RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 SLC26A11Q86WA9 606 aa3.26□□□□□ -1.89
CCDC54-201ENST00000261058 GID4Q8IVV7 300 aa3.26□□□□□ -1.89
CCDC54-201ENST00000261058 LRRC8AQ8IWT6 810 aa3.26□□□□□ -1.89
CCDC54-201ENST00000261058 SPAG16Q8N0X2 631 aa3.26□□□□□ -1.89
CCDC54-201ENST00000261058 BPIFB2Q8N4F0 458 aa3.26□□□□□ -1.89
CCDC54-201ENST00000261058 SPEM1Q8N4L4 309 aa3.26□□□□□ -1.89
CCDC54-201ENST00000261058 ZNF525Q8N782 197 aa3.26□□□□□ -1.89
CCDC54-201ENST00000261058 FAM86B1Q8N7N1 296 aa3.26□□□□□ -1.89
CCDC54-201ENST00000261058 OR9G4Q8NGQ1 327 aa3.26□□□□□ -1.89
CCDC54-201ENST00000261058 LHFPL5Q8TAF8 219 aa3.26□□□□□ -1.89
CCDC54-201ENST00000261058 HTR3CQ8WXA8 447 aa3.26□□□□□ -1.89
CCDC54-201ENST00000261058 CACNG8Q8WXS5 425 aa3.26□□□□□ -1.89
CCDC54-201ENST00000261058 C8orf44Q96CB5 159 aa3.26□□□□□ -1.89
CCDC54-201ENST00000261058 C10orf35Q96D05 121 aa3.26□□□□□ -1.89
CCDC54-201ENST00000261058 VSIG2Q96IQ7 327 aa3.26□□□□□ -1.89
CCDC54-201ENST00000261058 PLEKHA8Q96JA3 519 aa3.26□□□□□ -1.89
CCDC54-201ENST00000261058 CYP2S1Q96SQ9 504 aa3.26□□□□□ -1.89
CCDC54-201ENST00000261058 P2RY13Q9BPV8 354 aa3.26□□□□□ -1.89
CCDC54-201ENST00000261058 TEKT3Q9BXF9 490 aa3.26□□□□□ -1.89
CCDC54-201ENST00000261058 DEFB126Q9BYW3 111 aa3.26□□□□□ -1.89
CCDC54-201ENST00000261058 OR51B6Q9H340 312 aa3.26□□□□□ -1.89
CCDC54-201ENST00000261058 GOLPH3Q9H4A6 298 aa3.26□□□□□ -1.89
CCDC54-201ENST00000261058 RAB18Q9NP72 206 aa3.26□□□□□ -1.89
CCDC54-201ENST00000261058 VNN3Q9NY84 501 aa3.26□□□□□ -1.89
CCDC54-201ENST00000261058 ADA2Q9NZK5 511 aa3.26□□□□□ -1.89
CCDC54-201ENST00000261058 DPM3Q9P2X0 92 aa3.26□□□□□ -1.89
CCDC54-201ENST00000261058 CLEC2DQ9UHP7 191 aa3.26□□□□□ -1.89
CCDC54-201ENST00000261058 TP53TG3Q9ULZ0 132 aa3.26□□□□□ -1.89
CCDC54-201ENST00000261058 L3MBTL1Q9Y468 752 aa3.26□□□□□ -1.89
CCDC54-201ENST00000261058 PCDH11XQ9BZA7 1347 aa3.25□□□□□ -1.89
CCDC54-201ENST00000261058 KCNE1BA0A087WTH5 132 aa3.25□□□□□ -1.89
CCDC54-201ENST00000261058 A0A1B0GVG6 124 aa3.25□□□□□ -1.89
CCDC54-201ENST00000261058 MGAT4DA6NG13 374 aa3.25□□□□□ -1.89
CCDC54-201ENST00000261058 E7ESA3 106 aa3.25□□□□□ -1.89
CCDC54-201ENST00000261058 NPIPA7E9PJI5 369 aa3.25□□□□□ -1.89
CCDC54-201ENST00000261058 NDUFS6O75380 124 aaKnown RBP3.25□□□□□ -1.89
CCDC54-201ENST00000261058 SERPINB7O75635 380 aa3.25□□□□□ -1.89
CCDC54-201ENST00000261058 PLEKHA8P1O95397 391 aa3.25□□□□□ -1.89
CCDC54-201ENST00000261058 SNAP29O95721 258 aa3.25□□□□□ -1.89
CCDC54-201ENST00000261058 CALB1P05937 261 aa3.25□□□□□ -1.89
CCDC54-201ENST00000261058 CD3GP09693 182 aa3.25□□□□□ -1.89
CCDC54-201ENST00000261058 TFPTP0C1Z6 253 aa3.25□□□□□ -1.89
CCDC54-201ENST00000261058 NPIPA8P0DM63 369 aa3.25□□□□□ -1.89
CCDC54-201ENST00000261058 COX5BP10606 129 aa3.25□□□□□ -1.89
CCDC54-201ENST00000261058 CBR1P16152 277 aa3.25□□□□□ -1.89
CCDC54-201ENST00000261058 TBXA2RP21731 343 aa3.25□□□□□ -1.89
CCDC54-201ENST00000261058 EMP2P54851 167 aa3.25□□□□□ -1.89
CCDC54-201ENST00000261058 RND3P61587 244 aa3.25□□□□□ -1.89
CCDC54-201ENST00000261058 C2orf54Q08AI8 447 aa3.25□□□□□ -1.89
CCDC54-201ENST00000261058 ASAH1Q13510 395 aa3.25□□□□□ -1.89
CCDC54-201ENST00000261058 PON3Q15166 354 aa3.25□□□□□ -1.89
CCDC54-201ENST00000261058 SLC5A12Q1EHB4 618 aa3.25□□□□□ -1.89
CCDC54-201ENST00000261058 SLX4IPQ5VYV7 408 aa3.25□□□□□ -1.89
CCDC54-201ENST00000261058 MFSD14CQ5VZR4 134 aa3.25□□□□□ -1.89
CCDC54-201ENST00000261058 ZNF470Q6ECI4 717 aa3.25□□□□□ -1.89
CCDC54-201ENST00000261058 SPOPLQ6IQ16 392 aa3.25□□□□□ -1.89
CCDC54-201ENST00000261058 KCNIP4Q6PIL6 250 aa3.25□□□□□ -1.89
CCDC54-201ENST00000261058 SLC35D2Q76EJ3 337 aa3.25□□□□□ -1.89
CCDC54-201ENST00000261058 MRPL21Q7Z2W9 205 aaKnown RBP3.25□□□□□ -1.89
CCDC54-201ENST00000261058 ANKRD37Q7Z713 158 aa3.25□□□□□ -1.89
CCDC54-201ENST00000261058 IFNEQ86WN2 208 aa3.25□□□□□ -1.89
CCDC54-201ENST00000261058 MCOLN2Q8IZK6 566 aa3.25□□□□□ -1.89
CCDC54-201ENST00000261058 TRAM1L1Q8N609 369 aa3.25□□□□□ -1.89
CCDC54-201ENST00000261058 CD177Q8N6Q3 437 aa3.25□□□□□ -1.89
CCDC54-201ENST00000261058 C12orf29Q8N999 325 aa3.25□□□□□ -1.89
CCDC54-201ENST00000261058 TTC29Q8NA56 475 aaPredicted RBP3.25□□□□□ -1.89
CCDC54-201ENST00000261058 OR51L1Q8NGJ5 315 aa3.25□□□□□ -1.89
CCDC54-201ENST00000261058 NANPQ8TBE9 248 aa3.25□□□□□ -1.89
CCDC54-201ENST00000261058 ESR2Q92731 530 aa3.25□□□□□ -1.89
CCDC54-201ENST00000261058 PELI1Q96FA3 418 aa3.25□□□□□ -1.89
CCDC54-201ENST00000261058 DUS3LQ96G46 650 aaKnown RBP3.25□□□□□ -1.89
CCDC54-201ENST00000261058 TMEM80Q96HE8 168 aa3.25□□□□□ -1.89
CCDC54-201ENST00000261058 TAAR1Q96RJ0 339 aa3.25□□□□□ -1.89
CCDC54-201ENST00000261058 C19orf24Q9BVV8 132 aa3.25□□□□□ -1.89
CCDC54-201ENST00000261058 LRRN3Q9H3W5 708 aa3.25□□□□□ -1.89
CCDC54-201ENST00000261058 CAB39LQ9H9S4 337 aa3.25□□□□□ -1.89
CCDC54-201ENST00000261058 FOLH1BQ9HBA9 442 aa3.25□□□□□ -1.89
CCDC54-201ENST00000261058 ADAP2Q9NPF8 381 aa3.25□□□□□ -1.89
CCDC54-201ENST00000261058 MIEF1Q9NQG6 463 aa3.25□□□□□ -1.89
CCDC54-201ENST00000261058 DYRK4Q9NR20 520 aa3.25□□□□□ -1.89
CCDC54-201ENST00000261058 STMN3Q9NZ72 180 aa3.25□□□□□ -1.89
CCDC54-201ENST00000261058 GNG12Q9UBI6 72 aa3.25□□□□□ -1.89
CCDC54-201ENST00000261058 PHF11Q9UIL8 331 aa3.25□□□□□ -1.89
CCDC54-201ENST00000261058 NPIPA1Q9UND3 350 aa3.25□□□□□ -1.89
CCDC54-201ENST00000261058 RBMX2Q9Y388 322 aaKnown RBP3.25□□□□□ -1.89
CCDC54-201ENST00000261058 HEY1Q9Y5J3 304 aa3.25□□□□□ -1.89
CCDC54-201ENST00000261058 AK9Q5TCS8 1911 aa3.24□□□□□ -1.89
CCDC54-201ENST00000261058 CECR2Q9BXF3 1484 aa3.24□□□□□ -1.89
CCDC54-201ENST00000261058 KBTBD11-OT1A0A1B0GTJ5 212 aa3.24□□□□□ -1.89
CCDC54-201ENST00000261058 GNG14A0A1W2PPG7 69 aa3.24□□□□□ -1.89
CCDC54-201ENST00000261058 ZNF233A6NK53 670 aa3.24□□□□□ -1.89
CCDC54-201ENST00000261058 ZNF98A6NK75 572 aa3.24□□□□□ -1.89
CCDC54-201ENST00000261058 K7ENP7 123 aa3.24□□□□□ -1.89
CCDC54-201ENST00000261058 OR7A17O14581 309 aa3.24□□□□□ -1.89
CCDC54-201ENST00000261058 EIF3HO15372 352 aaKnown RBP eCLIP3.24□□□□□ -1.89
CCDC54-201ENST00000261058 CLOCKO15516 846 aa3.24□□□□□ -1.89
CCDC54-201ENST00000261058 TNNC2P02585 160 aa3.24□□□□□ -1.89
CCDC54-201ENST00000261058 IFNA6P05013 189 aa3.24□□□□□ -1.89
CCDC54-201ENST00000261058 IFNA16P05015 189 aa3.24□□□□□ -1.89
CCDC54-201ENST00000261058 SERPINA5P05154 406 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms