RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 SRPK3Q9UPE1 567 aa15.15■□□□□ 0.02
SH3RF1-201ENST00000284637 HCFC2Q9Y5Z7 792 aa15.15■□□□□ 0.02
SH3RF1-201ENST00000284637 A6NCN8 305 aa15.14■□□□□ 0.01
SH3RF1-201ENST00000284637 ZAR1LA6NP61 321 aa15.14■□□□□ 0.01
SH3RF1-201ENST00000284637 HSBP1L1C9JCN9 74 aa15.14■□□□□ 0.01
SH3RF1-201ENST00000284637 CD1EP15812 388 aa15.14■□□□□ 0.01
SH3RF1-201ENST00000284637 MAP2K6P52564 334 aa15.14■□□□□ 0.01
SH3RF1-201ENST00000284637 FAM219BQ5XKK7 198 aa15.14■□□□□ 0.01
SH3RF1-201ENST00000284637 RHOUQ7L0Q8 258 aa15.14■□□□□ 0.01
SH3RF1-201ENST00000284637 KIAA0907Q7Z7F0 614 aaPredicted RBP15.14■□□□□ 0.01
SH3RF1-201ENST00000284637 SKA3Q8IX90 412 aa15.14■□□□□ 0.01
SH3RF1-201ENST00000284637 KIAA1958Q8N8K9 716 aa15.14■□□□□ 0.01
SH3RF1-201ENST00000284637 ARSGQ96EG1 525 aa15.14■□□□□ 0.01
SH3RF1-201ENST00000284637 GAR1Q9NY12 217 aaKnown RBP15.14■□□□□ 0.01
SH3RF1-201ENST00000284637 ACAD8Q9UKU7 415 aa15.14■□□□□ 0.01
SH3RF1-201ENST00000284637 LOC100289279A0A1B0GTE1 492 aa15.14■□□□□ 0.01
SH3RF1-201ENST00000284637 TMEM200CA6NKL6 621 aa15.14■□□□□ 0.01
SH3RF1-201ENST00000284637 HMGN4O00479 90 aa15.14■□□□□ 0.01
SH3RF1-201ENST00000284637 TAGLN2P37802 199 aaKnown RBP15.14■□□□□ 0.01
SH3RF1-201ENST00000284637 DCAF7P61962 342 aa15.14■□□□□ 0.01
SH3RF1-201ENST00000284637 CST9LP1Q5W188 147 aa15.14■□□□□ 0.01
SH3RF1-201ENST00000284637 ACOT7LQ6ZUV0 252 aa15.14■□□□□ 0.01
SH3RF1-201ENST00000284637 OR11A1Q9GZK7 315 aa15.14■□□□□ 0.01
SH3RF1-201ENST00000284637 POFUT1Q9H488 388 aa15.14■□□□□ 0.01
SH3RF1-201ENST00000284637 ZNF385DQ9H6B1 395 aa15.14■□□□□ 0.01
SH3RF1-201ENST00000284637 LRIT1Q9P2V4 623 aa15.14■□□□□ 0.01
SH3RF1-201ENST00000284637 BHLHE40O14503 412 aa15.14■□□□□ 0.01
SH3RF1-201ENST00000284637 CPN1P15169 458 aa15.14■□□□□ 0.01
SH3RF1-201ENST00000284637 PTAFRP25105 342 aa15.14■□□□□ 0.01
SH3RF1-201ENST00000284637 ZNF93P35789 620 aaPredicted RBP15.14■□□□□ 0.01
SH3RF1-201ENST00000284637 CLEC9AQ6UXN8 241 aa15.14■□□□□ 0.01
SH3RF1-201ENST00000284637 KCNRGQ8N5I3 272 aa15.14■□□□□ 0.01
SH3RF1-201ENST00000284637 SEMA4CQ9C0C4 833 aa15.14■□□□□ 0.01
SH3RF1-201ENST00000284637 ANKRD61A6NGH8 418 aa15.14■□□□□ 0.01
SH3RF1-201ENST00000284637 ARGFXA6NJG6 315 aa15.14■□□□□ 0.01
SH3RF1-201ENST00000284637 SNRPGP15A8MWD9 76 aa15.14■□□□□ 0.01
SH3RF1-201ENST00000284637 SIGLEC6O43699 453 aa15.14■□□□□ 0.01
SH3RF1-201ENST00000284637 DUSP5Q16690 384 aa15.14■□□□□ 0.01
SH3RF1-201ENST00000284637 KCNIP4Q6PIL6 250 aa15.14■□□□□ 0.01
SH3RF1-201ENST00000284637 UQCC3Q6UW78 93 aa15.14■□□□□ 0.01
SH3RF1-201ENST00000284637 PSMF1Q92530 271 aa15.14■□□□□ 0.01
SH3RF1-201ENST00000284637 ENKD1Q9H0I2 346 aa15.14■□□□□ 0.01
SH3RF1-201ENST00000284637 SLC5A10A0PJK1 596 aa15.13■□□□□ 0.01
SH3RF1-201ENST00000284637 HCRTR1O43613 425 aa15.13■□□□□ 0.01
SH3RF1-201ENST00000284637 UTS2O95399 124 aa15.13■□□□□ 0.01
SH3RF1-201ENST00000284637 GNB3P16520 340 aa15.13■□□□□ 0.01
SH3RF1-201ENST00000284637 HTR5AP47898 357 aa15.13■□□□□ 0.01
SH3RF1-201ENST00000284637 BIDP55957 195 aa15.13■□□□□ 0.01
SH3RF1-201ENST00000284637 TAS2R30P59541 319 aa15.13■□□□□ 0.01
SH3RF1-201ENST00000284637 FAM78AQ5JUQ0 283 aa15.13■□□□□ 0.01
SH3RF1-201ENST00000284637 OR52W1Q6IF63 320 aa15.13■□□□□ 0.01
SH3RF1-201ENST00000284637 SLC22A24Q8N4F4 322 aa15.13■□□□□ 0.01
SH3RF1-201ENST00000284637 CPNE4Q96A23 557 aaPredicted RBP15.13■□□□□ 0.01
SH3RF1-201ENST00000284637 PARP12Q9H0J9 701 aaKnown RBP15.13■□□□□ 0.01
SH3RF1-201ENST00000284637 LMAN1LQ9HAT1 526 aa15.13■□□□□ 0.01
SH3RF1-201ENST00000284637 TMED7-TICAM2A0A0A6YYA0 188 aa15.13■□□□□ 0.01
SH3RF1-201ENST00000284637 BLACEA4D250 179 aa15.13■□□□□ 0.01
SH3RF1-201ENST00000284637 DFFBO76075 338 aa15.13■□□□□ 0.01
SH3RF1-201ENST00000284637 ZFAND5O76080 213 aa15.13■□□□□ 0.01
SH3RF1-201ENST00000284637 TSPAN12O95859 305 aa15.13■□□□□ 0.01
SH3RF1-201ENST00000284637 RRASP10301 218 aa15.13■□□□□ 0.01
SH3RF1-201ENST00000284637 POU3F2P20265 443 aaPredicted RBP15.13■□□□□ 0.01
SH3RF1-201ENST00000284637 CLDN17P56750 224 aa15.13■□□□□ 0.01
SH3RF1-201ENST00000284637 COTL1Q14019 142 aa15.13■□□□□ 0.01
SH3RF1-201ENST00000284637 TRMT12Q53H54 448 aaKnown RBP15.13■□□□□ 0.01
SH3RF1-201ENST00000284637 CDCP1Q9H5V8 836 aa15.13■□□□□ 0.01
SH3RF1-201ENST00000284637 OPA3Q9H6K4 179 aa15.13■□□□□ 0.01
SH3RF1-201ENST00000284637 TMED7Q9Y3B3 224 aa15.13■□□□□ 0.01
SH3RF1-201ENST00000284637 TRAV36DV7A0A075B6V5 113 aa15.13■□□□□ 0.01
SH3RF1-201ENST00000284637 CBX7O95931 251 aa15.13■□□□□ 0.01
SH3RF1-201ENST00000284637 ZNF250P15622 560 aa15.13■□□□□ 0.01
SH3RF1-201ENST00000284637 CD80P33681 288 aa15.13■□□□□ 0.01
SH3RF1-201ENST00000284637 EEF1A2Q05639 463 aaKnown RBP15.13■□□□□ 0.01
SH3RF1-201ENST00000284637 MDGA2Q7Z553 956 aa15.13■□□□□ 0.01
SH3RF1-201ENST00000284637 PLEKHM1Q9Y4G2 1056 aa15.13■□□□□ 0.01
SH3RF1-201ENST00000284637 K7ESM1 405 aa15.13■□□□□ 0.01
SH3RF1-201ENST00000284637 GLCEO94923 617 aa15.13■□□□□ 0.01
SH3RF1-201ENST00000284637 OR2C1O95371 312 aa15.13■□□□□ 0.01
SH3RF1-201ENST00000284637 GDF1P27539 372 aa15.13■□□□□ 0.01
SH3RF1-201ENST00000284637 TMEM217Q8N7C4 229 aa15.13■□□□□ 0.01
SH3RF1-201ENST00000284637 C19orf47Q8N9M1 422 aaKnown RBP15.13■□□□□ 0.01
SH3RF1-201ENST00000284637 OR6S1Q8NH40 331 aa15.13■□□□□ 0.01
SH3RF1-201ENST00000284637 SLCO5A1Q9H2Y9 848 aa15.13■□□□□ 0.01
SH3RF1-201ENST00000284637 WSB2Q9NYS7 404 aaPredicted RBP15.13■□□□□ 0.01
SH3RF1-201ENST00000284637 TOPAZ1Q8N9V7 1692 aa15.12■□□□□ 0.01
SH3RF1-201ENST00000284637 NME1P15531 152 aaKnown RBP15.12■□□□□ 0.01
SH3RF1-201ENST00000284637 IL2RGP31785 369 aa15.12■□□□□ 0.01
SH3RF1-201ENST00000284637 FOLR3P41439 243 aa15.12■□□□□ 0.01
SH3RF1-201ENST00000284637 UBE2MP61081 183 aaKnown RBP15.12■□□□□ 0.01
SH3RF1-201ENST00000284637 PRAMEF20Q5VT98 475 aa15.12■□□□□ 0.01
SH3RF1-201ENST00000284637 LIPNQ5VXI9 398 aa15.12■□□□□ 0.01
SH3RF1-201ENST00000284637 SHEQ5VZ18 495 aa15.12■□□□□ 0.01
SH3RF1-201ENST00000284637 ADGRE4PQ86SQ3 457 aa15.12■□□□□ 0.01
SH3RF1-201ENST00000284637 ZNF251Q9BRH9 671 aa15.12■□□□□ 0.01
SH3RF1-201ENST00000284637 OR14J1Q9UGF5 321 aa15.12■□□□□ 0.01
SH3RF1-201ENST00000284637 H3BNC9 293 aa15.12■□□□□ 0.01
SH3RF1-201ENST00000284637 H3BQ06 376 aaPredicted RBP15.12■□□□□ 0.01
SH3RF1-201ENST00000284637 M0R082 166 aa15.12■□□□□ 0.01
SH3RF1-201ENST00000284637 HBE1P02100 147 aa15.12■□□□□ 0.01
SH3RF1-201ENST00000284637 PRSS36Q5K4E3 855 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms