546 aaPredicted RBP12.17□□□□□ -0.46
SKA3-202ENST00000314759 ATG12O94817 140 aa12.17□□□□□ -0.46
SKA3-202ENST00000314759 ZNF432O94892 652 aa12.17□□□□□ -0.46
SKA3-202ENST00000314759 ITGB2P05107 769 aa12.17□□□□□ -0.46
SKA3-202ENST00000314759 STARP49675 285 aa12.17□□□□□ -0.46
SKA3-202ENST00000314759 ELOA3BQ3SY89 546 aa12.17□□□□□ -0.46
SKA3-202ENST00000314759 ELOA3Q8NG57 546 aa12.17□□□□□ -0.46
SKA3-202ENST00000314759 AMELYQ99218 206 aa12.17□□□□□ -0.46
SKA3-202ENST00000314759 MNTQ99583 582 aa12.17□□□□□ -0.46
SKA3-202ENST00000314759 G6PC3Q9BUM1 346 aa12.17□□□□□ -0.46
SKA3-202ENST00000314759 PLA2G2FQ9BZM2 168 aa12.17□□□□□ -0.46
SKA3-202ENST00000314759 CRISPLD2Q9H0B8 497 aa12.17□□□□□ -0.46
SKA3-202ENST00000314759 ALX4Q9H161 411 aaPredicted RBP12.17□□□□□ -0.46
SKA3-202ENST00000314759 Q9N2J8 555 aa12.17□□□□□ -0.46
SKA3-202ENST00000314759 CDV3Q9UKY7 258 aaKnown RBP12.17□□□□□ -0.46
SKA3-202ENST00000314759 KCNK7Q9Y2U2 307 aa12.17□□□□□ -0.46
SKA3-202ENST00000314759 F8W036 122 aa12.17□□□□□ -0.46
SKA3-202ENST00000314759 PRKNO60260 465 aaPredicted RBP12.17□□□□□ -0.46
SKA3-202ENST00000314759 WNT11O96014 354 aa12.17□□□□□ -0.46
SKA3-202ENST00000314759 GP1BAP07359 652 aa12.17□□□□□ -0.46
SKA3-202ENST00000314759 OR4E1P0C645 316 aa12.17□□□□□ -0.46
SKA3-202ENST00000314759 APEHP13798 732 aaKnown RBP12.17□□□□□ -0.46
SKA3-202ENST00000314759 MGMTP16455 207 aa12.17□□□□□ -0.46
SKA3-202ENST00000314759 KIR3DL2P43630 455 aa12.17□□□□□ -0.46
SKA3-202ENST00000314759 UBE2IP63279 158 aaKnown RBP12.17□□□□□ -0.46
SKA3-202ENST00000314759 ITPRIPL2Q3MIP1 535 aa12.17□□□□□ -0.46
SKA3-202ENST00000314759 MESTQ5EB52 335 aa12.17□□□□□ -0.46
SKA3-202ENST00000314759 OTPQ5XKR4 325 aa12.17□□□□□ -0.46
SKA3-202ENST00000314759 TMEM17Q86X19 198 aa12.17□□□□□ -0.46
SKA3-202ENST00000314759 BCORP1Q8N888 145 aa12.17□□□□□ -0.46
SKA3-202ENST00000314759 FAM3DQ96BQ1 224 aa12.17□□□□□ -0.46
SKA3-202ENST00000314759 FANCFQ9NPI8 374 aa12.17□□□□□ -0.46
SKA3-202ENST00000314759 SLC39A1Q9NY26 324 aa12.17□□□□□ -0.46
SKA3-202ENST00000314759 NDRG3Q9UGV2 375 aa12.17□□□□□ -0.46
SKA3-202ENST00000314759 DISC1C4P0D8 188 aa12.16□□□□□ -0.46
SKA3-202ENST00000314759 PPP1CAP62136 330 aa12.16□□□□□ -0.46
SKA3-202ENST00000314759 NFATC4Q14934 902 aa12.16□□□□□ -0.46
SKA3-202ENST00000314759 MANEAQ5SRI9 462 aa12.16□□□□□ -0.46
SKA3-202ENST00000314759 LRRC69Q6ZNQ3 347 aa12.16□□□□□ -0.46
SKA3-202ENST00000314759 SFTPA2Q8IWL1 248 aa12.16□□□□□ -0.46
SKA3-202ENST00000314759 GABRG1Q8N1C3 465 aa12.16□□□□□ -0.46
SKA3-202ENST00000314759 GPX8Q8TED1 209 aa12.16□□□□□ -0.46
SKA3-202ENST00000314759 FAM131CQ96AQ9 280 aa12.16□□□□□ -0.46
SKA3-202ENST00000314759 TSNAXQ99598 290 aaKnown RBP12.16□□□□□ -0.46
SKA3-202ENST00000314759 LPAR4Q99677 370 aa12.16□□□□□ -0.46
SKA3-202ENST00000314759 MMP25Q9NPA2 562 aa12.16□□□□□ -0.46
SKA3-202ENST00000314759 YBX2Q9Y2T7 364 aaKnown RBP12.16□□□□□ -0.46
SKA3-202ENST00000314759 VCANP13611 3396 aa12.16□□□□□ -0.46
SKA3-202ENST00000314759 ADCYAP1P18509 176 aa12.16□□□□□ -0.46
SKA3-202ENST00000314759 CFPP27918 469 aa12.16□□□□□ -0.46
SKA3-202ENST00000314759 CCKBRP32239 447 aa12.16□□□□□ -0.46
SKA3-202ENST00000314759 EGR4Q05215 589 aa12.16□□□□□ -0.46
SKA3-202ENST00000314759 WDR38Q5JTN6 314 aa12.16□□□□□ -0.46
SKA3-202ENST00000314759 ARHGAP40Q5TG30 622 aa12.16□□□□□ -0.46
SKA3-202ENST00000314759 OR2W3Q7Z3T1 314 aa12.16□□□□□ -0.46
SKA3-202ENST00000314759 ATG4DQ86TL0 474 aaPredicted RBP12.16□□□□□ -0.46
SKA3-202ENST00000314759 ZNF524Q96C55 264 aa12.16□□□□□ -0.46
SKA3-202ENST00000314759 C4orf45Q96LM5 186 aa12.16□□□□□ -0.46
SKA3-202ENST00000314759 DCBLD2Q96PD2 775 aa12.16□□□□□ -0.46
SKA3-202ENST00000314759 LMF1Q96S06 567 aa12.16□□□□□ -0.46
SKA3-202ENST00000314759 GRHPRQ9UBQ7 328 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms