RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 TEKQ02763 1124 aa12.31□□□□□ -0.44
HPS3-201ENST00000296051 AWAT2Q6E213 333 aa12.31□□□□□ -0.44
HPS3-201ENST00000296051 FBXL6Q8N531 539 aa12.31□□□□□ -0.44
HPS3-201ENST00000296051 FAM71F1Q96KD3 344 aaPredicted RBP12.31□□□□□ -0.44
HPS3-201ENST00000296051 WISP3O95389 354 aaPredicted RBP12.31□□□□□ -0.44
HPS3-201ENST00000296051 TSPAN15O95858 294 aa12.31□□□□□ -0.44
HPS3-201ENST00000296051 WDPCPO95876 746 aa12.31□□□□□ -0.44
HPS3-201ENST00000296051 IGHA2P01877 340 aa12.31□□□□□ -0.44
HPS3-201ENST00000296051 ACSM4P0C7M7 580 aa12.31□□□□□ -0.44
HPS3-201ENST00000296051 OR2T7P0C7T2 308 aa12.31□□□□□ -0.44
HPS3-201ENST00000296051 METAP1P53582 386 aa12.31□□□□□ -0.44
HPS3-201ENST00000296051 FAM189A2Q15884 450 aa12.31□□□□□ -0.44
HPS3-201ENST00000296051 ST3GAL2Q16842 350 aa12.31□□□□□ -0.44
HPS3-201ENST00000296051 ABHD17CQ6PCB6 329 aa12.31□□□□□ -0.44
HPS3-201ENST00000296051 BEND4Q6ZU67 534 aa12.31□□□□□ -0.44
HPS3-201ENST00000296051 PM20D2Q8IYS1 436 aa12.31□□□□□ -0.44
HPS3-201ENST00000296051 OR2T27Q8NH04 317 aa12.31□□□□□ -0.44
HPS3-201ENST00000296051 SLC35A4Q96G79 324 aa12.31□□□□□ -0.44
HPS3-201ENST00000296051 SCGB3A2Q96PL1 93 aa12.31□□□□□ -0.44
HPS3-201ENST00000296051 HRASLSQ9HDD0 168 aa12.31□□□□□ -0.44
HPS3-201ENST00000296051 SLC23A2Q9UGH3 650 aa12.31□□□□□ -0.44
HPS3-201ENST00000296051 MRPS2Q9Y399 296 aaKnown RBP12.31□□□□□ -0.44
HPS3-201ENST00000296051 MTCH2Q9Y6C9 303 aa12.31□□□□□ -0.44
HPS3-201ENST00000296051 FFAR1O14842 300 aa12.31□□□□□ -0.44
HPS3-201ENST00000296051 CDK2P24941 298 aa12.31□□□□□ -0.44
HPS3-201ENST00000296051 ADH6P28332 368 aa12.31□□□□□ -0.44
HPS3-201ENST00000296051 POU3F1Q03052 451 aaPredicted RBP12.31□□□□□ -0.44
HPS3-201ENST00000296051 BCL2A1Q16548 175 aa12.31□□□□□ -0.44
HPS3-201ENST00000296051 HACD4Q5VWC8 232 aa12.31□□□□□ -0.44
HPS3-201ENST00000296051 SLC18B1Q6NT16 456 aa12.31□□□□□ -0.44
HPS3-201ENST00000296051 COX15Q7KZN9 410 aa12.31□□□□□ -0.44
HPS3-201ENST00000296051 SVBPQ8N300 66 aa12.31□□□□□ -0.44
HPS3-201ENST00000296051 INTS14Q96SY0 518 aa12.31□□□□□ -0.44
HPS3-201ENST00000296051 SLC6A20Q9NP91 592 aa12.31□□□□□ -0.44
HPS3-201ENST00000296051 DNAJB11Q9UBS4 358 aa12.31□□□□□ -0.44
HPS3-201ENST00000296051 TRIP12Q14669 1992 aaPredicted RBP12.31□□□□□ -0.44
HPS3-201ENST00000296051 KCNE1BA0A087WTH5 132 aa12.31□□□□□ -0.44
HPS3-201ENST00000296051 LRIT2A6NDA9 550 aa12.31□□□□□ -0.44
HPS3-201ENST00000296051 NRG2O14511 850 aaPredicted RBP12.31□□□□□ -0.44
HPS3-201ENST00000296051 PNMTP11086 282 aa12.31□□□□□ -0.44
HPS3-201ENST00000296051 MRPL19P49406 292 aaKnown RBP12.31□□□□□ -0.44
HPS3-201ENST00000296051 STEAP1BQ6NZ63 245 aa12.31□□□□□ -0.44
HPS3-201ENST00000296051 MRPL21Q7Z2W9 205 aaKnown RBP12.31□□□□□ -0.44
HPS3-201ENST00000296051 CMIPQ8IY22 773 aa12.31□□□□□ -0.44
HPS3-201ENST00000296051 SLC35F3Q8IY50 421 aa12.31□□□□□ -0.44
HPS3-201ENST00000296051 OR4Q3Q8NH05 313 aa12.31□□□□□ -0.44
HPS3-201ENST00000296051 ZNF707Q96C28 371 aaPredicted RBP12.31□□□□□ -0.44
HPS3-201ENST00000296051 ZC3HAV1LQ96H79 300 aaKnown RBP12.31□□□□□ -0.44
HPS3-201ENST00000296051 OR10A5Q9H207 317 aa12.31□□□□□ -0.44
HPS3-201ENST00000296051 ZNF160Q9HCG1 818 aa12.31□□□□□ -0.44
HPS3-201ENST00000296051 INPP5EQ9NRR6 644 aa12.31□□□□□ -0.44
HPS3-201ENST00000296051 FBXL4Q9UKA2 621 aa12.31□□□□□ -0.44
HPS3-201ENST00000296051 SCN3AQ9NY46 2000 aa12.3□□□□□ -0.44
HPS3-201ENST00000296051 UBR3Q6ZT12 1888 aa12.3□□□□□ -0.44
HPS3-201ENST00000296051 MSL3P1P0C860 447 aa12.3□□□□□ -0.44
HPS3-201ENST00000296051 RD3LP0DJH9 198 aa12.3□□□□□ -0.44
HPS3-201ENST00000296051 ACHEP22303 614 aa12.3□□□□□ -0.44
HPS3-201ENST00000296051 THBS2P35442 1172 aa12.3□□□□□ -0.44
HPS3-201ENST00000296051 CAMLGP49069 296 aa12.3□□□□□ -0.44
HPS3-201ENST00000296051 DCAF7P61962 342 aa12.3□□□□□ -0.44
HPS3-201ENST00000296051 MRPS10P82664 201 aaKnown RBP12.3□□□□□ -0.44
HPS3-201ENST00000296051 C12orf73Q69YU5 71 aa12.3□□□□□ -0.44
HPS3-201ENST00000296051 MFSD12Q6NUT3 480 aa12.3□□□□□ -0.44
HPS3-201ENST00000296051 NIPAL3Q6P499 406 aa12.3□□□□□ -0.44
HPS3-201ENST00000296051 ZNF836Q6ZNA1 936 aa12.3□□□□□ -0.44
HPS3-201ENST00000296051 TRAPPC6BQ86SZ2 158 aa12.3□□□□□ -0.44
HPS3-201ENST00000296051 PLPP6Q8IY26 295 aa12.3□□□□□ -0.44
HPS3-201ENST00000296051 SCARB1Q8WTV0 552 aa12.3□□□□□ -0.44
HPS3-201ENST00000296051 FOXRED1Q96CU9 486 aaPredicted RBP12.3□□□□□ -0.44
HPS3-201ENST00000296051 MENTQ9BUN1 341 aa12.3□□□□□ -0.44
HPS3-201ENST00000296051 ULBP2Q9BZM5 246 aa12.3□□□□□ -0.44
HPS3-201ENST00000296051 APMAPQ9HDC9 416 aa12.3□□□□□ -0.44
HPS3-201ENST00000296051 NGBQ9NPG2 151 aa12.3□□□□□ -0.44
HPS3-201ENST00000296051 ING1Q9UK53 422 aaPredicted RBP12.3□□□□□ -0.44
HPS3-201ENST00000296051 SNAPC5O75971 98 aa12.3□□□□□ -0.44
HPS3-201ENST00000296051 CD160O95971 181 aa12.3□□□□□ -0.44
HPS3-201ENST00000296051 TMEM225BP0DP42 221 aa12.3□□□□□ -0.44
HPS3-201ENST00000296051 GLB1P16278 677 aa12.3□□□□□ -0.44
HPS3-201ENST00000296051 MAP2K6P52564 334 aa12.3□□□□□ -0.44
HPS3-201ENST00000296051 CLVS2Q5SYC1 327 aa12.3□□□□□ -0.44
HPS3-201ENST00000296051 ASTLQ6HA08 431 aaPredicted RBP12.3□□□□□ -0.44
HPS3-201ENST00000296051 SLC48A1Q6P1K1 146 aa12.3□□□□□ -0.44
HPS3-201ENST00000296051 OR5M1Q8NGP8 315 aa12.3□□□□□ -0.44
HPS3-201ENST00000296051 STT3BQ8TCJ2 826 aa12.3□□□□□ -0.44
HPS3-201ENST00000296051 ZNF845Q96IR2 970 aaPredicted RBP12.3□□□□□ -0.44
HPS3-201ENST00000296051 WDFY2Q96P53 400 aa12.3□□□□□ -0.44
HPS3-201ENST00000296051 ZNF442Q9H7R0 627 aa12.3□□□□□ -0.44
HPS3-201ENST00000296051 CALHM2Q9HA72 323 aa12.3□□□□□ -0.44
HPS3-201ENST00000296051 CGGBP1Q9UFW8 167 aaPredicted RBP12.3□□□□□ -0.44
HPS3-201ENST00000296051 GPR55Q9Y2T6 319 aaPredicted RBP12.3□□□□□ -0.44
HPS3-201ENST00000296051 SYT5O00445 386 aa12.3□□□□□ -0.44
HPS3-201ENST00000296051 SURF4O15260 269 aa12.3□□□□□ -0.44
HPS3-201ENST00000296051 GPRIN2O60269 458 aa12.3□□□□□ -0.44
HPS3-201ENST00000296051 WNT1P04628 370 aa12.3□□□□□ -0.44
HPS3-201ENST00000296051 HERV-K104P61576 105 aa12.3□□□□□ -0.44
HPS3-201ENST00000296051 LIPNQ5VXI9 398 aa12.3□□□□□ -0.44
HPS3-201ENST00000296051 SLC51BQ86UW2 128 aa12.3□□□□□ -0.44
HPS3-201ENST00000296051 CNRIP1Q96F85 164 aaPredicted RBP12.3□□□□□ -0.44
HPS3-201ENST00000296051 MARVELD1Q9BSK0 173 aa12.3□□□□□ -0.44
HPS3-201ENST00000296051 BTBD2Q9BX70 525 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms