RNA–Protein interactions for RNA: ENST00000274030.10

USP53-201, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP53, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-201ENST00000274030 SDF2Q99470 211 aa10.53□□□□□ -0.72
USP53-201ENST00000274030 SEMA4CQ9C0C4 833 aa10.53□□□□□ -0.72
USP53-201ENST00000274030 OR11A1Q9GZK7 315 aa10.53□□□□□ -0.72
USP53-201ENST00000274030 NPFFR2Q9Y5X5 522 aa10.53□□□□□ -0.72
USP53-201ENST00000274030 HSBP1L1C9JCN9 74 aa10.52□□□□□ -0.72
USP53-201ENST00000274030 CLN5O75503 358 aa10.52□□□□□ -0.72
USP53-201ENST00000274030 GLCEO94923 617 aa10.52□□□□□ -0.72
USP53-201ENST00000274030 CBR1P16152 277 aa10.52□□□□□ -0.72
USP53-201ENST00000274030 MFGE8Q08431 387 aaPredicted RBP10.52□□□□□ -0.72
USP53-201ENST00000274030 PMPCAQ10713 525 aa10.52□□□□□ -0.72
USP53-201ENST00000274030 FXNQ16595 210 aa10.52□□□□□ -0.72
USP53-201ENST00000274030 LACC1Q8IV20 430 aa10.52□□□□□ -0.72
USP53-201ENST00000274030 UPRTQ96BW1 309 aa10.52□□□□□ -0.72
USP53-201ENST00000274030 KCNJ15Q99712 375 aa10.52□□□□□ -0.72
USP53-201ENST00000274030 C1QTNF3Q9BXJ4 246 aa10.52□□□□□ -0.72
USP53-201ENST00000274030 TINAGL1Q9GZM7 467 aaPredicted RBP10.52□□□□□ -0.72
USP53-201ENST00000274030 NGBQ9NPG2 151 aa10.52□□□□□ -0.72
USP53-201ENST00000274030 DECR2Q9NUI1 292 aa10.52□□□□□ -0.72
USP53-201ENST00000274030 MYOTQ9UBF9 498 aa10.52□□□□□ -0.72
USP53-201ENST00000274030 HRH3Q9Y5N1 445 aa10.52□□□□□ -0.72
USP53-201ENST00000274030 OR2W5A6NFC9 320 aa10.52□□□□□ -0.72
USP53-201ENST00000274030 SLC16A6O15403 523 aa10.52□□□□□ -0.72
USP53-201ENST00000274030 ZIC2O95409 532 aaPredicted RBP10.52□□□□□ -0.72
USP53-201ENST00000274030 MYF5P13349 255 aa10.52□□□□□ -0.72
USP53-201ENST00000274030 EIF1P41567 113 aaKnown RBP10.52□□□□□ -0.72
USP53-201ENST00000274030 HTR4Q13639 388 aa10.52□□□□□ -0.72
USP53-201ENST00000274030 TESK1Q15569 626 aa10.52□□□□□ -0.72
USP53-201ENST00000274030 XKR7Q5GH72 579 aa10.52□□□□□ -0.72
USP53-201ENST00000274030 OR4A16Q8NH70 328 aa10.52□□□□□ -0.72
USP53-201ENST00000274030 TEAD3Q99594 435 aa10.52□□□□□ -0.72
USP53-201ENST00000274030 DEFB127Q9H1M4 99 aa10.52□□□□□ -0.72
USP53-201ENST00000274030 KLRC4-KLRK1H3BQV0 150 aa10.52□□□□□ -0.73
USP53-201ENST00000274030 HOXC11O43248 304 aaPredicted RBP10.52□□□□□ -0.73
USP53-201ENST00000274030 IGHEP01854 428 aa10.52□□□□□ -0.73
USP53-201ENST00000274030 ANXA7P20073 488 aaKnown RBP10.52□□□□□ -0.73
USP53-201ENST00000274030 ETV1P50549 477 aa10.52□□□□□ -0.73
USP53-201ENST00000274030 MAP2K6P52564 334 aa10.52□□□□□ -0.73
USP53-201ENST00000274030 HNRNPFP52597 415 aaKnown RBP10.52□□□□□ -0.73
USP53-201ENST00000274030 PPP2CBP62714 309 aa10.52□□□□□ -0.73
USP53-201ENST00000274030 PPP2CAP67775 309 aa10.52□□□□□ -0.73
USP53-201ENST00000274030 OTUD1Q5VV17 481 aaPredicted RBP10.52□□□□□ -0.73
USP53-201ENST00000274030 LINC01465Q8N7H1 131 aa10.52□□□□□ -0.73
USP53-201ENST00000274030 CLDN22Q8N7P3 220 aa10.52□□□□□ -0.73
USP53-201ENST00000274030 SLC35B4Q969S0 331 aa10.52□□□□□ -0.73
USP53-201ENST00000274030 ABHD6Q9BV23 337 aa10.52□□□□□ -0.73
USP53-201ENST00000274030 TMEM221A6NGB7 291 aa10.52□□□□□ -0.73
USP53-201ENST00000274030 OR6C65A6NJZ3 312 aa10.52□□□□□ -0.73
USP53-201ENST00000274030 CCSO14618 274 aa10.52□□□□□ -0.73
USP53-201ENST00000274030 CPT2P23786 658 aa10.52□□□□□ -0.73
USP53-201ENST00000274030 RPS27AP62979 156 aaKnown RBP10.52□□□□□ -0.73
USP53-201ENST00000274030 UBA52P62987 128 aaKnown RBP10.52□□□□□ -0.73
USP53-201ENST00000274030 RIPPLY1Q0D2K3 151 aa10.52□□□□□ -0.73
USP53-201ENST00000274030 SYT14P1Q58G82 188 aa10.52□□□□□ -0.73
USP53-201ENST00000274030 BRICD5Q6PL45 260 aa10.52□□□□□ -0.73
USP53-201ENST00000274030 TMEM99Q8N816 258 aa10.52□□□□□ -0.73
USP53-201ENST00000274030 TSLPQ969D9 159 aa10.52□□□□□ -0.73
USP53-201ENST00000274030 ANKRD9Q96BM1 317 aaPredicted RBP10.52□□□□□ -0.73
USP53-201ENST00000274030 SPACA5Q96QH8 159 aa10.52□□□□□ -0.73
USP53-201ENST00000274030 TNFRSF12AQ9NP84 129 aa10.52□□□□□ -0.73
USP53-201ENST00000274030 IDSB3KWA1 339 aa10.52□□□□□ -0.73
USP53-201ENST00000274030 UBE2KP61086 200 aa10.52□□□□□ -0.73
USP53-201ENST00000274030 DUSP2Q05923 314 aa10.52□□□□□ -0.73
USP53-201ENST00000274030 IAH1Q2TAA2 248 aaPredicted RBP10.52□□□□□ -0.73
USP53-201ENST00000274030 LIPNQ5VXI9 398 aa10.52□□□□□ -0.73
USP53-201ENST00000274030 ACSM5Q6NUN0 579 aa10.52□□□□□ -0.73
USP53-201ENST00000274030 RDH10Q8IZV5 341 aa10.52□□□□□ -0.73
USP53-201ENST00000274030 ZFP82Q8N141 532 aa10.52□□□□□ -0.73
USP53-201ENST00000274030 ZNF687Q8N1G0 1237 aa10.52□□□□□ -0.73
USP53-201ENST00000274030 TMEM178AQ8NBL3 297 aa10.52□□□□□ -0.73
USP53-201ENST00000274030 OR5H6Q8NGV6 325 aa10.52□□□□□ -0.73
USP53-201ENST00000274030 PARP12Q9H0J9 701 aaKnown RBP10.52□□□□□ -0.73
USP53-201ENST00000274030 GPR173Q9NS66 373 aa10.52□□□□□ -0.73
USP53-201ENST00000274030 ACER3Q9NUN7 267 aa10.52□□□□□ -0.73
USP53-201ENST00000274030 UFSP2Q9NUQ7 469 aa10.52□□□□□ -0.73
USP53-201ENST00000274030 KCND3Q9UK17 655 aa10.52□□□□□ -0.73
USP53-201ENST00000274030 UGT2A1Q9Y4X1 527 aa10.52□□□□□ -0.73
USP53-201ENST00000274030 SULT1B1O43704 296 aa10.51□□□□□ -0.73
USP53-201ENST00000274030 KCNK2O95069 426 aa10.51□□□□□ -0.73
USP53-201ENST00000274030 SCAF4O95104 1147 aaKnown RBP10.51□□□□□ -0.73
USP53-201ENST00000274030 SNAPINO95295 136 aa10.51□□□□□ -0.73
USP53-201ENST00000274030 LGI1O95970 557 aa10.51□□□□□ -0.73
USP53-201ENST00000274030 GALEQ14376 348 aa10.51□□□□□ -0.73
USP53-201ENST00000274030 DMRTC1Q5HYR2 192 aa10.51□□□□□ -0.73
USP53-201ENST00000274030 CLVS2Q5SYC1 327 aa10.51□□□□□ -0.73
USP53-201ENST00000274030 GRINAQ7Z429 371 aa10.51□□□□□ -0.73
USP53-201ENST00000274030 GJC3Q8NFK1 279 aa10.51□□□□□ -0.73
USP53-201ENST00000274030 TRABD2BA6NFA1 517 aa10.51□□□□□ -0.73
USP53-201ENST00000274030 RNF212BA8MTL3 300 aa10.51□□□□□ -0.73
USP53-201ENST00000274030 PCSK6P29122 969 aa10.51□□□□□ -0.73
USP53-201ENST00000274030 RFC3P40938 356 aa10.51□□□□□ -0.73
USP53-201ENST00000274030 HES1Q14469 280 aa10.51□□□□□ -0.73
USP53-201ENST00000274030 ACTBL2Q562R1 376 aa10.51□□□□□ -0.73
USP53-201ENST00000274030 MKRN2Q9H000 416 aaKnown RBP10.51□□□□□ -0.73
USP53-201ENST00000274030 ZNF732B4DXR9 585 aa10.51□□□□□ -0.73
USP53-201ENST00000274030 STMND1H3BQB6 276 aa10.51□□□□□ -0.73
USP53-201ENST00000274030 IMPA2O14732 288 aa10.51□□□□□ -0.73
USP53-201ENST00000274030 ELAVL1Q15717 326 aaKnown RBP10.51□□□□□ -0.73
USP53-201ENST00000274030 LOC100289279A0A1B0GTE1 492 aa10.51□□□□□ -0.73
USP53-201ENST00000274030 GFYI3L273 518 aa10.51□□□□□ -0.73
USP53-201ENST00000274030 NID1P14543 1247 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms