RNA–Protein interactions for RNA: ENST00000292510.5

VPS28-201, Transcript of VPS28, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS28, Length 979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-201ENST00000292510 NPRL3Q12980 569 aa11.64□□□□□ -0.55
VPS28-201ENST00000292510 KRR1Q13601 381 aaKnown RBP11.64□□□□□ -0.55
VPS28-201ENST00000292510 KEAP1Q14145 624 aa11.64□□□□□ -0.55
VPS28-201ENST00000292510 MICAQ29983 383 aa11.64□□□□□ -0.55
VPS28-201ENST00000292510 RFX4Q33E94 735 aa11.64□□□□□ -0.55
VPS28-201ENST00000292510 ZNF672Q499Z4 452 aaPredicted RBP11.64□□□□□ -0.55
VPS28-201ENST00000292510 C10orf128Q5T292 105 aa11.64□□□□□ -0.55
VPS28-201ENST00000292510 FAM205BPQ63HN1 556 aa11.64□□□□□ -0.55
VPS28-201ENST00000292510 SLC25A47Q6Q0C1 308 aa11.64□□□□□ -0.55
VPS28-201ENST00000292510 SLC22A25Q6T423 547 aa11.64□□□□□ -0.55
VPS28-201ENST00000292510 B3GLCTQ6Y288 498 aa11.64□□□□□ -0.55
VPS28-201ENST00000292510 HS3ST5Q8IZT8 346 aa11.64□□□□□ -0.55
VPS28-201ENST00000292510 SLC22A24Q8N4F4 322 aa11.64□□□□□ -0.55
VPS28-201ENST00000292510 AQP11Q8NBQ7 271 aa11.64□□□□□ -0.55
VPS28-201ENST00000292510 OR10G2Q8NGC3 310 aa11.64□□□□□ -0.55
VPS28-201ENST00000292510 GTPBP3Q969Y2 492 aaKnown RBP11.64□□□□□ -0.55
VPS28-201ENST00000292510 NDEL1Q9GZM8 345 aa11.64□□□□□ -0.55
VPS28-201ENST00000292510 B3GNT2Q9NY97 397 aa11.64□□□□□ -0.55
VPS28-201ENST00000292510 CRNNQ9UBG3 495 aaPredicted RBP11.64□□□□□ -0.55
VPS28-201ENST00000292510 UGT2A1Q9Y4X1 527 aa11.64□□□□□ -0.55
VPS28-201ENST00000292510 PLCE1Q9P212 2302 aa11.63□□□□□ -0.55
VPS28-201ENST00000292510 SLC22A23A1A5C7 686 aa11.63□□□□□ -0.55
VPS28-201ENST00000292510 ATP6V1G2-DDX39BF2Z307 99 aa11.63□□□□□ -0.55
VPS28-201ENST00000292510 XKRYO14609 159 aa11.63□□□□□ -0.55
VPS28-201ENST00000292510 TIPRLO75663 272 aa11.63□□□□□ -0.55
VPS28-201ENST00000292510 IGKV3-15P01624 115 aa11.63□□□□□ -0.55
VPS28-201ENST00000292510 CECR9P0C854 216 aa11.63□□□□□ -0.55
VPS28-201ENST00000292510 CBR1P16152 277 aa11.63□□□□□ -0.55
VPS28-201ENST00000292510 SDHAP31040 664 aa11.63□□□□□ -0.55
VPS28-201ENST00000292510 GIPRP48546 466 aa11.63□□□□□ -0.55
VPS28-201ENST00000292510 DBPQ10586 325 aaPredicted RBP11.63□□□□□ -0.55
VPS28-201ENST00000292510 CCNIQ14094 377 aa11.63□□□□□ -0.55
VPS28-201ENST00000292510 CLEC12AQ5QGZ9 265 aa11.63□□□□□ -0.55
VPS28-201ENST00000292510 THEM4Q5T1C6 240 aa11.63□□□□□ -0.55
VPS28-201ENST00000292510 DPY19L2P2Q6ZN68 376 aa11.63□□□□□ -0.55
VPS28-201ENST00000292510 ZNF620Q6ZNG0 422 aa11.63□□□□□ -0.55
VPS28-201ENST00000292510 PTCHD4Q6ZW05 846 aa11.63□□□□□ -0.55
VPS28-201ENST00000292510 LRRC18Q8N456 261 aa11.63□□□□□ -0.55
VPS28-201ENST00000292510 LINC00471Q8N535 108 aa11.63□□□□□ -0.55
VPS28-201ENST00000292510 PAPD5Q8NDF8 572 aaKnown RBP11.63□□□□□ -0.55
VPS28-201ENST00000292510 NINJ1Q92982 152 aa11.63□□□□□ -0.55
VPS28-201ENST00000292510 MS4A3Q96HJ5 214 aa11.63□□□□□ -0.55
VPS28-201ENST00000292510 RADILQ96JH8 1075 aa11.63□□□□□ -0.55
VPS28-201ENST00000292510 ERMAPQ96PL5 475 aaPredicted RBP11.63□□□□□ -0.55
VPS28-201ENST00000292510 RBP7Q96R05 134 aa11.63□□□□□ -0.55
VPS28-201ENST00000292510 NIPSNAP1Q9BPW8 284 aa11.63□□□□□ -0.55
VPS28-201ENST00000292510 IFT27Q9BW83 186 aa11.63□□□□□ -0.55
VPS28-201ENST00000292510 PLA2G12AQ9BZM1 189 aa11.63□□□□□ -0.55
VPS28-201ENST00000292510 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.63□□□□□ -0.55
VPS28-201ENST00000292510 POU2F3Q9UKI9 436 aa11.63□□□□□ -0.55
VPS28-201ENST00000292510 MOKQ9UQ07 419 aa11.63□□□□□ -0.55
VPS28-201ENST00000292510 MGAT4BQ9UQ53 548 aa11.63□□□□□ -0.55
VPS28-201ENST00000292510 RAI1Q7Z5J4 1906 aaPredicted RBP11.62□□□□□ -0.55
VPS28-201ENST00000292510 PRSS37A4D1T9 235 aa11.62□□□□□ -0.55
VPS28-201ENST00000292510 E7EQL1 145 aa11.62□□□□□ -0.55
VPS28-201ENST00000292510 SOX14O95416 240 aa11.62□□□□□ -0.55
VPS28-201ENST00000292510 IGLV1-44P01699 117 aa11.62□□□□□ -0.55
VPS28-201ENST00000292510 OR8G3PP0DMU2 310 aa11.62□□□□□ -0.55
VPS28-201ENST00000292510 CALCRP30988 508 aa11.62□□□□□ -0.55
VPS28-201ENST00000292510 SLC6A6P31641 620 aa11.62□□□□□ -0.55
VPS28-201ENST00000292510 CDKN2AP42771 156 aaKnown RBP11.62□□□□□ -0.55
VPS28-201ENST00000292510 PTDSS1P48651 473 aaKnown RBP11.62□□□□□ -0.55
VPS28-201ENST00000292510 RPS6KA3P51812 740 aa11.62□□□□□ -0.55
VPS28-201ENST00000292510 RAB1AP62820 205 aa11.62□□□□□ -0.55
VPS28-201ENST00000292510 ETFDHQ16134 617 aa11.62□□□□□ -0.55
VPS28-201ENST00000292510 GSG1Q2KHT4 349 aa11.62□□□□□ -0.55
VPS28-201ENST00000292510 C1QTNF12Q5T7M4 302 aa11.62□□□□□ -0.55
VPS28-201ENST00000292510 GPR139Q6DWJ6 353 aa11.62□□□□□ -0.55
VPS28-201ENST00000292510 CCDC36Q8IYA8 594 aa11.62□□□□□ -0.55
VPS28-201ENST00000292510 ZNF611Q8N823 705 aa11.62□□□□□ -0.55
VPS28-201ENST00000292510 OR8D4Q8NGM9 314 aa11.62□□□□□ -0.55
VPS28-201ENST00000292510 GIPC3Q8TF64 312 aa11.62□□□□□ -0.55
VPS28-201ENST00000292510 NANOS1Q8WY41 292 aaKnown RBP11.62□□□□□ -0.55
VPS28-201ENST00000292510 FBXW5Q969U6 566 aa11.62□□□□□ -0.55
VPS28-201ENST00000292510 NABP1Q96AH0 204 aa11.62□□□□□ -0.55
VPS28-201ENST00000292510 FOXN4Q96NZ1 517 aa11.62□□□□□ -0.55
VPS28-201ENST00000292510 CCL19Q99731 98 aa11.62□□□□□ -0.55
VPS28-201ENST00000292510 SYT4Q9H2B2 425 aa11.62□□□□□ -0.55
VPS28-201ENST00000292510 DENND2DQ9H6A0 471 aaPredicted RBP11.62□□□□□ -0.55
VPS28-201ENST00000292510 YY1AP1Q9H869 796 aa11.62□□□□□ -0.55
VPS28-201ENST00000292510 SMURF2Q9HAU4 748 aa11.62□□□□□ -0.55
VPS28-201ENST00000292510 NTN4Q9HB63 628 aa11.62□□□□□ -0.55
VPS28-201ENST00000292510 CISD1Q9NZ45 108 aaKnown RBP11.62□□□□□ -0.55
VPS28-201ENST00000292510 PDP1Q9P0J1 537 aaPredicted RBP11.62□□□□□ -0.55
VPS28-201ENST00000292510 DNAJB9Q9UBS3 223 aa11.62□□□□□ -0.55
VPS28-201ENST00000292510 ATP23Q9Y6H3 246 aa11.62□□□□□ -0.55
VPS28-201ENST00000292510 CDH10Q9Y6N8 788 aa11.62□□□□□ -0.55
VPS28-201ENST00000292510 CELSR1Q9NYQ6 3014 aa11.62□□□□□ -0.55
VPS28-201ENST00000292510 A0A1W2PPL8 197 aa11.61□□□□□ -0.55
VPS28-201ENST00000292510 E2F6O75461 281 aa11.61□□□□□ -0.55
VPS28-201ENST00000292510 CIB2O75838 187 aa11.61□□□□□ -0.55
VPS28-201ENST00000292510 UBL3O95164 117 aa11.61□□□□□ -0.55
VPS28-201ENST00000292510 FARS2O95363 451 aaKnown RBP11.61□□□□□ -0.55
VPS28-201ENST00000292510 TXNDC12O95881 172 aa11.61□□□□□ -0.55
VPS28-201ENST00000292510 SOD3P08294 240 aa11.61□□□□□ -0.55
VPS28-201ENST00000292510 NR2C1P13056 603 aa11.61□□□□□ -0.55
VPS28-201ENST00000292510 CTLA4P16410 223 aa11.61□□□□□ -0.55
VPS28-201ENST00000292510 HOXB6P17509 224 aaKnown RBP11.61□□□□□ -0.55
VPS28-201ENST00000292510 PRKACGP22612 351 aa11.61□□□□□ -0.55
VPS28-201ENST00000292510 ARR3P36575 388 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms