RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 PXDC1Q5TGL8 231 aa7.05□□□□□ -1.28
SF3B3-201ENST00000302516 PLPP6Q8IY26 295 aa7.05□□□□□ -1.28
SF3B3-201ENST00000302516 C19orf47Q8N9M1 422 aaKnown RBP7.05□□□□□ -1.28
SF3B3-201ENST00000302516 GJC3Q8NFK1 279 aa7.05□□□□□ -1.28
SF3B3-201ENST00000302516 OR10J5Q8NHC4 309 aa7.05□□□□□ -1.28
SF3B3-201ENST00000302516 MED20Q9H944 212 aa7.05□□□□□ -1.28
SF3B3-201ENST00000302516 POLR2AP24928 1970 aaKnown RBP7.05□□□□□ -1.28
SF3B3-201ENST00000302516 PHF1O43189 567 aaPredicted RBP7.05□□□□□ -1.28
SF3B3-201ENST00000302516 C1SP09871 688 aa7.05□□□□□ -1.28
SF3B3-201ENST00000302516 BLVRBP30043 206 aaPredicted RBP7.05□□□□□ -1.28
SF3B3-201ENST00000302516 HTR5AP47898 357 aa7.05□□□□□ -1.28
SF3B3-201ENST00000302516 VASPP50552 380 aaPredicted RBP7.05□□□□□ -1.28
SF3B3-201ENST00000302516 ERVFC1P60507 584 aa7.05□□□□□ -1.28
SF3B3-201ENST00000302516 PMPCAQ10713 525 aa7.05□□□□□ -1.28
SF3B3-201ENST00000302516 FAM58AQ8N1B3 248 aa7.05□□□□□ -1.28
SF3B3-201ENST00000302516 JAM3Q9BX67 310 aa7.05□□□□□ -1.28
SF3B3-201ENST00000302516 CHST8Q9H2A9 424 aa7.05□□□□□ -1.28
SF3B3-201ENST00000302516 ARV1Q9H2C2 271 aa7.05□□□□□ -1.28
SF3B3-201ENST00000302516 UBQLN3Q9H347 655 aa7.05□□□□□ -1.28
SF3B3-201ENST00000302516 PLEKHA2Q9HB19 425 aa7.05□□□□□ -1.28
SF3B3-201ENST00000302516 SLC25A19Q9HC21 320 aa7.05□□□□□ -1.28
SF3B3-201ENST00000302516 FAM96BQ9Y3D0 163 aa7.05□□□□□ -1.28
SF3B3-201ENST00000302516 KDM4EB2RXH2 506 aaPredicted RBP7.05□□□□□ -1.28
SF3B3-201ENST00000302516 MAOBP27338 520 aa7.05□□□□□ -1.28
SF3B3-201ENST00000302516 HOXD9P28356 352 aaPredicted RBP7.05□□□□□ -1.28
SF3B3-201ENST00000302516 SUB1P53999 127 aaKnown RBP eCLIP7.05□□□□□ -1.283e-8■■■■■ 45.6
SF3B3-201ENST00000302516 NDUFA6P56556 154 aa7.05□□□□□ -1.28
SF3B3-201ENST00000302516 C4orf17Q53FE4 359 aa7.05□□□□□ -1.28
SF3B3-201ENST00000302516 PLXDC2Q6UX71 529 aa7.05□□□□□ -1.28
SF3B3-201ENST00000302516 TFAP2EQ6VUC0 442 aa7.05□□□□□ -1.28
SF3B3-201ENST00000302516 TP53INP2Q8IXH6 220 aa7.05□□□□□ -1.28
SF3B3-201ENST00000302516 ST8SIA4Q92187 359 aa7.05□□□□□ -1.28
SF3B3-201ENST00000302516 SMIM19Q96E16 107 aa7.05□□□□□ -1.28
SF3B3-201ENST00000302516 AMBRA1Q9C0C7 1298 aa7.05□□□□□ -1.28
SF3B3-201ENST00000302516 PLEKHF2Q9H8W4 249 aa7.05□□□□□ -1.28
SF3B3-201ENST00000302516 SPATA6Q9NWH7 488 aaPredicted RBP7.05□□□□□ -1.28
SF3B3-201ENST00000302516 PADI1Q9ULC6 663 aa7.05□□□□□ -1.28
SF3B3-201ENST00000302516 YARS2Q9Y2Z4 477 aaKnown RBP7.05□□□□□ -1.28
SF3B3-201ENST00000302516 SPAG17Q6Q759 2223 aa7.05□□□□□ -1.28
SF3B3-201ENST00000302516 DBHP09172 617 aa7.04□□□□□ -1.28
SF3B3-201ENST00000302516 LIPCP11150 499 aa7.04□□□□□ -1.28
SF3B3-201ENST00000302516 ZNF85Q03923 595 aa7.04□□□□□ -1.28
SF3B3-201ENST00000302516 MORN1Q5T089 497 aa7.04□□□□□ -1.28
SF3B3-201ENST00000302516 SLC16A14Q7RTX9 510 aa7.04□□□□□ -1.28
SF3B3-201ENST00000302516 OR2G3Q8NGZ4 309 aa7.04□□□□□ -1.28
SF3B3-201ENST00000302516 PIGLQ9Y2B2 252 aa7.04□□□□□ -1.28
SF3B3-201ENST00000302516 PCDHGA1Q9Y5H4 931 aa7.04□□□□□ -1.28
SF3B3-201ENST00000302516 SMAD6O43541 496 aaKnown RBP7.04□□□□□ -1.28
SF3B3-201ENST00000302516 TUSC2O75896 110 aa7.04□□□□□ -1.28
SF3B3-201ENST00000302516 SSR4P51571 173 aa7.04□□□□□ -1.28
SF3B3-201ENST00000302516 CHRNEQ04844 493 aa7.04□□□□□ -1.28
SF3B3-201ENST00000302516 SLC48A1Q6P1K1 146 aa7.04□□□□□ -1.28
SF3B3-201ENST00000302516 PET117Q6UWS5 81 aa7.04□□□□□ -1.28
SF3B3-201ENST00000302516 BTNL8Q6UX41 500 aa7.04□□□□□ -1.28
SF3B3-201ENST00000302516 SLC35G3Q8N808 338 aa7.04□□□□□ -1.28
SF3B3-201ENST00000302516 SECTM1Q8WVN6 248 aa7.04□□□□□ -1.28
SF3B3-201ENST00000302516 SEMA6CQ9H3T2 930 aa7.04□□□□□ -1.28
SF3B3-201ENST00000302516 HIF1ANQ9NWT6 349 aa7.04□□□□□ -1.28
SF3B3-201ENST00000302516 SPHK1Q9NYA1 384 aa7.04□□□□□ -1.28
SF3B3-201ENST00000302516 TRAPPC2LQ9UL33 140 aa7.04□□□□□ -1.28
SF3B3-201ENST00000302516 E5RGE8 158 aa7.04□□□□□ -1.28
SF3B3-201ENST00000302516 SPP1P10451 314 aa7.04□□□□□ -1.28
SF3B3-201ENST00000302516 ARL16Q0P5N6 197 aa7.04□□□□□ -1.28
SF3B3-201ENST00000302516 HSF5Q4G112 596 aaPredicted RBP7.04□□□□□ -1.28
SF3B3-201ENST00000302516 TMEM71Q6P5X7 295 aa7.04□□□□□ -1.28
SF3B3-201ENST00000302516 OR5M11Q96RB7 305 aa7.04□□□□□ -1.28
SF3B3-201ENST00000302516 DHRS9Q9BPW9 319 aa7.04□□□□□ -1.28
SF3B3-201ENST00000302516 LAMP3Q9UQV4 416 aa7.04□□□□□ -1.28
SF3B3-201ENST00000302516 NSG2Q9Y328 171 aa7.04□□□□□ -1.28
SF3B3-201ENST00000302516 NKX6-3A6NJ46 265 aa7.04□□□□□ -1.28
SF3B3-201ENST00000302516 MRPL33O75394 65 aaKnown RBP7.04□□□□□ -1.28
SF3B3-201ENST00000302516 UTS2O95399 124 aa7.04□□□□□ -1.28
SF3B3-201ENST00000302516 ADH4P08319 380 aa7.04□□□□□ -1.28
SF3B3-201ENST00000302516 OMGP23515 440 aa7.04□□□□□ -1.28
SF3B3-201ENST00000302516 APEX1P27695 318 aaKnown RBP7.04□□□□□ -1.28
SF3B3-201ENST00000302516 ARG2P78540 354 aa7.04□□□□□ -1.28
SF3B3-201ENST00000302516 KIAA0141Q14154 515 aaPredicted RBP7.04□□□□□ -1.28
SF3B3-201ENST00000302516 DBX2Q6ZNG2 339 aa7.04□□□□□ -1.28
SF3B3-201ENST00000302516 SYS1Q8N2H4 156 aa7.04□□□□□ -1.28
SF3B3-201ENST00000302516 CMTM2Q8TAZ6 248 aa7.04□□□□□ -1.28
SF3B3-201ENST00000302516 CHRDL1Q9BU40 450 aa7.04□□□□□ -1.28
SF3B3-201ENST00000302516 OR51I2Q9H344 312 aa7.04□□□□□ -1.28
SF3B3-201ENST00000302516 ZNF331Q9NQX6 463 aaPredicted RBP7.04□□□□□ -1.28
SF3B3-201ENST00000302516 CSAG2Q9Y5P2 127 aa7.04□□□□□ -1.28
SF3B3-201ENST00000302516 BET1O15155 118 aa7.04□□□□□ -1.28
SF3B3-201ENST00000302516 PMP2P02689 132 aa7.04□□□□□ -1.28
SF3B3-201ENST00000302516 CHRM4P08173 479 aa7.04□□□□□ -1.28
SF3B3-201ENST00000302516 RPS19P39019 145 aaKnown RBP7.04□□□□□ -1.28
SF3B3-201ENST00000302516 MAP2K6P52564 334 aa7.04□□□□□ -1.28
SF3B3-201ENST00000302516 DLEU7Q6UYE1 221 aa7.04□□□□□ -1.28
SF3B3-201ENST00000302516 FJX1Q86VR8 437 aa7.04□□□□□ -1.28
SF3B3-201ENST00000302516 ZNF439Q8NDP4 499 aa7.04□□□□□ -1.28
SF3B3-201ENST00000302516 ZFPM2Q8WW38 1151 aa7.04□□□□□ -1.28
SF3B3-201ENST00000302516 PIGCQ92535 297 aa7.04□□□□□ -1.28
SF3B3-201ENST00000302516 DNAJA3Q96EY1 480 aa7.04□□□□□ -1.28
SF3B3-201ENST00000302516 CTRCQ99895 268 aa7.04□□□□□ -1.28
SF3B3-201ENST00000302516 PIGQQ9BRB3 760 aa7.04□□□□□ -1.28
SF3B3-201ENST00000302516 DNAJC25-GNG10A0A024R161 153 aa7.04□□□□□ -1.28
SF3B3-201ENST00000302516 IGLV3-10A0A075B6K4 115 aa7.04□□□□□ -1.28
SF3B3-201ENST00000302516 LRRC30A6NM36 301 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms