RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 OR4K5Q8NGD3 323 aa12.45□□□□□ -0.42
HMGN3-201ENST00000275036 OR13C2Q8NGS9 318 aa12.45□□□□□ -0.42
HMGN3-201ENST00000275036 OR51A7Q8NH64 312 aa12.45□□□□□ -0.42
HMGN3-201ENST00000275036 SLC7A13Q8TCU3 470 aa12.45□□□□□ -0.42
HMGN3-201ENST00000275036 C7orf34Q96L11 122 aa12.45□□□□□ -0.42
HMGN3-201ENST00000275036 TNFRSF13CQ96RJ3 184 aa12.45□□□□□ -0.42
HMGN3-201ENST00000275036 KCNK17Q96T54 332 aa12.45□□□□□ -0.42
HMGN3-201ENST00000275036 DOK1Q99704 481 aa12.45□□□□□ -0.42
HMGN3-201ENST00000275036 DENND2DQ9H6A0 471 aaPredicted RBP12.45□□□□□ -0.42
HMGN3-201ENST00000275036 NMNAT1Q9HAN9 279 aaPredicted RBP12.45□□□□□ -0.42
HMGN3-201ENST00000275036 NDUFAF4Q9P032 175 aa12.45□□□□□ -0.42
HMGN3-201ENST00000275036 ZNF346Q9UL40 294 aaKnown RBP12.45□□□□□ -0.42
HMGN3-201ENST00000275036 ARL2BPQ9Y2Y0 163 aa12.45□□□□□ -0.42
HMGN3-201ENST00000275036 UGT2A1Q9Y4X1 527 aa12.45□□□□□ -0.42
HMGN3-201ENST00000275036 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.44□□□□□ -0.423e-6■□□□□ 10.7
HMGN3-201ENST00000275036 HTR3EA5X5Y0 456 aa12.44□□□□□ -0.42
HMGN3-201ENST00000275036 EFCAB9A8MZ26 197 aa12.44□□□□□ -0.42
HMGN3-201ENST00000275036 hCG_2039718K7EN88 272 aa12.44□□□□□ -0.42
HMGN3-201ENST00000275036 DIRAS1O95057 198 aa12.44□□□□□ -0.42
HMGN3-201ENST00000275036 IGHMP01871 453 aa12.44□□□□□ -0.42
HMGN3-201ENST00000275036 SAGP10523 405 aaPredicted RBP12.44□□□□□ -0.42
HMGN3-201ENST00000275036 TCN1P20061 433 aaPredicted RBP12.44□□□□□ -0.42
HMGN3-201ENST00000275036 NPR2P20594 1047 aa12.44□□□□□ -0.42
HMGN3-201ENST00000275036 CDAP32320 146 aa12.44□□□□□ -0.42
HMGN3-201ENST00000275036 MSX2P35548 267 aaPredicted RBP12.44□□□□□ -0.42
HMGN3-201ENST00000275036 GPR4P46093 362 aa12.44□□□□□ -0.42
HMGN3-201ENST00000275036 CTXN1P60606 82 aa12.44□□□□□ -0.42
HMGN3-201ENST00000275036 RPL27P61353 136 aaKnown RBP12.44□□□□□ -0.42
HMGN3-201ENST00000275036 VLDLRP98155 873 aa12.44□□□□□ -0.42
HMGN3-201ENST00000275036 TMEM249Q2WGJ8 235 aa12.44□□□□□ -0.42
HMGN3-201ENST00000275036 IQCCQ4KMZ1 466 aa12.44□□□□□ -0.42
HMGN3-201ENST00000275036 ZNF730Q6ZMV8 503 aa12.44□□□□□ -0.42
HMGN3-201ENST00000275036 MBOAT2Q6ZWT7 520 aa12.44□□□□□ -0.42
HMGN3-201ENST00000275036 CDK20Q8IZL9 346 aa12.44□□□□□ -0.42
HMGN3-201ENST00000275036 RNF113BQ8IZP6 322 aaKnown RBP12.44□□□□□ -0.42
HMGN3-201ENST00000275036 ZCCHC24Q8N2G6 241 aaKnown RBP12.44□□□□□ -0.42
HMGN3-201ENST00000275036 SVOPLQ8N434 492 aa12.44□□□□□ -0.42
HMGN3-201ENST00000275036 PAQR4Q8N4S7 273 aaPredicted RBP12.44□□□□□ -0.42
HMGN3-201ENST00000275036 ZNF519Q8TB69 540 aa12.44□□□□□ -0.42
HMGN3-201ENST00000275036 FAM168AQ92567 244 aa12.44□□□□□ -0.42
HMGN3-201ENST00000275036 NABP1Q96AH0 204 aa12.44□□□□□ -0.42
HMGN3-201ENST00000275036 TSPAN32Q96QS1 320 aa12.44□□□□□ -0.42
HMGN3-201ENST00000275036 MDFIQ99750 246 aa12.44□□□□□ -0.42
HMGN3-201ENST00000275036 VRK1Q99986 396 aaPredicted RBP12.44□□□□□ -0.42
HMGN3-201ENST00000275036 CD300AQ9UGN4 299 aa12.44□□□□□ -0.42
HMGN3-201ENST00000275036 TAGLN3Q9UI15 199 aa12.44□□□□□ -0.42
HMGN3-201ENST00000275036 RPS6KA6Q9UK32 745 aa12.44□□□□□ -0.42
HMGN3-201ENST00000275036 VWC2LB2RUY7 222 aa12.43□□□□□ -0.42
HMGN3-201ENST00000275036 SEMG1P04279 462 aa12.43□□□□□ -0.42
HMGN3-201ENST00000275036 SERPINA5P05154 406 aa12.43□□□□□ -0.42
HMGN3-201ENST00000275036 MMP7P09237 267 aaPredicted RBP12.43□□□□□ -0.42
HMGN3-201ENST00000275036 HSD17B1P14061 328 aa12.43□□□□□ -0.42
HMGN3-201ENST00000275036 PPOXP50336 477 aa12.43□□□□□ -0.42
HMGN3-201ENST00000275036 ZNF84P51523 738 aa12.43□□□□□ -0.42
HMGN3-201ENST00000275036 DSCR9P59020 149 aa12.43□□□□□ -0.42
HMGN3-201ENST00000275036 LOXL1Q08397 574 aaPredicted RBP12.43□□□□□ -0.42
HMGN3-201ENST00000275036 PODNL1Q6PEZ8 512 aa12.43□□□□□ -0.42
HMGN3-201ENST00000275036 SLC25A47Q6Q0C1 308 aa12.43□□□□□ -0.42
HMGN3-201ENST00000275036 TMPRSS11FQ6ZWK6 438 aa12.43□□□□□ -0.42
HMGN3-201ENST00000275036 HDDC2Q7Z4H3 204 aa12.43□□□□□ -0.42
HMGN3-201ENST00000275036 OAFQ86UD1 273 aa12.43□□□□□ -0.42
HMGN3-201ENST00000275036 PGAM4Q8N0Y7 254 aa12.43□□□□□ -0.42
HMGN3-201ENST00000275036 LRRC18Q8N456 261 aa12.43□□□□□ -0.42
HMGN3-201ENST00000275036 NSMAFQ92636 917 aa12.43□□□□□ -0.42
HMGN3-201ENST00000275036 LRRC37BQ96QE4 947 aa12.43□□□□□ -0.42
HMGN3-201ENST00000275036 MRPL37Q9BZE1 423 aaKnown RBP12.43□□□□□ -0.42
HMGN3-201ENST00000275036 ANKRD19PQ9H560 264 aa12.43□□□□□ -0.42
HMGN3-201ENST00000275036 GORASP2Q9H8Y8 452 aa12.43□□□□□ -0.42
HMGN3-201ENST00000275036 YAE1D1Q9NRH1 226 aa12.43□□□□□ -0.42
HMGN3-201ENST00000275036 V9GYQ6 96 aa12.43□□□□□ -0.42
HMGN3-201ENST00000275036 FBN1P35555 2871 aaKnown RBP12.43□□□□□ -0.42
HMGN3-201ENST00000275036 TRBV4-1A0A0J9YWV2 114 aa12.42□□□□□ -0.42
HMGN3-201ENST00000275036 A0A1W2PRQ8 180 aa12.42□□□□□ -0.42
HMGN3-201ENST00000275036 SH3PXD2BA1X283 911 aa12.42□□□□□ -0.42
HMGN3-201ENST00000275036 FARS2O95363 451 aaKnown RBP12.42□□□□□ -0.42
HMGN3-201ENST00000275036 TP53P04637 393 aaPredicted RBP12.42□□□□□ -0.42
HMGN3-201ENST00000275036 H1F0P07305 194 aaKnown RBP12.42□□□□□ -0.42
HMGN3-201ENST00000275036 CCL2P13500 99 aa12.42□□□□□ -0.42
HMGN3-201ENST00000275036 SLC25A16P16260 332 aa12.42□□□□□ -0.42
HMGN3-201ENST00000275036 RHCEP18577 417 aa12.42□□□□□ -0.42
HMGN3-201ENST00000275036 SLC9A3P48764 834 aa12.42□□□□□ -0.42
HMGN3-201ENST00000275036 MRPS34P82930 218 aaKnown RBP12.42□□□□□ -0.42
HMGN3-201ENST00000275036 CD47Q08722 323 aa12.42□□□□□ -0.42
HMGN3-201ENST00000275036 DGCR6Q14129 220 aa12.42□□□□□ -0.42
HMGN3-201ENST00000275036 SEC23BQ15437 767 aa12.42□□□□□ -0.42
HMGN3-201ENST00000275036 TAF11Q15544 211 aa12.42□□□□□ -0.42
HMGN3-201ENST00000275036 NRN1LQ496H8 165 aa12.42□□□□□ -0.42
HMGN3-201ENST00000275036 C6orf52Q5T4I8 152 aa12.42□□□□□ -0.42
HMGN3-201ENST00000275036 SLC16A14Q7RTX9 510 aa12.42□□□□□ -0.42
HMGN3-201ENST00000275036 LRP11Q86VZ4 500 aa12.42□□□□□ -0.42
HMGN3-201ENST00000275036 CYP4Z1Q86W10 505 aa12.42□□□□□ -0.42
HMGN3-201ENST00000275036 MRPL24Q96A35 216 aaKnown RBP12.42□□□□□ -0.42
HMGN3-201ENST00000275036 FAM46AQ96IP4 442 aaKnown RBP12.42□□□□□ -0.42
HMGN3-201ENST00000275036 DHRS1Q96LJ7 313 aa12.42□□□□□ -0.42
HMGN3-201ENST00000275036 CDRT15Q96T59 188 aa12.42□□□□□ -0.42
HMGN3-201ENST00000275036 FUZQ9BT04 418 aa12.42□□□□□ -0.42
HMGN3-201ENST00000275036 ALG12Q9BV10 488 aa12.42□□□□□ -0.42
HMGN3-201ENST00000275036 SMURF2Q9HAU4 748 aa12.42□□□□□ -0.42
HMGN3-201ENST00000275036 MYEF2Q9P2K5 600 aaKnown RBP12.42□□□□□ -0.42
HMGN3-201ENST00000275036 STX18Q9P2W9 335 aaKnown RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms