RNA–Protein interactions for RNA: ENST00000309996.6

SPTBN2-201, Transcript of spectrin beta, non-erythrocytic 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN2, Length 7,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN2-201ENST00000309996 MAMDC4Q6UXC1 1216 aa11.9□□□□□ -0.51
SPTBN2-201ENST00000309996 PLK3Q9H4B4 646 aa11.9□□□□□ -0.51
SPTBN2-201ENST00000309996 NECAP2Q9NVZ3 263 aa11.9□□□□□ -0.51
SPTBN2-201ENST00000309996 EXO1Q9UQ84 846 aaKnown RBP11.9□□□□□ -0.51
SPTBN2-201ENST00000309996 PPP1R3CQ9UQK1 317 aa11.9□□□□□ -0.51
SPTBN2-201ENST00000309996 SLC16A6O15403 523 aa11.89□□□□□ -0.51
SPTBN2-201ENST00000309996 ID4P47928 161 aa11.89□□□□□ -0.51
SPTBN2-201ENST00000309996 OR1D5P58170 312 aa11.89□□□□□ -0.51
SPTBN2-201ENST00000309996 OR52H1Q8NGJ2 320 aa11.89□□□□□ -0.51
SPTBN2-201ENST00000309996 RNF141Q8WVD5 230 aa11.89□□□□□ -0.51
SPTBN2-201ENST00000309996 ACPTQ9BZG2 426 aa11.89□□□□□ -0.51
SPTBN2-201ENST00000309996 ARHGAP33O14559 1287 aa11.89□□□□□ -0.51
SPTBN2-201ENST00000309996 TSPAN12O95859 305 aa11.89□□□□□ -0.51
SPTBN2-201ENST00000309996 PLA1AQ53H76 456 aa11.89□□□□□ -0.51
SPTBN2-201ENST00000309996 ASIC5Q9NY37 505 aa11.89□□□□□ -0.51
SPTBN2-201ENST00000309996 MRPS28Q9Y2Q9 187 aaKnown RBP11.89□□□□□ -0.51
SPTBN2-201ENST00000309996 SH2D1BO14796 132 aa11.89□□□□□ -0.51
SPTBN2-201ENST00000309996 EIF1BO60739 113 aaKnown RBP11.89□□□□□ -0.51
SPTBN2-201ENST00000309996 CDH26Q8IXH8 852 aa11.89□□□□□ -0.51
SPTBN2-201ENST00000309996 PAAF1Q9BRP4 392 aa11.89□□□□□ -0.51
SPTBN2-201ENST00000309996 OR10A3P58181 314 aa11.89□□□□□ -0.51
SPTBN2-201ENST00000309996 SLC35D2Q76EJ3 337 aa11.89□□□□□ -0.51
SPTBN2-201ENST00000309996 PRR7Q8TB68 274 aa11.89□□□□□ -0.51
SPTBN2-201ENST00000309996 SEC22AQ96IW7 307 aa11.89□□□□□ -0.51
SPTBN2-201ENST00000309996 LINC00597Q9H2U6 94 aa11.89□□□□□ -0.51
SPTBN2-201ENST00000309996 GORASP2Q9H8Y8 452 aa11.89□□□□□ -0.51
SPTBN2-201ENST00000309996 OSGIN1Q9UJX0 560 aa11.89□□□□□ -0.51
SPTBN2-201ENST00000309996 ZNF701M0R085 212 aaPredicted RBP11.89□□□□□ -0.51
SPTBN2-201ENST00000309996 DOK2O60496 412 aa11.89□□□□□ -0.51
SPTBN2-201ENST00000309996 ZNF133P52736 654 aaPredicted RBP11.89□□□□□ -0.51
SPTBN2-201ENST00000309996 BATF2Q8N1L9 274 aa11.89□□□□□ -0.51
SPTBN2-201ENST00000309996 OR13C2Q8NGS9 318 aa11.89□□□□□ -0.51
SPTBN2-201ENST00000309996 PHOSPHO2Q8TCD6 241 aa11.89□□□□□ -0.51
SPTBN2-201ENST00000309996 RTL8AQ9BWD3 113 aa11.89□□□□□ -0.51
SPTBN2-201ENST00000309996 XYLT2Q9H1B5 865 aa11.89□□□□□ -0.51
SPTBN2-201ENST00000309996 MED20Q9H944 212 aa11.89□□□□□ -0.51
SPTBN2-201ENST00000309996 SDR39U1Q9NRG7 319 aaPredicted RBP11.89□□□□□ -0.51
SPTBN2-201ENST00000309996 RNF150Q9ULK6 438 aa11.89□□□□□ -0.51
SPTBN2-201ENST00000309996 SLC5A6Q9Y289 635 aa11.89□□□□□ -0.51
SPTBN2-201ENST00000309996 PCDHGA9Q9Y5G4 932 aaKnown RBP11.89□□□□□ -0.51
SPTBN2-201ENST00000309996 GALR2O43603 387 aaPredicted RBP11.89□□□□□ -0.51
SPTBN2-201ENST00000309996 HPNP05981 417 aa11.89□□□□□ -0.51
SPTBN2-201ENST00000309996 PVRP15151 417 aa11.89□□□□□ -0.51
SPTBN2-201ENST00000309996 IL4RP24394 825 aa11.89□□□□□ -0.51
SPTBN2-201ENST00000309996 ZNF595Q8IYB9 648 aa11.89□□□□□ -0.51
SPTBN2-201ENST00000309996 EMC7Q9NPA0 242 aa11.89□□□□□ -0.51
SPTBN2-201ENST00000309996 WASH6PQ9NQA3 447 aa11.89□□□□□ -0.51
SPTBN2-201ENST00000309996 SAGE1Q9NXZ1 904 aa11.89□□□□□ -0.51
SPTBN2-201ENST00000309996 PRAMEF25A6NGN4 478 aa11.88□□□□□ -0.51
SPTBN2-201ENST00000309996 SDC1P18827 310 aa11.88□□□□□ -0.51
SPTBN2-201ENST00000309996 SELPLGQ14242 412 aa11.88□□□□□ -0.51
SPTBN2-201ENST00000309996 GTDC1Q4AE62 458 aa11.88□□□□□ -0.51
SPTBN2-201ENST00000309996 PRAMEF5Q5TYX0 476 aa11.88□□□□□ -0.51
SPTBN2-201ENST00000309996 PRAMEF6Q5VXH4 476 aa11.88□□□□□ -0.51
SPTBN2-201ENST00000309996 B3GNT8Q7Z7M8 397 aa11.88□□□□□ -0.51
SPTBN2-201ENST00000309996 HSD17B11Q8NBQ5 300 aa11.88□□□□□ -0.51
SPTBN2-201ENST00000309996 OR5D18Q8NGL1 313 aa11.88□□□□□ -0.51
SPTBN2-201ENST00000309996 DTD2Q96FN9 168 aa11.88□□□□□ -0.51
SPTBN2-201ENST00000309996 POFUT1Q9H488 388 aa11.88□□□□□ -0.51
SPTBN2-201ENST00000309996 GAB2Q9UQC2 676 aa11.88□□□□□ -0.51
SPTBN2-201ENST00000309996 C21orf33P30042 268 aaPredicted RBP11.88□□□□□ -0.51
SPTBN2-201ENST00000309996 Q56UQ5 140 aa11.88□□□□□ -0.51
SPTBN2-201ENST00000309996 RTP2Q5QGT7 225 aa11.88□□□□□ -0.51
SPTBN2-201ENST00000309996 DPPA4Q7L190 304 aa11.88□□□□□ -0.51
SPTBN2-201ENST00000309996 SUMF1Q8NBK3 374 aa11.88□□□□□ -0.51
SPTBN2-201ENST00000309996 PXT1Q8NFP0 134 aa11.88□□□□□ -0.51
SPTBN2-201ENST00000309996 GGHQ92820 318 aa11.88□□□□□ -0.51
SPTBN2-201ENST00000309996 KHSRPQ92945 711 aaKnown RBP eCLIP11.88□□□□□ -0.51
SPTBN2-201ENST00000309996 NUMBLQ9Y6R0 609 aa11.88□□□□□ -0.51
SPTBN2-201ENST00000309996 ATXN1LP0C7T5 689 aaKnown RBP11.88□□□□□ -0.51
SPTBN2-201ENST00000309996 HIST1H1TP22492 207 aaPredicted RBP11.88□□□□□ -0.51
SPTBN2-201ENST00000309996 GMPRP36959 345 aa11.88□□□□□ -0.51
SPTBN2-201ENST00000309996 WNT7BP56706 349 aa11.88□□□□□ -0.51
SPTBN2-201ENST00000309996 RAB6CQ53S08 254 aa11.88□□□□□ -0.51
SPTBN2-201ENST00000309996 DPPA2Q7Z7J5 298 aa11.88□□□□□ -0.51
SPTBN2-201ENST00000309996 OR10K1Q8NGX5 313 aa11.88□□□□□ -0.51
SPTBN2-201ENST00000309996 LILRB1Q8NHL6 650 aaPredicted RBP11.88□□□□□ -0.51
SPTBN2-201ENST00000309996 DYNLRB2Q8TF09 96 aa11.88□□□□□ -0.51
SPTBN2-201ENST00000309996 UTP4Q969X6 686 aaKnown RBP11.88□□□□□ -0.51
SPTBN2-201ENST00000309996 C16orf70Q9BSU1 422 aa11.88□□□□□ -0.51
SPTBN2-201ENST00000309996 NOX4Q9NPH5 578 aa11.88□□□□□ -0.51
SPTBN2-201ENST00000309996 K7EQS6 105 aa11.88□□□□□ -0.51
SPTBN2-201ENST00000309996 DNPH1O43598 174 aa11.88□□□□□ -0.51
SPTBN2-201ENST00000309996 TXNDC12O95881 172 aa11.88□□□□□ -0.51
SPTBN2-201ENST00000309996 TRAPPC2P0DI81 140 aa11.88□□□□□ -0.51
SPTBN2-201ENST00000309996 TRAPPC2BP0DI82 140 aa11.88□□□□□ -0.51
SPTBN2-201ENST00000309996 HOXD13P35453 343 aa11.88□□□□□ -0.51
SPTBN2-201ENST00000309996 ENTHD1Q8IYW4 607 aa11.88□□□□□ -0.51
SPTBN2-201ENST00000309996 WDR76Q9H967 626 aa11.88□□□□□ -0.51
SPTBN2-201ENST00000309996 HTR6P50406 440 aa11.88□□□□□ -0.51
SPTBN2-201ENST00000309996 ZNF91Q05481 1191 aa11.88□□□□□ -0.51
SPTBN2-201ENST00000309996 VASH2Q86V25 355 aa11.88□□□□□ -0.51
SPTBN2-201ENST00000309996 TCTE3Q8IZS6 198 aa11.88□□□□□ -0.51
SPTBN2-201ENST00000309996 KCNG3Q8TAE7 436 aa11.88□□□□□ -0.51
SPTBN2-201ENST00000309996 FAM90A27PA6NNH2 459 aa11.88□□□□□ -0.51
SPTBN2-201ENST00000309996 GLRA1P23415 457 aa11.88□□□□□ -0.51
SPTBN2-201ENST00000309996 ILKQ13418 452 aa11.88□□□□□ -0.51
SPTBN2-201ENST00000309996 PHLDA2Q53GA4 152 aa11.88□□□□□ -0.51
SPTBN2-201ENST00000309996 SSX7Q7RTT5 188 aa11.88□□□□□ -0.51
SPTBN2-201ENST00000309996 GPR150Q8NGU9 434 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms