RNA–Protein interactions for RNA: ENST00000266880.11

CHFR-201, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 11,133 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-201ENST00000266880 FIGLAQ6QHK4 219 aa10.35□□□□□ -0.75
CHFR-201ENST00000266880 TEX261Q6UWH6 196 aa10.35□□□□□ -0.75
CHFR-201ENST00000266880 VRK2Q86Y07 508 aa10.35□□□□□ -0.75
CHFR-201ENST00000266880 KHSRPQ92945 711 aaKnown RBP eCLIP10.35□□□□□ -0.75
CHFR-201ENST00000266880 ZNF629Q9UEG4 869 aaPredicted RBP10.35□□□□□ -0.75
CHFR-201ENST00000266880 U3KQ87 197 aa10.35□□□□□ -0.75
CHFR-201ENST00000266880 XKRY2A2RUG3 117 aa10.35□□□□□ -0.75
CHFR-201ENST00000266880 ZNF98A6NK75 572 aa10.35□□□□□ -0.75
CHFR-201ENST00000266880 SCG5P05408 212 aa10.35□□□□□ -0.75
CHFR-201ENST00000266880 ACSM4P0C7M7 580 aa10.35□□□□□ -0.75
CHFR-201ENST00000266880 Q6ZTK2 550 aa10.35□□□□□ -0.75
CHFR-201ENST00000266880 ZNF573Q86YE8 665 aa10.35□□□□□ -0.75
CHFR-201ENST00000266880 CMBLQ96DG6 245 aa10.35□□□□□ -0.75
CHFR-201ENST00000266880 UBQLN4Q9NRR5 601 aa10.35□□□□□ -0.75
CHFR-201ENST00000266880 NECAP2Q9NVZ3 263 aa10.35□□□□□ -0.75
CHFR-201ENST00000266880 PCDHGA9Q9Y5G4 932 aaKnown RBP10.35□□□□□ -0.75
CHFR-201ENST00000266880 PRAMEF4O60810 478 aa10.35□□□□□ -0.75
CHFR-201ENST00000266880 USP53Q70EK8 1073 aa10.35□□□□□ -0.75
CHFR-201ENST00000266880 THNSL2Q86YJ6 484 aa10.35□□□□□ -0.75
CHFR-201ENST00000266880 KCTD12Q96CX2 325 aaKnown RBP10.35□□□□□ -0.75
CHFR-201ENST00000266880 SORT1Q99523 831 aa10.35□□□□□ -0.75
CHFR-201ENST00000266880 OR52D1Q9H346 318 aa10.35□□□□□ -0.75
CHFR-201ENST00000266880 NENFQ9UMX5 172 aa10.35□□□□□ -0.75
CHFR-201ENST00000266880 SNX11Q9Y5W9 270 aa10.35□□□□□ -0.75
CHFR-201ENST00000266880 ELOCQ15369 112 aa10.34□□□□□ -0.75
CHFR-201ENST00000266880 NR0B2Q15466 257 aa10.34□□□□□ -0.75
CHFR-201ENST00000266880 FA2HQ7L5A8 372 aa10.34□□□□□ -0.75
CHFR-201ENST00000266880 SYT13Q7L8C5 426 aa10.34□□□□□ -0.75
CHFR-201ENST00000266880 GRASPQ7Z6J2 395 aaPredicted RBP10.34□□□□□ -0.75
CHFR-201ENST00000266880 EOMESO95936 686 aa10.34□□□□□ -0.75
CHFR-201ENST00000266880 FOXJ1Q92949 421 aa10.34□□□□□ -0.75
CHFR-201ENST00000266880 C5orf52A6NGY3 159 aa10.34□□□□□ -0.75
CHFR-201ENST00000266880 VEGFDO43915 354 aa10.34□□□□□ -0.75
CHFR-201ENST00000266880 TBPL2Q6SJ96 375 aa10.34□□□□□ -0.75
CHFR-201ENST00000266880 ADGRE4PQ86SQ3 457 aa10.34□□□□□ -0.75
CHFR-201ENST00000266880 GLCCI1Q86VQ1 547 aa10.34□□□□□ -0.75
CHFR-201ENST00000266880 TSLPQ969D9 159 aa10.34□□□□□ -0.75
CHFR-201ENST00000266880 P2RY10O00398 339 aa10.34□□□□□ -0.75
CHFR-201ENST00000266880 SHISA6Q6ZSJ9 500 aa10.34□□□□□ -0.75
CHFR-201ENST00000266880 H2BFWTQ7Z2G1 175 aa10.34□□□□□ -0.75
CHFR-201ENST00000266880 DCLRE1CQ96SD1 692 aaKnown RBP10.34□□□□□ -0.75
CHFR-201ENST00000266880 TRAPPC1Q9Y5R8 145 aa10.34□□□□□ -0.75
CHFR-201ENST00000266880 ADGRB2O60241 1585 aa10.34□□□□□ -0.75
CHFR-201ENST00000266880 KIAA2026Q5HYC2 2103 aa10.34□□□□□ -0.75
CHFR-201ENST00000266880 C1QBP02746 253 aa10.34□□□□□ -0.75
CHFR-201ENST00000266880 CHRNB4P30926 498 aa10.34□□□□□ -0.75
CHFR-201ENST00000266880 FBXW5Q969U6 566 aa10.34□□□□□ -0.75
CHFR-201ENST00000266880 STACQ99469 402 aa10.34□□□□□ -0.75
CHFR-201ENST00000266880 ACPTQ9BZG2 426 aa10.34□□□□□ -0.75
CHFR-201ENST00000266880 RNF24Q9Y225 148 aa10.34□□□□□ -0.75
CHFR-201ENST00000266880 ROBO1Q9Y6N7 1651 aa10.34□□□□□ -0.75
CHFR-201ENST00000266880 PCBD1P61457 104 aa10.34□□□□□ -0.75
CHFR-201ENST00000266880 PPP1CBP62140 327 aa10.34□□□□□ -0.75
CHFR-201ENST00000266880 YOD1Q5VVQ6 348 aaPredicted RBP10.34□□□□□ -0.75
CHFR-201ENST00000266880 OR13C8Q8NGS7 320 aa10.34□□□□□ -0.75
CHFR-201ENST00000266880 IGSF8Q969P0 613 aa10.34□□□□□ -0.75
CHFR-201ENST00000266880 FCGR2CP31995 323 aa10.34□□□□□ -0.75
CHFR-201ENST00000266880 ENDOGQ14249 297 aaKnown RBP10.34□□□□□ -0.75
CHFR-201ENST00000266880 FAM74A1Q5RGS3 127 aa10.34□□□□□ -0.75
CHFR-201ENST00000266880 Q6ZRG5 221 aa10.34□□□□□ -0.75
CHFR-201ENST00000266880 IL22RA1Q8N6P7 574 aa10.34□□□□□ -0.75
CHFR-201ENST00000266880 OR5A2Q8NGI9 324 aa10.34□□□□□ -0.75
CHFR-201ENST00000266880 NPY6RQ99463 290 aa10.34□□□□□ -0.75
CHFR-201ENST00000266880 CLDND1Q9NY35 253 aa10.34□□□□□ -0.75
CHFR-201ENST00000266880 LMTK2Q8IWU2 1503 aa10.34□□□□□ -0.75
CHFR-201ENST00000266880 H3BVH4 76 aa10.34□□□□□ -0.75
CHFR-201ENST00000266880 ZNF154Q13106 437 aa10.34□□□□□ -0.75
CHFR-201ENST00000266880 HES1Q14469 280 aa10.34□□□□□ -0.75
CHFR-201ENST00000266880 KDM4DQ6B0I6 523 aa10.34□□□□□ -0.75
CHFR-201ENST00000266880 OR13F1Q8NGS4 319 aa10.34□□□□□ -0.75
CHFR-201ENST00000266880 PIGLQ9Y2B2 252 aa10.34□□□□□ -0.75
CHFR-201ENST00000266880 TIMM8AO60220 97 aaPredicted RBP10.34□□□□□ -0.75
CHFR-201ENST00000266880 GIPP09681 153 aaPredicted RBP10.34□□□□□ -0.75
CHFR-201ENST00000266880 CCKARP32238 428 aa10.34□□□□□ -0.75
CHFR-201ENST00000266880 HTR5AP47898 357 aa10.34□□□□□ -0.75
CHFR-201ENST00000266880 C1orf61Q13536 156 aa10.34□□□□□ -0.75
CHFR-201ENST00000266880 SLC25A32Q9H2D1 315 aa10.34□□□□□ -0.75
CHFR-201ENST00000266880 HOXC11O43248 304 aaPredicted RBP10.33□□□□□ -0.76
CHFR-201ENST00000266880 CNMDO75829 334 aa10.33□□□□□ -0.76
CHFR-201ENST00000266880 SPP1P10451 314 aa10.33□□□□□ -0.76
CHFR-201ENST00000266880 CPOXP36551 454 aa10.33□□□□□ -0.76
CHFR-201ENST00000266880 NHSL2Q5HYW2 709 aa10.33□□□□□ -0.76
CHFR-201ENST00000266880 GGNBP1Q5YKI7 109 aa10.33□□□□□ -0.76
CHFR-201ENST00000266880 PRR27Q6MZM9 219 aa10.33□□□□□ -0.76
CHFR-201ENST00000266880 CDRT4Q8N9R6 151 aa10.33□□□□□ -0.76
CHFR-201ENST00000266880 ACTR3CQ9C0K3 210 aaPredicted RBP10.33□□□□□ -0.76
CHFR-201ENST00000266880 KIF26BQ2KJY2 2108 aa10.33□□□□□ -0.76
CHFR-201ENST00000266880 SFTA3P0C7M3 94 aa10.33□□□□□ -0.76
CHFR-201ENST00000266880 IAPPP10997 89 aa10.33□□□□□ -0.76
CHFR-201ENST00000266880 DUSP1P28562 367 aa10.33□□□□□ -0.76
CHFR-201ENST00000266880 GCAP28676 217 aa10.33□□□□□ -0.76
CHFR-201ENST00000266880 A0A1W2PQU0 124 aa10.33□□□□□ -0.76
CHFR-201ENST00000266880 GABRR3A8MPY1 467 aa10.33□□□□□ -0.76
CHFR-201ENST00000266880 ITGB7P26010 798 aa10.33□□□□□ -0.76
CHFR-201ENST00000266880 VASPP50552 380 aaPredicted RBP10.33□□□□□ -0.76
CHFR-201ENST00000266880 RAB1AP62820 205 aa10.33□□□□□ -0.76
CHFR-201ENST00000266880 USP50Q70EL3 339 aaPredicted RBP10.33□□□□□ -0.76
CHFR-201ENST00000266880 UTP4Q969X6 686 aaKnown RBP10.33□□□□□ -0.76
CHFR-201ENST00000266880 ATF6BQ99941 703 aa10.33□□□□□ -0.76
CHFR-201ENST00000266880 DYNLRB1Q9NP97 96 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms