RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 KCTD14Q9BQ13 255 aaPredicted RBP13.86□□□□□ -0.19
USE1-201ENST00000263897 FAM107BQ9H098 131 aa13.86□□□□□ -0.19
USE1-201ENST00000263897 RNF121Q9H920 327 aa13.86□□□□□ -0.19
USE1-201ENST00000263897 ABCD2Q9UBJ2 740 aa13.86□□□□□ -0.19
USE1-201ENST00000263897 A0A087WUU8 490 aa13.85□□□□□ -0.19
USE1-201ENST00000263897 A8MV72 311 aaPredicted RBP13.85□□□□□ -0.19
USE1-201ENST00000263897 PRSS23O95084 383 aa13.85□□□□□ -0.19
USE1-201ENST00000263897 NCK1P16333 377 aa13.85□□□□□ -0.19
USE1-201ENST00000263897 LSP1P33241 339 aa13.85□□□□□ -0.19
USE1-201ENST00000263897 NR4A2P43354 598 aa13.85□□□□□ -0.19
USE1-201ENST00000263897 RPL27P61353 136 aaKnown RBP13.85□□□□□ -0.19
USE1-201ENST00000263897 GALK2Q01415 458 aa13.85□□□□□ -0.19
USE1-201ENST00000263897 FHL1Q13642 323 aa13.85□□□□□ -0.19
USE1-201ENST00000263897 ANKDD1AQ495B1 522 aa13.85□□□□□ -0.19
USE1-201ENST00000263897 SLC36A2Q495M3 483 aa13.85□□□□□ -0.19
USE1-201ENST00000263897 GKAP1Q5VSY0 366 aaPredicted RBP13.85□□□□□ -0.19
USE1-201ENST00000263897 TMEM53Q6P2H8 277 aa13.85□□□□□ -0.19
USE1-201ENST00000263897 SLC16A14Q7RTX9 510 aa13.85□□□□□ -0.19
USE1-201ENST00000263897 TSEN54Q7Z6J9 526 aaKnown RBP13.85□□□□□ -0.19
USE1-201ENST00000263897 CPLX4Q7Z7G2 160 aa13.85□□□□□ -0.19
USE1-201ENST00000263897 CDK20Q8IZL9 346 aa13.85□□□□□ -0.19
USE1-201ENST00000263897 LRRC75AQ8NAA5 344 aa13.85□□□□□ -0.19
USE1-201ENST00000263897 OR51A7Q8NH64 312 aa13.85□□□□□ -0.19
USE1-201ENST00000263897 NEU4Q8WWR8 484 aaPredicted RBP13.85□□□□□ -0.19
USE1-201ENST00000263897 ACOT11Q8WXI4 607 aaPredicted RBP13.85□□□□□ -0.19
USE1-201ENST00000263897 HDAC2Q92769 488 aaKnown RBP13.85□□□□□ -0.19
USE1-201ENST00000263897 FAM162AQ96A26 154 aa13.85□□□□□ -0.19
USE1-201ENST00000263897 KCNK17Q96T54 332 aa13.85□□□□□ -0.19
USE1-201ENST00000263897 PIMREGQ9BSJ6 248 aa13.85□□□□□ -0.19
USE1-201ENST00000263897 MRPL37Q9BZE1 423 aaKnown RBP13.85□□□□□ -0.19
USE1-201ENST00000263897 SIAEQ9HAT2 523 aa13.85□□□□□ -0.19
USE1-201ENST00000263897 SMURF2Q9HAU4 748 aa13.85□□□□□ -0.19
USE1-201ENST00000263897 ADAM21Q9UKJ8 722 aa13.85□□□□□ -0.19
USE1-201ENST00000263897 ZNF346Q9UL40 294 aaKnown RBP13.85□□□□□ -0.19
USE1-201ENST00000263897 ATRQ13535 2644 aa13.84□□□□□ -0.19
USE1-201ENST00000263897 MALRD1Q5VYJ5 2156 aa13.84□□□□□ -0.19
USE1-201ENST00000263897 GMNCA6NCL1 334 aa13.84□□□□□ -0.19
USE1-201ENST00000263897 SLC2A10O95528 541 aa13.84□□□□□ -0.19
USE1-201ENST00000263897 PTHP01270 115 aa13.84□□□□□ -0.19
USE1-201ENST00000263897 ERCC1P07992 297 aaPredicted RBP13.84□□□□□ -0.19
USE1-201ENST00000263897 ADRA2AP08913 450 aa13.84□□□□□ -0.19
USE1-201ENST00000263897 SAGP10523 405 aaPredicted RBP13.84□□□□□ -0.19
USE1-201ENST00000263897 CTXN1P60606 82 aa13.84□□□□□ -0.19
USE1-201ENST00000263897 RPS23P62266 143 aaKnown RBP13.84□□□□□ -0.19
USE1-201ENST00000263897 MRPS34P82930 218 aaKnown RBP13.84□□□□□ -0.19
USE1-201ENST00000263897 CARTPTQ16568 116 aa13.84□□□□□ -0.19
USE1-201ENST00000263897 GLYATQ6IB77 296 aa13.84□□□□□ -0.19
USE1-201ENST00000263897 SLC25A47Q6Q0C1 308 aa13.84□□□□□ -0.19
USE1-201ENST00000263897 TBPL2Q6SJ96 375 aa13.84□□□□□ -0.19
USE1-201ENST00000263897 OAFQ86UD1 273 aa13.84□□□□□ -0.19
USE1-201ENST00000263897 MEX3DQ86XN8 651 aaKnown RBP13.84□□□□□ -0.19
USE1-201ENST00000263897 HIPK1Q86Z02 1210 aa13.84□□□□□ -0.19
USE1-201ENST00000263897 LRRC18Q8N456 261 aa13.84□□□□□ -0.19
USE1-201ENST00000263897 SLC30A7Q8NEW0 376 aa13.84□□□□□ -0.19
USE1-201ENST00000263897 RBP7Q96R05 134 aa13.84□□□□□ -0.19
USE1-201ENST00000263897 NSRP1Q9H0G5 558 aaKnown RBP13.84□□□□□ -0.19
USE1-201ENST00000263897 C1orf198Q9H425 327 aa13.84□□□□□ -0.19
USE1-201ENST00000263897 NMNAT1Q9HAN9 279 aaPredicted RBP13.84□□□□□ -0.19
USE1-201ENST00000263897 DYNLRB1Q9NP97 96 aa13.84□□□□□ -0.19
USE1-201ENST00000263897 SLC7A8Q9UHI5 535 aa13.84□□□□□ -0.19
USE1-201ENST00000263897 RPS6KA6Q9UK32 745 aa13.84□□□□□ -0.19
USE1-201ENST00000263897 UGT2A1Q9Y4X1 527 aa13.84□□□□□ -0.19
USE1-201ENST00000263897 ENPP4Q9Y6X5 453 aa13.84□□□□□ -0.19
USE1-201ENST00000263897 IGKV1D-43A0A0B4J1Z2 117 aa13.83□□□□□ -0.2
USE1-201ENST00000263897 SLC22A23A1A5C7 686 aa13.83□□□□□ -0.2
USE1-201ENST00000263897 KIAA1324LA8MWY0 1029 aaPredicted RBP13.83□□□□□ -0.2
USE1-201ENST00000263897 EFCAB9A8MZ26 197 aa13.83□□□□□ -0.2
USE1-201ENST00000263897 SYNGR3O43761 229 aa13.83□□□□□ -0.2
USE1-201ENST00000263897 STAMBPO95630 424 aa13.83□□□□□ -0.2
USE1-201ENST00000263897 IGHMP01871 453 aa13.83□□□□□ -0.2
USE1-201ENST00000263897 MMP7P09237 267 aaPredicted RBP13.83□□□□□ -0.2
USE1-201ENST00000263897 NR2C1P13056 603 aa13.83□□□□□ -0.2
USE1-201ENST00000263897 DAOP14920 347 aa13.83□□□□□ -0.2
USE1-201ENST00000263897 CDAP32320 146 aa13.83□□□□□ -0.2
USE1-201ENST00000263897 SLC9A3P48764 834 aa13.83□□□□□ -0.2
USE1-201ENST00000263897 PLP2Q04941 152 aa13.83□□□□□ -0.2
USE1-201ENST00000263897 GGTLC2Q14390 218 aa13.83□□□□□ -0.2
USE1-201ENST00000263897 THEM4Q5T1C6 240 aa13.83□□□□□ -0.2
USE1-201ENST00000263897 CYB5R2Q6BCY4 276 aa13.83□□□□□ -0.2
USE1-201ENST00000263897 ZNF730Q6ZMV8 503 aa13.83□□□□□ -0.2
USE1-201ENST00000263897 TMPRSS11FQ6ZWK6 438 aa13.83□□□□□ -0.2
USE1-201ENST00000263897 MBOAT2Q6ZWT7 520 aa13.83□□□□□ -0.2
USE1-201ENST00000263897 RRM2BQ7LG56 351 aa13.83□□□□□ -0.2
USE1-201ENST00000263897 LRP11Q86VZ4 500 aa13.83□□□□□ -0.2
USE1-201ENST00000263897 CYP4Z1Q86W10 505 aa13.83□□□□□ -0.2
USE1-201ENST00000263897 ZNF540Q8NDQ6 660 aa13.83□□□□□ -0.2
USE1-201ENST00000263897 RBM15BQ8NDT2 890 aaKnown RBP13.83□□□□□ -0.2
USE1-201ENST00000263897 ALG12Q9BV10 488 aa13.83□□□□□ -0.2
USE1-201ENST00000263897 KCNN2Q9H2S1 579 aa13.83□□□□□ -0.2
USE1-201ENST00000263897 MS4A5Q9H3V2 200 aa13.83□□□□□ -0.2
USE1-201ENST00000263897 ANKRD19PQ9H560 264 aa13.83□□□□□ -0.2
USE1-201ENST00000263897 SPAG4Q9NPE6 437 aa13.83□□□□□ -0.2
USE1-201ENST00000263897 ADA2Q9NZK5 511 aa13.83□□□□□ -0.2
USE1-201ENST00000263897 REV1Q9UBZ9 1251 aa13.83□□□□□ -0.2
USE1-201ENST00000263897 EGFL7Q9UHF1 273 aa13.83□□□□□ -0.2
USE1-201ENST00000263897 TRAV27A0A087WT01 109 aa13.82□□□□□ -0.2
USE1-201ENST00000263897 IQCMA0A1B0GVH7 501 aa13.82□□□□□ -0.2
USE1-201ENST00000263897 IGHV4-31P0DP07 118 aa13.82□□□□□ -0.2
USE1-201ENST00000263897 CCL2P13500 99 aa13.82□□□□□ -0.2
USE1-201ENST00000263897 GIFP27352 417 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms