RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 SCP2D1Q9UJQ7 156 aa19.81■□□□□ 0.76
TPM4-201ENST00000300933 ACOD1A6NK06 481 aa19.81■□□□□ 0.76
TPM4-201ENST00000300933 SDHAP31040 664 aa19.81■□□□□ 0.76
TPM4-201ENST00000300933 CENPAP49450 140 aa19.81■□□□□ 0.76
TPM4-201ENST00000300933 RPS11P62280 158 aaKnown RBP eCLIP19.81■□□□□ 0.76
TPM4-201ENST00000300933 TUSC1Q2TAM9 212 aa19.81■□□□□ 0.76
TPM4-201ENST00000300933 ADAMTS14Q8WXS8 1223 aa19.81■□□□□ 0.76
TPM4-201ENST00000300933 KLHL15Q96M94 604 aa19.81■□□□□ 0.76
TPM4-201ENST00000300933 RXFP3Q9NSD7 469 aa19.81■□□□□ 0.76
TPM4-201ENST00000300933 SLC6A5Q9Y345 797 aa19.81■□□□□ 0.76
TPM4-201ENST00000300933 FKBP7Q9Y680 259 aa19.81■□□□□ 0.76
TPM4-201ENST00000300933 POM121CA8CG34 1229 aa19.8■□□□□ 0.76
TPM4-201ENST00000300933 BET1O15155 118 aa19.8■□□□□ 0.76
TPM4-201ENST00000300933 SLC25A12O75746 678 aa19.8■□□□□ 0.76
TPM4-201ENST00000300933 GLCEO94923 617 aa19.8■□□□□ 0.76
TPM4-201ENST00000300933 GP1BBP13224 206 aa19.8■□□□□ 0.76
TPM4-201ENST00000300933 DCAF7P61962 342 aa19.8■□□□□ 0.76
TPM4-201ENST00000300933 NR0B2Q15466 257 aa19.8■□□□□ 0.76
TPM4-201ENST00000300933 LPAL2Q16609 132 aa19.8■□□□□ 0.76
TPM4-201ENST00000300933 SFRP4Q6FHJ7 346 aaPredicted RBP19.8■□□□□ 0.76
TPM4-201ENST00000300933 NLRC3Q7RTR2 1065 aa19.8■□□□□ 0.76
TPM4-201ENST00000300933 ANKRD37Q7Z713 158 aa19.8■□□□□ 0.76
TPM4-201ENST00000300933 CARFQ8N187 725 aa19.8■□□□□ 0.76
TPM4-201ENST00000300933 GPR119Q8TDV5 335 aa19.8■□□□□ 0.76
TPM4-201ENST00000300933 SMIM19Q96E16 107 aa19.8■□□□□ 0.76
TPM4-201ENST00000300933 SLC25A18Q9H1K4 315 aa19.8■□□□□ 0.76
TPM4-201ENST00000300933 VDAC3Q9Y277 283 aa19.8■□□□□ 0.76
TPM4-201ENST00000300933 HRH3Q9Y5N1 445 aa19.8■□□□□ 0.76
TPM4-201ENST00000300933 A0A0G2JK05 382 aa19.8■□□□□ 0.76
TPM4-201ENST00000300933 A0A1B0GTQ1 180 aa19.8■□□□□ 0.76
TPM4-201ENST00000300933 A0A1B0GVI7 797 aa19.8■□□□□ 0.76
TPM4-201ENST00000300933 ZNF593O00488 134 aaPredicted RBP19.8■□□□□ 0.76
TPM4-201ENST00000300933 SUSD5O60279 629 aa19.8■□□□□ 0.76
TPM4-201ENST00000300933 SC5DO75845 299 aa19.8■□□□□ 0.76
TPM4-201ENST00000300933 OPN1LWP04000 364 aa19.8■□□□□ 0.76
TPM4-201ENST00000300933 GGTLC2Q14390 218 aa19.8■□□□□ 0.76
TPM4-201ENST00000300933 KMT5CQ86Y97 462 aa19.8■□□□□ 0.76
TPM4-201ENST00000300933 ZNF441Q8N8Z8 693 aa19.8■□□□□ 0.76
TPM4-201ENST00000300933 ST8SIA4Q92187 359 aa19.8■□□□□ 0.76
TPM4-201ENST00000300933 ZNF436Q9C0F3 470 aaPredicted RBP19.8■□□□□ 0.76
TPM4-201ENST00000300933 TSPAN10Q9H1Z9 355 aaPredicted RBP19.8■□□□□ 0.76
TPM4-201ENST00000300933 NPFFR2Q9Y5X5 522 aa19.8■□□□□ 0.76
TPM4-201ENST00000300933 G3V3Q6 166 aa19.79■□□□□ 0.76
TPM4-201ENST00000300933 FADS1O60427 444 aa19.79■□□□□ 0.76
TPM4-201ENST00000300933 GAAP10253 952 aa19.79■□□□□ 0.76
TPM4-201ENST00000300933 SNRPBP14678 240 aaKnown RBP19.79■□□□□ 0.76
TPM4-201ENST00000300933 BLVRAP53004 296 aa19.79■□□□□ 0.76
TPM4-201ENST00000300933 TAS2R43P59537 309 aa19.79■□□□□ 0.76
TPM4-201ENST00000300933 CFAP77Q6ZQR2 320 aa19.79■□□□□ 0.76
TPM4-201ENST00000300933 DPY19L4Q7Z388 723 aa19.79■□□□□ 0.76
TPM4-201ENST00000300933 PXKQ7Z7A4 578 aa19.79■□□□□ 0.76
TPM4-201ENST00000300933 PLPP5Q8NEB5 264 aa19.79■□□□□ 0.76
TPM4-201ENST00000300933 ADAD1Q96M93 576 aaKnown RBP19.79■□□□□ 0.76
TPM4-201ENST00000300933 GPX7Q96SL4 187 aaPredicted RBP19.79■□□□□ 0.76
TPM4-201ENST00000300933 PILRBQ9UKJ0 227 aa19.79■□□□□ 0.76
TPM4-201ENST00000300933 ADAMTS20P59510 1910 aa19.79■□□□□ 0.76
TPM4-201ENST00000300933 KIF26BQ2KJY2 2108 aa19.79■□□□□ 0.76
TPM4-201ENST00000300933 TMED7-TICAM2A0A0A6YYA0 188 aa19.79■□□□□ 0.76
TPM4-201ENST00000300933 PRKACAP17612 351 aa19.79■□□□□ 0.76
TPM4-201ENST00000300933 IL32P24001 234 aa19.79■□□□□ 0.76
TPM4-201ENST00000300933 PNLIPRP2P54317 469 aa19.79■□□□□ 0.76
TPM4-201ENST00000300933 SNTB2Q13425 540 aaKnown RBP19.79■□□□□ 0.76
TPM4-201ENST00000300933 PMS2CLQ68D20 193 aa19.79■□□□□ 0.76
TPM4-201ENST00000300933 DEFB123Q8N688 67 aa19.79■□□□□ 0.76
TPM4-201ENST00000300933 OR2T4Q8NH00 348 aa19.79■□□□□ 0.76
TPM4-201ENST00000300933 SMOC1Q9H4F8 434 aa19.79■□□□□ 0.76
TPM4-201ENST00000300933 SDHAF2Q9NX18 166 aa19.79■□□□□ 0.76
TPM4-201ENST00000300933 MED11Q9P086 117 aa19.79■□□□□ 0.76
TPM4-201ENST00000300933 TMED7Q9Y3B3 224 aa19.79■□□□□ 0.76
TPM4-201ENST00000300933 hCG_1807616A0A1W2PRN6 198 aa19.79■□□□□ 0.76
TPM4-201ENST00000300933 OGG1O15527 345 aa19.79■□□□□ 0.76
TPM4-201ENST00000300933 AKR7A3O95154 331 aa19.79■□□□□ 0.76
TPM4-201ENST00000300933 ALDOBP05062 364 aa19.79■□□□□ 0.76
TPM4-201ENST00000300933 FCER2P06734 321 aa19.79■□□□□ 0.76
TPM4-201ENST00000300933 PGCP20142 388 aa19.79■□□□□ 0.76
TPM4-201ENST00000300933 ACTA2P62736 377 aa19.79■□□□□ 0.76
TPM4-201ENST00000300933 ACTG2P63267 376 aa19.79■□□□□ 0.76
TPM4-201ENST00000300933 ETFDHQ16134 617 aa19.79■□□□□ 0.76
TPM4-201ENST00000300933 LRRC69Q6ZNQ3 347 aa19.79■□□□□ 0.76
TPM4-201ENST00000300933 OR6N2Q8NGY6 317 aa19.79■□□□□ 0.76
TPM4-201ENST00000300933 FBXW5Q969U6 566 aa19.79■□□□□ 0.76
TPM4-201ENST00000300933 PTDSS2Q9BVG9 487 aa19.79■□□□□ 0.76
TPM4-201ENST00000300933 RABL2AQ9UBK7 228 aaPredicted RBP19.79■□□□□ 0.76
TPM4-201ENST00000300933 FREM3P0C091 2139 aa19.78■□□□□ 0.76
TPM4-201ENST00000300933 TRBV11-1A0A0K0K1C0 115 aa19.78■□□□□ 0.76
TPM4-201ENST00000300933 TO15178 435 aa19.78■□□□□ 0.76
TPM4-201ENST00000300933 BGLAPP02818 100 aa19.78■□□□□ 0.76
TPM4-201ENST00000300933 INPP5JQ15735 1006 aaPredicted RBP19.78■□□□□ 0.76
TPM4-201ENST00000300933 PAPD4Q6PIY7 484 aaKnown RBP19.78■□□□□ 0.76
TPM4-201ENST00000300933 SLC43A2Q8N370 569 aa19.78■□□□□ 0.76
TPM4-201ENST00000300933 CXorf58Q96LI9 332 aa19.78■□□□□ 0.76
TPM4-201ENST00000300933 AUNIPQ9H7T9 357 aa19.78■□□□□ 0.76
TPM4-201ENST00000300933 SUSD2Q9UGT4 822 aa19.78■□□□□ 0.76
TPM4-201ENST00000300933 FBXO9Q9UK97 447 aaPredicted RBP19.78■□□□□ 0.76
TPM4-201ENST00000300933 RARRES3Q9UL19 164 aa19.78■□□□□ 0.76
TPM4-201ENST00000300933 KCNMB2Q9Y691 235 aa19.78■□□□□ 0.76
TPM4-201ENST00000300933 NUP210LQ5VU65 1888 aa19.78■□□□□ 0.76
TPM4-201ENST00000300933 LGALS8O00214 317 aa19.78■□□□□ 0.76
TPM4-201ENST00000300933 ZFPL1O95159 310 aa19.78■□□□□ 0.76
TPM4-201ENST00000300933 HLA-DOBP13765 273 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms