RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 C1orf185Q5T7R7 199 aa21.91■■□□□ 1.1
SSBP4-201ENST00000270061 RTL6Q6ICC9 239 aa21.91■■□□□ 1.1
SSBP4-201ENST00000270061 H1FNTQ75WM6 255 aaPredicted RBP21.91■■□□□ 1.1
SSBP4-201ENST00000270061 KLHL36Q8N4N3 616 aa21.91■■□□□ 1.1
SSBP4-201ENST00000270061 POMGNT2Q8NAT1 580 aa21.91■■□□□ 1.1
SSBP4-201ENST00000270061 DCUN1D5Q9BTE7 237 aa21.91■■□□□ 1.1
SSBP4-201ENST00000270061 TXNIPQ9H3M7 391 aa21.91■■□□□ 1.1
SSBP4-201ENST00000270061 FANCFQ9NPI8 374 aa21.91■■□□□ 1.1
SSBP4-201ENST00000270061 ASB6Q9NWX5 421 aa21.91■■□□□ 1.1
SSBP4-201ENST00000270061 CAB39Q9Y376 341 aaPredicted RBP21.91■■□□□ 1.1
SSBP4-201ENST00000270061 RNF13O43567 381 aa21.9■■□□□ 1.1
SSBP4-201ENST00000270061 DPP4P27487 766 aa21.9■■□□□ 1.1
SSBP4-201ENST00000270061 CHRNB4P30926 498 aa21.9■■□□□ 1.1
SSBP4-201ENST00000270061 OR7A5Q15622 319 aa21.9■■□□□ 1.1
SSBP4-201ENST00000270061 TIMM50Q3ZCQ8 353 aa21.9■■□□□ 1.1
SSBP4-201ENST00000270061 GLYR1Q49A26 553 aaPredicted RBP21.9■■□□□ 1.1
SSBP4-201ENST00000270061 MESTQ5EB52 335 aa21.9■■□□□ 1.1
SSBP4-201ENST00000270061 OR2G6Q5TZ20 316 aa21.9■■□□□ 1.1
SSBP4-201ENST00000270061 YRDCQ86U90 279 aaKnown RBP21.9■■□□□ 1.1
SSBP4-201ENST00000270061 ARIH2OSQ8N7S6 290 aa21.9■■□□□ 1.1
SSBP4-201ENST00000270061 MARVELD3Q96A59 401 aa21.9■■□□□ 1.1
SSBP4-201ENST00000270061 DNAJA3Q96EY1 480 aa21.9■■□□□ 1.1
SSBP4-201ENST00000270061 TIMP4Q99727 224 aa21.9■■□□□ 1.1
SSBP4-201ENST00000270061 MOKQ9UQ07 419 aa21.9■■□□□ 1.1
SSBP4-201ENST00000270061 NPIPB13A6NJU9 1138 aa21.89■■□□□ 1.1
SSBP4-201ENST00000270061 C12orf71A8MTZ7 269 aa21.89■■□□□ 1.1
SSBP4-201ENST00000270061 NPIPB4C9JG80 1138 aa21.89■■□□□ 1.1
SSBP4-201ENST00000270061 GLI4P10075 376 aa21.89■■□□□ 1.1
SSBP4-201ENST00000270061 TFPIP10646 304 aa21.89■■□□□ 1.1
SSBP4-201ENST00000270061 CPEP16870 476 aa21.89■■□□□ 1.1
SSBP4-201ENST00000270061 PTGER4P35408 488 aa21.89■■□□□ 1.1
SSBP4-201ENST00000270061 RPL27P61353 136 aaKnown RBP21.89■■□□□ 1.1
SSBP4-201ENST00000270061 VASNQ6EMK4 673 aa21.89■■□□□ 1.1
SSBP4-201ENST00000270061 ADCK1Q86TW2 530 aa21.89■■□□□ 1.1
SSBP4-201ENST00000270061 ZPLD1Q8TCW7 415 aa21.89■■□□□ 1.1
SSBP4-201ENST00000270061 DTNBP1Q96EV8 351 aa21.89■■□□□ 1.1
SSBP4-201ENST00000270061 B3GALT5Q9Y2C3 310 aa21.89■■□□□ 1.1
SSBP4-201ENST00000270061 C11orf98E9PRG8 122 aa21.89■■□□□ 1.09
SSBP4-201ENST00000270061 MS4A18H0YCH9 400 aa21.89■■□□□ 1.09
SSBP4-201ENST00000270061 AHCYL1O43865 530 aa21.89■■□□□ 1.09
SSBP4-201ENST00000270061 GLCEO94923 617 aa21.89■■□□□ 1.09
SSBP4-201ENST00000270061 BCL10O95999 233 aa21.89■■□□□ 1.09
SSBP4-201ENST00000270061 ZNF182P17025 639 aaPredicted RBP21.89■■□□□ 1.09
SSBP4-201ENST00000270061 AHCYP23526 432 aa21.89■■□□□ 1.09
SSBP4-201ENST00000270061 GTF2E2P29084 291 aaKnown RBP21.89■■□□□ 1.09
SSBP4-201ENST00000270061 ACTC1P68032 377 aa21.89■■□□□ 1.09
SSBP4-201ENST00000270061 ACTA1P68133 377 aa21.89■■□□□ 1.09
SSBP4-201ENST00000270061 TPBGQ13641 420 aa21.89■■□□□ 1.09
SSBP4-201ENST00000270061 GALEQ14376 348 aa21.89■■□□□ 1.09
SSBP4-201ENST00000270061 MS4A18Q3C1V0 323 aa21.89■■□□□ 1.09
SSBP4-201ENST00000270061 TMEM99Q8N816 258 aa21.89■■□□□ 1.09
SSBP4-201ENST00000270061 ADPRHL1Q8NDY3 354 aa21.89■■□□□ 1.09
SSBP4-201ENST00000270061 ATP6V1C2Q8NEY4 427 aa21.89■■□□□ 1.09
SSBP4-201ENST00000270061 ZNF519Q8TB69 540 aa21.89■■□□□ 1.09
SSBP4-201ENST00000270061 SMPDL3BQ92485 455 aa21.89■■□□□ 1.09
SSBP4-201ENST00000270061 RPL3LQ92901 407 aaKnown RBP21.89■■□□□ 1.09
SSBP4-201ENST00000270061 HDGFL3Q9Y3E1 203 aa21.89■■□□□ 1.09
SSBP4-201ENST00000270061 H3BML4 177 aa21.88■■□□□ 1.09
SSBP4-201ENST00000270061 ZIC3O60481 467 aa21.88■■□□□ 1.09
SSBP4-201ENST00000270061 ZNF17P17021 662 aa21.88■■□□□ 1.09
SSBP4-201ENST00000270061 VBP1P61758 197 aa21.88■■□□□ 1.09
SSBP4-201ENST00000270061 PUDPQ08623 228 aa21.88■■□□□ 1.09
SSBP4-201ENST00000270061 MYBPHQ13203 477 aa21.88■■□□□ 1.09
SSBP4-201ENST00000270061 ACKR1Q16570 336 aa21.88■■□□□ 1.09
SSBP4-201ENST00000270061 TMPRSS11AQ6ZMR5 421 aa21.88■■□□□ 1.09
SSBP4-201ENST00000270061 PM20D2Q8IYS1 436 aa21.88■■□□□ 1.09
SSBP4-201ENST00000270061 OR14L1PQ8NHC6 308 aa21.88■■□□□ 1.09
SSBP4-201ENST00000270061 LILRB4Q8NHJ6 448 aa21.88■■□□□ 1.09
SSBP4-201ENST00000270061 GATAD2BQ8WXI9 593 aa21.88■■□□□ 1.09
SSBP4-201ENST00000270061 ABTB1Q969K4 478 aaPredicted RBP21.88■■□□□ 1.09
SSBP4-201ENST00000270061 NDUFB11Q9NX14 153 aa21.88■■□□□ 1.09
SSBP4-201ENST00000270061 LRBAP50851 2863 aa21.88■■□□□ 1.09
SSBP4-201ENST00000270061 APCP25054 2843 aa21.88■■□□□ 1.09
SSBP4-201ENST00000270061 DAPL1A0PJW8 107 aa21.87■■□□□ 1.09
SSBP4-201ENST00000270061 AHRRA9YTQ3 701 aa21.87■■□□□ 1.09
SSBP4-201ENST00000270061 RENP00797 406 aa21.87■■□□□ 1.09
SSBP4-201ENST00000270061 UGT2B10P36537 528 aa21.87■■□□□ 1.09
SSBP4-201ENST00000270061 LINC01590Q5TEZ4 76 aa21.87■■□□□ 1.09
SSBP4-201ENST00000270061 ZNF322Q6U7Q0 402 aaPredicted RBP21.87■■□□□ 1.09
SSBP4-201ENST00000270061 GDPGP1Q6ZNW5 385 aa21.87■■□□□ 1.09
SSBP4-201ENST00000270061 PHC2Q8IXK0 858 aa21.87■■□□□ 1.09
SSBP4-201ENST00000270061 ZMYND19Q96E35 227 aaPredicted RBP21.87■■□□□ 1.09
SSBP4-201ENST00000270061 DOCK7Q96N67 2140 aa21.87■■□□□ 1.09
SSBP4-201ENST00000270061 OR2B2Q9GZK3 357 aa21.87■■□□□ 1.09
SSBP4-201ENST00000270061 PRDM14Q9GZV8 571 aa21.87■■□□□ 1.09
SSBP4-201ENST00000270061 RPRD1BQ9NQG5 326 aaKnown RBP21.87■■□□□ 1.09
SSBP4-201ENST00000270061 TRAPPC4Q9Y296 219 aa21.87■■□□□ 1.09
SSBP4-201ENST00000270061 MRPS18CQ9Y3D5 142 aaKnown RBP21.87■■□□□ 1.09
SSBP4-201ENST00000270061 NOX1Q9Y5S8 564 aa21.87■■□□□ 1.09
SSBP4-201ENST00000270061 A0A1W2PRG6 482 aa21.87■■□□□ 1.09
SSBP4-201ENST00000270061 OR2T7P0C7T2 308 aa21.87■■□□□ 1.09
SSBP4-201ENST00000270061 SRD5A2P31213 254 aa21.87■■□□□ 1.09
SSBP4-201ENST00000270061 NCS1P62166 190 aa21.87■■□□□ 1.09
SSBP4-201ENST00000270061 LSM3P62310 102 aaKnown RBP21.87■■□□□ 1.09
SSBP4-201ENST00000270061 BDH1Q02338 343 aa21.87■■□□□ 1.09
SSBP4-201ENST00000270061 DBPQ10586 325 aaPredicted RBP21.87■■□□□ 1.09
SSBP4-201ENST00000270061 ZNF239Q16600 458 aaKnown RBP21.87■■□□□ 1.09
SSBP4-201ENST00000270061 OR10H4Q8NGA5 316 aa21.87■■□□□ 1.09
SSBP4-201ENST00000270061 OR5M1Q8NGP8 315 aa21.87■■□□□ 1.09
SSBP4-201ENST00000270061 OR2T27Q8NH04 317 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms