RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 KRT74Q7RTS7 529 aa16.1■□□□□ 0.17
CAPN1-201ENST00000279247 KRT77Q7Z794 578 aa16.1■□□□□ 0.17
CAPN1-201ENST00000279247 RNF166Q96A37 237 aaPredicted RBP16.1■□□□□ 0.17
CAPN1-201ENST00000279247 CHCHD2Q9Y6H1 151 aaPredicted RBP16.1■□□□□ 0.17
CAPN1-201ENST00000279247 PLA2G10O15496 165 aa16.1■□□□□ 0.17
CAPN1-201ENST00000279247 NKX2-5P52952 324 aaPredicted RBP16.1■□□□□ 0.17
CAPN1-201ENST00000279247 ZNF684Q5T5D7 378 aa16.1■□□□□ 0.17
CAPN1-201ENST00000279247 OTOSQ8NHW6 89 aa16.1■□□□□ 0.17
CAPN1-201ENST00000279247 ENKURQ8TC29 256 aa16.1■□□□□ 0.17
CAPN1-201ENST00000279247 GCDHQ92947 438 aaPredicted RBP16.1■□□□□ 0.17
CAPN1-201ENST00000279247 CHST11Q9NPF2 352 aa16.1■□□□□ 0.17
CAPN1-201ENST00000279247 CENPMQ9NSP4 180 aa16.1■□□□□ 0.17
CAPN1-201ENST00000279247 PADI1Q9ULC6 663 aa16.1■□□□□ 0.17
CAPN1-201ENST00000279247 EEF1E1O43324 174 aaKnown RBP16.09■□□□□ 0.17
CAPN1-201ENST00000279247 LANCL1O43813 399 aa16.09■□□□□ 0.17
CAPN1-201ENST00000279247 EPXP11678 715 aa16.09■□□□□ 0.17
CAPN1-201ENST00000279247 HSF2Q03933 536 aa16.09■□□□□ 0.17
CAPN1-201ENST00000279247 TIPARPQ7Z3E1 657 aaKnown RBP16.09■□□□□ 0.17
CAPN1-201ENST00000279247 OR2M3Q8NG83 312 aa16.09■□□□□ 0.17
CAPN1-201ENST00000279247 OR2G2Q8NGZ5 317 aa16.09■□□□□ 0.17
CAPN1-201ENST00000279247 LGALS14Q8TCE9 139 aa16.09■□□□□ 0.17
CAPN1-201ENST00000279247 FKBP7Q9Y680 259 aa16.09■□□□□ 0.17
CAPN1-201ENST00000279247 TRABD2BA6NFA1 517 aa16.09■□□□□ 0.17
CAPN1-201ENST00000279247 ZNF814B7Z6K7 855 aa16.09■□□□□ 0.17
CAPN1-201ENST00000279247 TP53I11O14683 189 aa16.09■□□□□ 0.17
CAPN1-201ENST00000279247 FZD7O75084 574 aa16.09■□□□□ 0.17
CAPN1-201ENST00000279247 CD53P19397 219 aa16.09■□□□□ 0.17
CAPN1-201ENST00000279247 GPR85P60893 370 aa16.09■□□□□ 0.17
CAPN1-201ENST00000279247 TMEM225Q6GV28 225 aa16.09■□□□□ 0.17
CAPN1-201ENST00000279247 BPHLQ86WA6 291 aaPredicted RBP16.09■□□□□ 0.17
CAPN1-201ENST00000279247 RPS19BP1Q86WX3 136 aaKnown RBP16.09■□□□□ 0.17
CAPN1-201ENST00000279247 TSEN15Q8WW01 171 aaKnown RBP16.09■□□□□ 0.17
CAPN1-201ENST00000279247 IGHV3-15A0A0B4J1V0 119 aa16.08■□□□□ 0.17
CAPN1-201ENST00000279247 LIPT2A6NK58 231 aa16.08■□□□□ 0.17
CAPN1-201ENST00000279247 UCHL1P09936 223 aa16.08■□□□□ 0.17
CAPN1-201ENST00000279247 NAGAP17050 411 aa16.08■□□□□ 0.17
CAPN1-201ENST00000279247 GLO1Q04760 184 aa16.08■□□□□ 0.17
CAPN1-201ENST00000279247 ZNF528Q3MIS6 628 aa16.08■□□□□ 0.17
CAPN1-201ENST00000279247 CCDC58Q4VC31 144 aa16.08■□□□□ 0.17
CAPN1-201ENST00000279247 RAET1LQ5VY80 246 aa16.08■□□□□ 0.17
CAPN1-201ENST00000279247 ZNF517Q6ZMY9 492 aaPredicted RBP16.08■□□□□ 0.17
CAPN1-201ENST00000279247 TPRA1Q86W33 373 aa16.08■□□□□ 0.17
CAPN1-201ENST00000279247 IMMP1LQ96LU5 166 aa16.08■□□□□ 0.17
CAPN1-201ENST00000279247 TTYH2Q9BSA4 534 aa16.08■□□□□ 0.17
CAPN1-201ENST00000279247 PTGES2Q9H7Z7 377 aa16.08■□□□□ 0.17
CAPN1-201ENST00000279247 SEC61A2Q9H9S3 476 aa16.08■□□□□ 0.17
CAPN1-201ENST00000279247 TCF7L1Q9HCS4 588 aa16.08■□□□□ 0.17
CAPN1-201ENST00000279247 SERINC1Q9NRX5 453 aa16.08■□□□□ 0.17
CAPN1-201ENST00000279247 KLHL13Q9P2N7 655 aa16.08■□□□□ 0.17
CAPN1-201ENST00000279247 FBXL3Q9UKT7 428 aa16.08■□□□□ 0.17
CAPN1-201ENST00000279247 DOCK10Q96BY6 2186 aa16.08■□□□□ 0.16
CAPN1-201ENST00000279247 IGLV1-36A0A0B4J1U3 117 aa16.08■□□□□ 0.16
CAPN1-201ENST00000279247 NOTOA8MTQ0 251 aa16.08■□□□□ 0.16
CAPN1-201ENST00000279247 ABHD16AO95870 558 aa16.08■□□□□ 0.16
CAPN1-201ENST00000279247 ADRB1P08588 477 aa16.08■□□□□ 0.16
CAPN1-201ENST00000279247 PRSS45Q7RTY3 260 aa16.08■□□□□ 0.16
CAPN1-201ENST00000279247 MFSD8Q8NHS3 518 aa16.08■□□□□ 0.16
CAPN1-201ENST00000279247 UBASH3BQ8TF42 649 aa16.08■□□□□ 0.16
CAPN1-201ENST00000279247 TMEM106AQ96A25 262 aa16.08■□□□□ 0.16
CAPN1-201ENST00000279247 ZNF775Q96BV0 537 aaPredicted RBP16.08■□□□□ 0.16
CAPN1-201ENST00000279247 MAP6Q96JE9 813 aa16.08■□□□□ 0.16
CAPN1-201ENST00000279247 HPF1Q9NWY4 346 aa16.08■□□□□ 0.16
CAPN1-201ENST00000279247 NLKQ9UBE8 527 aa16.08■□□□□ 0.16
CAPN1-201ENST00000279247 POU2F3Q9UKI9 436 aa16.08■□□□□ 0.16
CAPN1-201ENST00000279247 ZNF292O60281 2723 aa16.08■□□□□ 0.16
CAPN1-201ENST00000279247 FAM47E-STBD1D6RA91 191 aa16.08■□□□□ 0.16
CAPN1-201ENST00000279247 SLC19A2O60779 497 aa16.08■□□□□ 0.16
CAPN1-201ENST00000279247 PNPP00491 289 aa16.08■□□□□ 0.16
CAPN1-201ENST00000279247 ZNF823P16415 610 aa16.08■□□□□ 0.16
CAPN1-201ENST00000279247 CFL1P23528 166 aaKnown RBP16.08■□□□□ 0.16
CAPN1-201ENST00000279247 SRP9P49458 86 aaKnown RBP16.08■□□□□ 0.16
CAPN1-201ENST00000279247 WDR38Q5JTN6 314 aa16.08■□□□□ 0.16
CAPN1-201ENST00000279247 RSBN1Q5VWQ0 802 aaPredicted RBP16.08■□□□□ 0.16
CAPN1-201ENST00000279247 PRSS35Q8N3Z0 413 aa16.08■□□□□ 0.16
CAPN1-201ENST00000279247 ACOT12Q8WYK0 555 aa16.08■□□□□ 0.16
CAPN1-201ENST00000279247 ABHD1Q96SE0 405 aa16.08■□□□□ 0.16
CAPN1-201ENST00000279247 ABHD6Q9BV23 337 aa16.08■□□□□ 0.16
CAPN1-201ENST00000279247 SLC22A4Q9H015 551 aa16.08■□□□□ 0.16
CAPN1-201ENST00000279247 H0YC42 278 aa16.07■□□□□ 0.16
CAPN1-201ENST00000279247 ONECUT2O95948 504 aa16.07■□□□□ 0.16
CAPN1-201ENST00000279247 CD3GP09693 182 aa16.07■□□□□ 0.16
CAPN1-201ENST00000279247 ACP1P24666 158 aa16.07■□□□□ 0.16
CAPN1-201ENST00000279247 SSR4P51571 173 aa16.07■□□□□ 0.16
CAPN1-201ENST00000279247 SLC18B1Q6NT16 456 aa16.07■□□□□ 0.16
CAPN1-201ENST00000279247 LRFN4Q6PJG9 635 aa16.07■□□□□ 0.16
CAPN1-201ENST00000279247 PAMR1Q6UXH9 720 aa16.07■□□□□ 0.16
CAPN1-201ENST00000279247 LRRC28Q86X40 367 aaPredicted RBP16.07■□□□□ 0.16
CAPN1-201ENST00000279247 MRGPRX4Q96LA9 322 aa16.07■□□□□ 0.16
CAPN1-201ENST00000279247 TMEM14AQ9Y6G1 99 aa16.07■□□□□ 0.16
CAPN1-201ENST00000279247 KIR2DL3P43628 341 aa16.07■□□□□ 0.16
CAPN1-201ENST00000279247 CAPZA2P47755 286 aa16.07■□□□□ 0.16
CAPN1-201ENST00000279247 DNASE1L1P49184 302 aa16.07■□□□□ 0.16
CAPN1-201ENST00000279247 SUMO3P55854 103 aaPredicted RBP16.07■□□□□ 0.16
CAPN1-201ENST00000279247 C3orf33Q6P1S2 294 aa16.07■□□□□ 0.16
CAPN1-201ENST00000279247 DHRS13Q6UX07 377 aa16.07■□□□□ 0.16
CAPN1-201ENST00000279247 IL17RDQ8NFM7 739 aa16.07■□□□□ 0.16
CAPN1-201ENST00000279247 ASB10Q8WXI3 467 aa16.07■□□□□ 0.16
CAPN1-201ENST00000279247 COMMD4Q9H0A8 199 aa16.07■□□□□ 0.16
CAPN1-201ENST00000279247 PCDHGB2Q9Y5G2 931 aa16.07■□□□□ 0.16
CAPN1-201ENST00000279247 LOC102723996A0A087X1L8 192 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms