RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 SUCLG1P53597 346 aaKnown RBP14.58□□□□□ -0.07
TPM1-201ENST00000267996 ARG2P78540 354 aa14.58□□□□□ -0.07
TPM1-201ENST00000267996 FMODQ06828 376 aa14.58□□□□□ -0.07
TPM1-201ENST00000267996 HIST3H3Q16695 136 aa14.58□□□□□ -0.07
TPM1-201ENST00000267996 THEM4Q5T1C6 240 aa14.58□□□□□ -0.07
TPM1-201ENST00000267996 HBMQ6B0K9 141 aa14.58□□□□□ -0.07
TPM1-201ENST00000267996 PLEKHG7Q6ZR37 379 aa14.58□□□□□ -0.07
TPM1-201ENST00000267996 CREB3L2Q70SY1 520 aa14.58□□□□□ -0.07
TPM1-201ENST00000267996 DPY19L4Q7Z388 723 aa14.58□□□□□ -0.07
TPM1-201ENST00000267996 NOXO1Q8NFA2 376 aa14.58□□□□□ -0.07
TPM1-201ENST00000267996 SLC26A10Q8NG04 563 aa14.58□□□□□ -0.07
TPM1-201ENST00000267996 OR6N2Q8NGY6 317 aa14.58□□□□□ -0.07
TPM1-201ENST00000267996 OTOSQ8NHW6 89 aa14.58□□□□□ -0.07
TPM1-201ENST00000267996 RPS4Y2Q8TD47 263 aa14.58□□□□□ -0.07
TPM1-201ENST00000267996 RNF166Q96A37 237 aaPredicted RBP14.58□□□□□ -0.07
TPM1-201ENST00000267996 RBP7Q96R05 134 aa14.58□□□□□ -0.07
TPM1-201ENST00000267996 CCDC86Q9H6F5 360 aaKnown RBP14.58□□□□□ -0.07
TPM1-201ENST00000267996 EIF1AYO14602 144 aaKnown RBP14.58□□□□□ -0.08
TPM1-201ENST00000267996 PHYHO14832 338 aa14.58□□□□□ -0.08
TPM1-201ENST00000267996 SMAD9O15198 467 aaKnown RBP14.58□□□□□ -0.08
TPM1-201ENST00000267996 SULT1C4O75897 302 aa14.58□□□□□ -0.08
TPM1-201ENST00000267996 CELA3AP09093 270 aa14.58□□□□□ -0.08
TPM1-201ENST00000267996 INHBBP09529 407 aa14.58□□□□□ -0.08
TPM1-201ENST00000267996 RFC3P40938 356 aa14.58□□□□□ -0.08
TPM1-201ENST00000267996 TGM4P49221 684 aa14.58□□□□□ -0.08
TPM1-201ENST00000267996 CARD18P57730 90 aa14.58□□□□□ -0.08
TPM1-201ENST00000267996 SIRPAP78324 504 aa14.58□□□□□ -0.08
TPM1-201ENST00000267996 EGR3Q06889 387 aa14.58□□□□□ -0.08
TPM1-201ENST00000267996 SLC17A1Q14916 467 aa14.58□□□□□ -0.08
TPM1-201ENST00000267996 PCK2Q16822 640 aa14.58□□□□□ -0.08
TPM1-201ENST00000267996 CCDC58Q4VC31 144 aa14.58□□□□□ -0.08
TPM1-201ENST00000267996 ZNF766Q5HY98 468 aa14.58□□□□□ -0.08
TPM1-201ENST00000267996 TEX30Q5JUR7 227 aa14.58□□□□□ -0.08
TPM1-201ENST00000267996 FNDC8Q8TC99 324 aa14.58□□□□□ -0.08
TPM1-201ENST00000267996 PGLYRP3Q96LB9 341 aa14.58□□□□□ -0.08
TPM1-201ENST00000267996 SF3B5Q9BWJ5 86 aaKnown RBP14.58□□□□□ -0.08
TPM1-201ENST00000267996 TTTY10Q9BZA0 68 aa14.58□□□□□ -0.08
TPM1-201ENST00000267996 NXF2Q9GZY0 626 aaKnown RBP14.58□□□□□ -0.08
TPM1-201ENST00000267996 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.58□□□□□ -0.08
TPM1-201ENST00000267996 KLHL9Q9P2J3 617 aa14.58□□□□□ -0.08
TPM1-201ENST00000267996 LAMP5Q9UJQ1 280 aa14.58□□□□□ -0.08
TPM1-201ENST00000267996 GNG8Q9UK08 70 aa14.58□□□□□ -0.08
TPM1-201ENST00000267996 A3GALT2U3KPV4 340 aa14.58□□□□□ -0.08
TPM1-201ENST00000267996 IGHV3-15A0A0B4J1V0 119 aa14.57□□□□□ -0.08
TPM1-201ENST00000267996 METTL15A6NJ78 407 aa14.57□□□□□ -0.08
TPM1-201ENST00000267996 ZNF593O00488 134 aaPredicted RBP14.57□□□□□ -0.08
TPM1-201ENST00000267996 HRGP04196 525 aa14.57□□□□□ -0.08
TPM1-201ENST00000267996 ENPP1P22413 925 aa14.57□□□□□ -0.08
TPM1-201ENST00000267996 MAGEA5P43359 124 aa14.57□□□□□ -0.08
TPM1-201ENST00000267996 ENTPD1P49961 510 aa14.57□□□□□ -0.08
TPM1-201ENST00000267996 LHX2P50458 406 aa14.57□□□□□ -0.08
TPM1-201ENST00000267996 ROR2Q01974 943 aaKnown RBP14.57□□□□□ -0.08
TPM1-201ENST00000267996 PLGLB1Q02325 96 aa14.57□□□□□ -0.08
TPM1-201ENST00000267996 CAMK2DQ13557 499 aa14.57□□□□□ -0.08
TPM1-201ENST00000267996 CDK5R1Q15078 307 aa14.57□□□□□ -0.08
TPM1-201ENST00000267996 TRAM1Q15629 374 aa14.57□□□□□ -0.08
TPM1-201ENST00000267996 DEFB109BQ30KR1 87 aa14.57□□□□□ -0.08
TPM1-201ENST00000267996 C22orf42Q6IC83 251 aa14.57□□□□□ -0.08
TPM1-201ENST00000267996 SLC25A47Q6Q0C1 308 aa14.57□□□□□ -0.08
TPM1-201ENST00000267996 ARL9Q6T311 187 aa14.57□□□□□ -0.08
TPM1-201ENST00000267996 RPTNQ6XPR3 784 aa14.57□□□□□ -0.08
TPM1-201ENST00000267996 TMEM91Q6ZNR0 172 aa14.57□□□□□ -0.08
TPM1-201ENST00000267996 TMEM178AQ8NBL3 297 aa14.57□□□□□ -0.08
TPM1-201ENST00000267996 OR9K2Q8NGE7 335 aa14.57□□□□□ -0.08
TPM1-201ENST00000267996 OR10D3Q8NH80 312 aa14.57□□□□□ -0.08
TPM1-201ENST00000267996 HAVCR2Q8TDQ0 301 aa14.57□□□□□ -0.08
TPM1-201ENST00000267996 DCLRE1CQ96SD1 692 aaKnown RBP14.57□□□□□ -0.08
TPM1-201ENST00000267996 TMED9Q9BVK6 235 aa14.57□□□□□ -0.08
TPM1-201ENST00000267996 ACOXLQ9NUZ1 547 aa14.57□□□□□ -0.08
TPM1-201ENST00000267996 MRM2Q9UI43 246 aaKnown RBP14.57□□□□□ -0.08
TPM1-201ENST00000267996 KCNG2Q9UJ96 466 aa14.57□□□□□ -0.08
TPM1-201ENST00000267996 GSTK1Q9Y2Q3 226 aa14.57□□□□□ -0.08
TPM1-201ENST00000267996 GRIP1Q9Y3R0 1128 aa14.57□□□□□ -0.08
TPM1-201ENST00000267996 KCNMB2Q9Y691 235 aa14.57□□□□□ -0.08
TPM1-201ENST00000267996 ZNF726A6NNF4 738 aa14.56□□□□□ -0.08
TPM1-201ENST00000267996 FAM166BA8MTA8 275 aa14.56□□□□□ -0.08
TPM1-201ENST00000267996 GABRPO00591 440 aa14.56□□□□□ -0.08
TPM1-201ENST00000267996 UPK3AO75631 287 aa14.56□□□□□ -0.08
TPM1-201ENST00000267996 HLA-DQA2P01906 255 aa14.56□□□□□ -0.08
TPM1-201ENST00000267996 TACSTD2P09758 323 aa14.56□□□□□ -0.08
TPM1-201ENST00000267996 SDHBP21912 280 aa14.56□□□□□ -0.08
TPM1-201ENST00000267996 CLRN1P58418 232 aa14.56□□□□□ -0.08
TPM1-201ENST00000267996 PPIAP62937 165 aaKnown RBP14.56□□□□□ -0.08
TPM1-201ENST00000267996 MRPL28Q13084 256 aaKnown RBP14.56□□□□□ -0.08
TPM1-201ENST00000267996 MOGQ16653 247 aa14.56□□□□□ -0.08
TPM1-201ENST00000267996 RPL22L1Q6P5R6 122 aaKnown RBP14.56□□□□□ -0.08
TPM1-201ENST00000267996 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.56□□□□□ -0.08
TPM1-201ENST00000267996 GLB1L2Q8IW92 636 aa14.56□□□□□ -0.08
TPM1-201ENST00000267996 ZNF454Q8N9F8 522 aa14.56□□□□□ -0.08
TPM1-201ENST00000267996 ZIC4Q8N9L1 334 aa14.56□□□□□ -0.08
TPM1-201ENST00000267996 ASB17Q8WXJ9 295 aa14.56□□□□□ -0.08
TPM1-201ENST00000267996 KCTD7Q96MP8 289 aa14.56□□□□□ -0.08
TPM1-201ENST00000267996 FOXN4Q96NZ1 517 aa14.56□□□□□ -0.08
TPM1-201ENST00000267996 MED18Q9BUE0 208 aa14.56□□□□□ -0.08
TPM1-201ENST00000267996 CDADC1Q9BWV3 514 aa14.56□□□□□ -0.08
TPM1-201ENST00000267996 ACKR4Q9NPB9 350 aa14.56□□□□□ -0.08
TPM1-201ENST00000267996 WASF3Q9UPY6 502 aa14.56□□□□□ -0.08
TPM1-201ENST00000267996 HSPB2A8KAH6 182 aa14.55□□□□□ -0.08
TPM1-201ENST00000267996 TLX3O43711 291 aaPredicted RBP14.55□□□□□ -0.08
TPM1-201ENST00000267996 CXCL13O43927 109 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms