RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 SEC23BQ15437 767 aa11.09□□□□□ -0.63
VPREB3-201ENST00000248948 DNAL1Q4LDG9 190 aa11.09□□□□□ -0.63
VPREB3-201ENST00000248948 TBPL2Q6SJ96 375 aa11.09□□□□□ -0.63
VPREB3-201ENST00000248948 RINLQ6ZS11 566 aa11.09□□□□□ -0.63
VPREB3-201ENST00000248948 MYPOPQ86VE0 399 aaPredicted RBP11.09□□□□□ -0.63
VPREB3-201ENST00000248948 DHFR2Q86XF0 187 aa11.09□□□□□ -0.63
VPREB3-201ENST00000248948 ZDHHC21Q8IVQ6 265 aa11.09□□□□□ -0.63
VPREB3-201ENST00000248948 SYT14Q8NB59 555 aa11.09□□□□□ -0.63
VPREB3-201ENST00000248948 RSRC1Q96IZ7 334 aaKnown RBP11.09□□□□□ -0.63
VPREB3-201ENST00000248948 ZNF75AQ96N20 296 aa11.09□□□□□ -0.63
VPREB3-201ENST00000248948 C1orf198Q9H425 327 aa11.09□□□□□ -0.63
VPREB3-201ENST00000248948 SEC61A2Q9H9S3 476 aa11.09□□□□□ -0.63
VPREB3-201ENST00000248948 CA10Q9NS85 328 aa11.09□□□□□ -0.63
VPREB3-201ENST00000248948 TAS2R1Q9NYW7 299 aa11.09□□□□□ -0.63
VPREB3-201ENST00000248948 AURKCQ9UQB9 309 aa11.09□□□□□ -0.63
VPREB3-201ENST00000248948 SIGLEC7Q9Y286 467 aa11.09□□□□□ -0.63
VPREB3-201ENST00000248948 CHD3Q12873 2000 aaKnown RBP11.08□□□□□ -0.64
VPREB3-201ENST00000248948 IGHV2OR16-5A0A0B4J2B6 119 aa11.08□□□□□ -0.64
VPREB3-201ENST00000248948 AHCYL1O43865 530 aa11.08□□□□□ -0.64
VPREB3-201ENST00000248948 SLC2A10O95528 541 aa11.08□□□□□ -0.64
VPREB3-201ENST00000248948 STAMBPO95630 424 aa11.08□□□□□ -0.64
VPREB3-201ENST00000248948 CD14P08571 375 aa11.08□□□□□ -0.64
VPREB3-201ENST00000248948 HOXB6P17509 224 aaKnown RBP11.08□□□□□ -0.64
VPREB3-201ENST00000248948 NPR2P20594 1047 aa11.08□□□□□ -0.64
VPREB3-201ENST00000248948 FPR3P25089 353 aa11.08□□□□□ -0.64
VPREB3-201ENST00000248948 CALCRP30988 508 aa11.08□□□□□ -0.64
VPREB3-201ENST00000248948 RRM2P31350 389 aa11.08□□□□□ -0.64
VPREB3-201ENST00000248948 RPL4P36578 427 aaKnown RBP11.08□□□□□ -0.64
VPREB3-201ENST00000248948 ACVR1BP36896 505 aa11.08□□□□□ -0.64
VPREB3-201ENST00000248948 IFNGR2P38484 337 aa11.08□□□□□ -0.64
VPREB3-201ENST00000248948 CDKN1AP38936 164 aa11.08□□□□□ -0.64
VPREB3-201ENST00000248948 PTDSS1P48651 473 aaKnown RBP11.08□□□□□ -0.64
VPREB3-201ENST00000248948 CHRNB3Q05901 458 aa11.08□□□□□ -0.64
VPREB3-201ENST00000248948 EFNB3Q15768 340 aa11.08□□□□□ -0.64
VPREB3-201ENST00000248948 SLC36A2Q495M3 483 aa11.08□□□□□ -0.64
VPREB3-201ENST00000248948 THEM4Q5T1C6 240 aa11.08□□□□□ -0.64
VPREB3-201ENST00000248948 CYP2R1Q6VVX0 501 aa11.08□□□□□ -0.64
VPREB3-201ENST00000248948 FAM122BQ7Z309 247 aa11.08□□□□□ -0.64
VPREB3-201ENST00000248948 IGFN1Q86VF2 1251 aa11.08□□□□□ -0.64
VPREB3-201ENST00000248948 MEX3DQ86XN8 651 aaKnown RBP11.08□□□□□ -0.64
VPREB3-201ENST00000248948 ARIH2OSQ8N7S6 290 aa11.08□□□□□ -0.64
VPREB3-201ENST00000248948 ZNF570Q96NI8 536 aa11.08□□□□□ -0.64
VPREB3-201ENST00000248948 TNFRSF13CQ96RJ3 184 aa11.08□□□□□ -0.64
VPREB3-201ENST00000248948 TRIM15Q9C019 465 aa11.08□□□□□ -0.64
VPREB3-201ENST00000248948 FBXO9Q9UK97 447 aaPredicted RBP11.08□□□□□ -0.64
VPREB3-201ENST00000248948 UGT2A1Q9Y4X1 527 aa11.08□□□□□ -0.64
VPREB3-201ENST00000248948 UNC119BA6NIH7 251 aa11.07□□□□□ -0.64
VPREB3-201ENST00000248948 KRT36O76013 467 aa11.07□□□□□ -0.64
VPREB3-201ENST00000248948 UBOX5O94941 541 aa11.07□□□□□ -0.64
VPREB3-201ENST00000248948 APEHP13798 732 aaKnown RBP11.07□□□□□ -0.64
VPREB3-201ENST00000248948 ZNF26P17031 533 aaPredicted RBP11.07□□□□□ -0.64
VPREB3-201ENST00000248948 SDHAP31040 664 aa11.07□□□□□ -0.64
VPREB3-201ENST00000248948 GIPRP48546 466 aa11.07□□□□□ -0.64
VPREB3-201ENST00000248948 SNRPD2P62316 118 aaKnown RBP11.07□□□□□ -0.64
VPREB3-201ENST00000248948 RAB1AP62820 205 aa11.07□□□□□ -0.64
VPREB3-201ENST00000248948 MYBPC1Q00872 1141 aa11.07□□□□□ -0.64
VPREB3-201ENST00000248948 FMODQ06828 376 aa11.07□□□□□ -0.64
VPREB3-201ENST00000248948 KRR1Q13601 381 aaKnown RBP11.07□□□□□ -0.64
VPREB3-201ENST00000248948 GPR139Q6DWJ6 353 aa11.07□□□□□ -0.64
VPREB3-201ENST00000248948 TMEM53Q6P2H8 277 aa11.07□□□□□ -0.64
VPREB3-201ENST00000248948 SLC25A47Q6Q0C1 308 aa11.07□□□□□ -0.64
VPREB3-201ENST00000248948 FOXL2NBQ6ZUU3 175 aa11.07□□□□□ -0.64
VPREB3-201ENST00000248948 SLC16A14Q7RTX9 510 aa11.07□□□□□ -0.64
VPREB3-201ENST00000248948 ADCK1Q86TW2 530 aa11.07□□□□□ -0.64
VPREB3-201ENST00000248948 SKA3Q8IX90 412 aa11.07□□□□□ -0.64
VPREB3-201ENST00000248948 LINC00471Q8N535 108 aa11.07□□□□□ -0.64
VPREB3-201ENST00000248948 OR52J3Q8NH60 311 aa11.07□□□□□ -0.64
VPREB3-201ENST00000248948 FANK1Q8TC84 345 aa11.07□□□□□ -0.64
VPREB3-201ENST00000248948 NABP1Q96AH0 204 aa11.07□□□□□ -0.64
VPREB3-201ENST00000248948 CCDC124Q96CT7 223 aaKnown RBP11.07□□□□□ -0.64
VPREB3-201ENST00000248948 C18orf12Q96KH6 178 aa11.07□□□□□ -0.64
VPREB3-201ENST00000248948 COX4I2Q96KJ9 171 aa11.07□□□□□ -0.64
VPREB3-201ENST00000248948 Q96MF0 132 aa11.07□□□□□ -0.64
VPREB3-201ENST00000248948 RBP7Q96R05 134 aa11.07□□□□□ -0.64
VPREB3-201ENST00000248948 CACNG6Q9BXT2 260 aa11.07□□□□□ -0.64
VPREB3-201ENST00000248948 NRIP3Q9NQ35 241 aa11.07□□□□□ -0.64
VPREB3-201ENST00000248948 GRHPRQ9UBQ7 328 aa11.07□□□□□ -0.64
VPREB3-201ENST00000248948 ZNF346Q9UL40 294 aaKnown RBP11.07□□□□□ -0.64
VPREB3-201ENST00000248948 TMCC3Q9ULS5 477 aa11.07□□□□□ -0.64
VPREB3-201ENST00000248948 ADAM18Q9Y3Q7 739 aa11.07□□□□□ -0.64
VPREB3-201ENST00000248948 NSD1Q96L73 2696 aaPredicted RBP11.07□□□□□ -0.64
VPREB3-201ENST00000248948 CR1P17927 2039 aa11.06□□□□□ -0.64
VPREB3-201ENST00000248948 XKRYO14609 159 aa11.06□□□□□ -0.64
VPREB3-201ENST00000248948 OR10H3O60404 316 aa11.06□□□□□ -0.64
VPREB3-201ENST00000248948 PTP4A3O75365 173 aa11.06□□□□□ -0.64
VPREB3-201ENST00000248948 SNAP29O95721 258 aa11.06□□□□□ -0.64
VPREB3-201ENST00000248948 PTHP01270 115 aa11.06□□□□□ -0.64
VPREB3-201ENST00000248948 IGHV4-39P01824 125 aa11.06□□□□□ -0.64
VPREB3-201ENST00000248948 SERPINA5P05154 406 aa11.06□□□□□ -0.64
VPREB3-201ENST00000248948 ERVK-25P63136 954 aa11.06□□□□□ -0.64
VPREB3-201ENST00000248948 HGFACQ04756 655 aa11.06□□□□□ -0.64
VPREB3-201ENST00000248948 PIGFQ07326 219 aa11.06□□□□□ -0.64
VPREB3-201ENST00000248948 TRAP1Q12931 704 aaKnown RBP11.06□□□□□ -0.64
VPREB3-201ENST00000248948 SNTB2Q13425 540 aaKnown RBP11.06□□□□□ -0.64
VPREB3-201ENST00000248948 GK3PQ14409 553 aa11.06□□□□□ -0.64
VPREB3-201ENST00000248948 ADIPOQQ15848 244 aa11.06□□□□□ -0.64
VPREB3-201ENST00000248948 SWI5Q1ZZU3 235 aa11.06□□□□□ -0.64
VPREB3-201ENST00000248948 FAM98BQ52LJ0 330 aaKnown RBP11.06□□□□□ -0.64
VPREB3-201ENST00000248948 MESTQ5EB52 335 aa11.06□□□□□ -0.64
VPREB3-201ENST00000248948 SMARCD3Q6STE5 483 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms