RNA–Protein interactions for RNA: ENST00000263708.6

PTPN4-201, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN4, Length 10,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-201ENST00000263708 SLC25A6P12236 298 aa10.52□□□□□ -0.73
PTPN4-201ENST00000263708 CYB561P49447 251 aa10.52□□□□□ -0.73
PTPN4-201ENST00000263708 TAS2R45P59539 299 aa10.52□□□□□ -0.73
PTPN4-201ENST00000263708 DHRS11Q6UWP2 260 aa10.52□□□□□ -0.73
PTPN4-201ENST00000263708 NUP205Q92621 2012 aa10.52□□□□□ -0.73
PTPN4-201ENST00000263708 NME2P1O60361 137 aa10.52□□□□□ -0.73
PTPN4-201ENST00000263708 MDGA1Q8NFP4 955 aa10.52□□□□□ -0.73
PTPN4-201ENST00000263708 ITPKCQ96DU7 683 aa10.52□□□□□ -0.73
PTPN4-201ENST00000263708 L3HYPDHQ96EM0 354 aa10.52□□□□□ -0.73
PTPN4-201ENST00000263708 XYLT2Q9H1B5 865 aa10.52□□□□□ -0.73
PTPN4-201ENST00000263708 RGPD5Q99666 1765 aa10.52□□□□□ -0.73
PTPN4-201ENST00000263708 SH2D1BO14796 132 aa10.51□□□□□ -0.73
PTPN4-201ENST00000263708 ZNF17P17021 662 aa10.51□□□□□ -0.73
PTPN4-201ENST00000263708 NAXDQ8IW45 347 aa10.51□□□□□ -0.73
PTPN4-201ENST00000263708 SLC22A24Q8N4F4 322 aa10.51□□□□□ -0.73
PTPN4-201ENST00000263708 OR4C5Q8NGB2 326 aa10.51□□□□□ -0.73
PTPN4-201ENST00000263708 MRPS24Q96EL2 167 aaKnown RBP10.51□□□□□ -0.73
PTPN4-201ENST00000263708 CDCA3Q99618 268 aaPredicted RBP10.51□□□□□ -0.73
PTPN4-201ENST00000263708 RTL8AQ9BWD3 113 aa10.51□□□□□ -0.73
PTPN4-201ENST00000263708 ZNF696Q9H7X3 374 aa10.51□□□□□ -0.73
PTPN4-201ENST00000263708 I6L893 689 aaPredicted RBP10.51□□□□□ -0.73
PTPN4-201ENST00000263708 TOX4O94842 621 aa10.51□□□□□ -0.73
PTPN4-201ENST00000263708 TIMP1P01033 207 aa10.51□□□□□ -0.73
PTPN4-201ENST00000263708 ECI1P42126 302 aa10.51□□□□□ -0.73
PTPN4-201ENST00000263708 RPL22L1Q6P5R6 122 aaKnown RBP10.51□□□□□ -0.73
PTPN4-201ENST00000263708 BLNKQ8WV28 456 aa10.51□□□□□ -0.73
PTPN4-201ENST00000263708 KCND3Q9UK17 655 aa10.51□□□□□ -0.73
PTPN4-201ENST00000263708 SCN3AQ9NY46 2000 aa10.51□□□□□ -0.73
PTPN4-201ENST00000263708 FAM208AQ9UK61 1670 aaKnown RBP10.51□□□□□ -0.73
PTPN4-201ENST00000263708 SMLR1H3BR10 107 aa10.51□□□□□ -0.73
PTPN4-201ENST00000263708 ZNF701M0R085 212 aaPredicted RBP10.51□□□□□ -0.73
PTPN4-201ENST00000263708 DNASE2O00115 360 aaPredicted RBP10.51□□□□□ -0.73
PTPN4-201ENST00000263708 TBPL2Q6SJ96 375 aa10.51□□□□□ -0.73
PTPN4-201ENST00000263708 LRFN3Q9BTN0 628 aa10.51□□□□□ -0.73
PTPN4-201ENST00000263708 NARFLQ9H6Q4 476 aa10.51□□□□□ -0.73
PTPN4-201ENST00000263708 WDR76Q9H967 626 aa10.51□□□□□ -0.73
PTPN4-201ENST00000263708 TAS2R5Q9NYW4 299 aa10.51□□□□□ -0.73
PTPN4-201ENST00000263708 NDRG3Q9UGV2 375 aa10.51□□□□□ -0.73
PTPN4-201ENST00000263708 GMPRP36959 345 aa10.51□□□□□ -0.73
PTPN4-201ENST00000263708 ZNF91Q05481 1191 aa10.51□□□□□ -0.73
PTPN4-201ENST00000263708 FRMPD2BQ6IN97 320 aa10.51□□□□□ -0.73
PTPN4-201ENST00000263708 DEFB108BQ8NET1 73 aa10.51□□□□□ -0.73
PTPN4-201ENST00000263708 RAB18Q9NP72 206 aa10.51□□□□□ -0.73
PTPN4-201ENST00000263708 AQP9O43315 295 aa10.51□□□□□ -0.73
PTPN4-201ENST00000263708 ZFP62Q8NB50 900 aaPredicted RBP10.51□□□□□ -0.73
PTPN4-201ENST00000263708 OR10R2Q8NGX6 335 aa10.51□□□□□ -0.73
PTPN4-201ENST00000263708 AK3Q9UIJ7 227 aa10.51□□□□□ -0.73
PTPN4-201ENST00000263708 MED1Q15648 1581 aaPredicted RBP10.51□□□□□ -0.73
PTPN4-201ENST00000263708 ZNF724A8MTY0 619 aa10.51□□□□□ -0.73
PTPN4-201ENST00000263708 WDR5P61964 334 aaKnown RBP10.51□□□□□ -0.73
PTPN4-201ENST00000263708 RPS23P62266 143 aaKnown RBP10.51□□□□□ -0.73
PTPN4-201ENST00000263708 C17orf67Q0P5P2 114 aa10.51□□□□□ -0.73
PTPN4-201ENST00000263708 ZNF586Q9NXT0 402 aa10.51□□□□□ -0.73
PTPN4-201ENST00000263708 ASIC5Q9NY37 505 aa10.51□□□□□ -0.73
PTPN4-201ENST00000263708 SLC23A1Q9UHI7 598 aa10.51□□□□□ -0.73
PTPN4-201ENST00000263708 DNAJC15Q9Y5T4 150 aa10.51□□□□□ -0.73
PTPN4-201ENST00000263708 GJA4P35212 333 aa10.51□□□□□ -0.73
PTPN4-201ENST00000263708 IAH1Q2TAA2 248 aaPredicted RBP10.51□□□□□ -0.73
PTPN4-201ENST00000263708 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.51□□□□□ -0.73
PTPN4-201ENST00000263708 CSNK1EP49674 416 aaKnown RBP10.51□□□□□ -0.73
PTPN4-201ENST00000263708 TBCEQ15813 527 aaPredicted RBP10.51□□□□□ -0.73
PTPN4-201ENST00000263708 SPANXN5Q5MJ07 72 aa10.51□□□□□ -0.73
PTPN4-201ENST00000263708 ANKRD61A6NGH8 418 aa10.51□□□□□ -0.73
PTPN4-201ENST00000263708 SIX6O95475 246 aa10.51□□□□□ -0.73
PTPN4-201ENST00000263708 C1orf105O95561 183 aa10.51□□□□□ -0.73
PTPN4-201ENST00000263708 OR5H8P0DN80 308 aa10.51□□□□□ -0.73
PTPN4-201ENST00000263708 CALCBP10092 127 aa10.51□□□□□ -0.73
PTPN4-201ENST00000263708 NAGAP17050 411 aa10.51□□□□□ -0.73
PTPN4-201ENST00000263708 FUT2Q10981 343 aa10.51□□□□□ -0.73
PTPN4-201ENST00000263708 GTDC1Q4AE62 458 aa10.51□□□□□ -0.73
PTPN4-201ENST00000263708 NXPE3Q969Y0 559 aa10.51□□□□□ -0.73
PTPN4-201ENST00000263708 SETD1AO15047 1707 aaKnown RBP10.5□□□□□ -0.73
PTPN4-201ENST00000263708 ARFGEF2Q9Y6D5 1785 aa10.5□□□□□ -0.73
PTPN4-201ENST00000263708 PRRC2BQ5JSZ5 2229 aaKnown RBP10.5□□□□□ -0.73
PTPN4-201ENST00000263708 KRTDAPP60985 99 aa10.5□□□□□ -0.73
PTPN4-201ENST00000263708 ZNF595Q8IYB9 648 aa10.5□□□□□ -0.73
PTPN4-201ENST00000263708 UMODL1-AS1Q8N2C9 162 aa10.5□□□□□ -0.73
PTPN4-201ENST00000263708 PARP16Q8N5Y8 322 aa10.5□□□□□ -0.73
PTPN4-201ENST00000263708 PLPP7Q8NBV4 271 aa10.5□□□□□ -0.73
PTPN4-201ENST00000263708 LYSMD1Q96S90 227 aa10.5□□□□□ -0.73
PTPN4-201ENST00000263708 PAAF1Q9BRP4 392 aa10.5□□□□□ -0.73
PTPN4-201ENST00000263708 MKRN2Q9H000 416 aaKnown RBP10.5□□□□□ -0.73
PTPN4-201ENST00000263708 EMC7Q9NPA0 242 aa10.5□□□□□ -0.73
PTPN4-201ENST00000263708 SNRNP200O75643 2136 aaKnown RBP10.5□□□□□ -0.73
PTPN4-201ENST00000263708 GLAP06280 429 aa10.5□□□□□ -0.73
PTPN4-201ENST00000263708 MPGP29372 298 aa10.5□□□□□ -0.73
PTPN4-201ENST00000263708 MNX1P50219 401 aaPredicted RBP10.5□□□□□ -0.73
PTPN4-201ENST00000263708 DHRS7BQ6IAN0 325 aaPredicted RBP10.5□□□□□ -0.73
PTPN4-201ENST00000263708 HSD11B1LQ7Z5J1 315 aa10.5□□□□□ -0.73
PTPN4-201ENST00000263708 ANGPTL6Q8NI99 470 aa10.5□□□□□ -0.73
PTPN4-201ENST00000263708 DEFB127Q9H1M4 99 aa10.5□□□□□ -0.73
PTPN4-201ENST00000263708 TXNRD2Q9NNW7 524 aa10.5□□□□□ -0.73
PTPN4-201ENST00000263708 GDE1Q9NZC3 331 aa10.5□□□□□ -0.73
PTPN4-201ENST00000263708 PSMB2P49721 201 aa10.5□□□□□ -0.73
PTPN4-201ENST00000263708 TMEM268Q5VZI3 342 aa10.5□□□□□ -0.73
PTPN4-201ENST00000263708 H3F3CQ6NXT2 135 aa10.5□□□□□ -0.73
PTPN4-201ENST00000263708 DTWD1Q8N5C7 304 aa10.5□□□□□ -0.73
PTPN4-201ENST00000263708 CD200R1Q8TD46 325 aa10.5□□□□□ -0.73
PTPN4-201ENST00000263708 GPR119Q8TDV5 335 aa10.5□□□□□ -0.73
PTPN4-201ENST00000263708 ZNF300Q96RE9 604 aaPredicted RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms