RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 TRAV18A0A075B6X5 111 aa23.05■■□□□ 1.28
RAB40C-201ENST00000248139 BLACEA4D250 179 aa23.05■■□□□ 1.28
RAB40C-201ENST00000248139 FRG2CA6NGY1 282 aa23.05■■□□□ 1.28
RAB40C-201ENST00000248139 ZNF254O75437 659 aa23.05■■□□□ 1.28
RAB40C-201ENST00000248139 VSIG10L2P0DP72 767 aa23.05■■□□□ 1.28
RAB40C-201ENST00000248139 HLA-DOBP13765 273 aa23.05■■□□□ 1.28
RAB40C-201ENST00000248139 CTLA4P16410 223 aa23.05■■□□□ 1.28
RAB40C-201ENST00000248139 COL28A1Q2UY09 1125 aa23.05■■□□□ 1.28
RAB40C-201ENST00000248139 LANCL3Q6ZV70 420 aa23.05■■□□□ 1.28
RAB40C-201ENST00000248139 LAT2Q9GZY6 243 aa23.05■■□□□ 1.28
RAB40C-201ENST00000248139 CLEC4MQ9H2X3 399 aaPredicted RBP23.05■■□□□ 1.28
RAB40C-201ENST00000248139 COQ3Q9NZJ6 369 aa23.05■■□□□ 1.28
RAB40C-201ENST00000248139 B9D1Q9UPM9 204 aa23.05■■□□□ 1.28
RAB40C-201ENST00000248139 TRBV5-7A0A0A0MS05 114 aa23.05■■□□□ 1.28
RAB40C-201ENST00000248139 A0A1B0GUH1 482 aa23.05■■□□□ 1.28
RAB40C-201ENST00000248139 ZSCAN5BA6NJL1 495 aa23.05■■□□□ 1.28
RAB40C-201ENST00000248139 SLC25A12O75746 678 aa23.05■■□□□ 1.28
RAB40C-201ENST00000248139 IGLV3-19P01714 112 aa23.05■■□□□ 1.28
RAB40C-201ENST00000248139 NME1P15531 152 aaKnown RBP23.05■■□□□ 1.28
RAB40C-201ENST00000248139 CD38P28907 300 aa23.05■■□□□ 1.28
RAB40C-201ENST00000248139 POU3F4P49335 361 aa23.05■■□□□ 1.28
RAB40C-201ENST00000248139 INSM1Q01101 510 aaPredicted RBP23.05■■□□□ 1.28
RAB40C-201ENST00000248139 MFGE8Q08431 387 aaPredicted RBP23.05■■□□□ 1.28
RAB40C-201ENST00000248139 PLCXD2Q0VAA5 305 aa23.05■■□□□ 1.28
RAB40C-201ENST00000248139 RAB30Q15771 203 aa23.05■■□□□ 1.28
RAB40C-201ENST00000248139 COL13A1Q5TAT6 717 aaPredicted RBP23.05■■□□□ 1.28
RAB40C-201ENST00000248139 TSTD1Q8NFU3 115 aa23.05■■□□□ 1.28
RAB40C-201ENST00000248139 DCBLD2Q96PD2 775 aa23.05■■□□□ 1.28
RAB40C-201ENST00000248139 PTDSS2Q9BVG9 487 aa23.05■■□□□ 1.28
RAB40C-201ENST00000248139 MRPL22Q9NWU5 206 aaKnown RBP23.05■■□□□ 1.28
RAB40C-201ENST00000248139 NPTNQ9Y639 398 aa23.05■■□□□ 1.28
RAB40C-201ENST00000248139 RGS11O94810 467 aa23.05■■□□□ 1.28
RAB40C-201ENST00000248139 RLN1P04808 185 aa23.05■■□□□ 1.28
RAB40C-201ENST00000248139 CSRP1P21291 193 aaKnown RBP23.05■■□□□ 1.28
RAB40C-201ENST00000248139 PSMA6P60900 246 aaKnown RBP23.05■■□□□ 1.28
RAB40C-201ENST00000248139 ZNF227Q86WZ6 799 aa23.05■■□□□ 1.28
RAB40C-201ENST00000248139 OR4C16Q8NGL9 310 aa23.05■■□□□ 1.28
RAB40C-201ENST00000248139 OR1L3Q8NH93 324 aa23.05■■□□□ 1.28
RAB40C-201ENST00000248139 THAP3Q8WTV1 239 aaPredicted RBP23.05■■□□□ 1.28
RAB40C-201ENST00000248139 STEAP1Q9UHE8 339 aa23.05■■□□□ 1.28
RAB40C-201ENST00000248139 HLA-DQA1Q5Y7H0 255 aa23.04■■□□□ 1.28
RAB40C-201ENST00000248139 GKN2Q86XP6 184 aa23.04■■□□□ 1.28
RAB40C-201ENST00000248139 GPR119Q8TDV5 335 aa23.04■■□□□ 1.28
RAB40C-201ENST00000248139 RPS10-NUDT3A0A1W2PQS6 291 aa23.04■■□□□ 1.28
RAB40C-201ENST00000248139 CXCL2P19875 107 aa23.04■■□□□ 1.28
RAB40C-201ENST00000248139 ELFN2Q5R3F8 820 aa23.04■■□□□ 1.28
RAB40C-201ENST00000248139 C1QTNF6Q9BXI9 259 aa23.04■■□□□ 1.28
RAB40C-201ENST00000248139 ZMAT3Q9HA38 289 aaKnown RBP23.04■■□□□ 1.28
RAB40C-201ENST00000248139 GLTPQ9NZD2 209 aa23.04■■□□□ 1.28
RAB40C-201ENST00000248139 MED12Q93074 2177 aa23.03■■□□□ 1.28
RAB40C-201ENST00000248139 FER1L5A0AVI2 2057 aa23.03■■□□□ 1.28
RAB40C-201ENST00000248139 TMEM212A6NML5 194 aa23.03■■□□□ 1.28
RAB40C-201ENST00000248139 I3L521 148 aa23.03■■□□□ 1.28
RAB40C-201ENST00000248139 SULT1B1O43704 296 aa23.03■■□□□ 1.28
RAB40C-201ENST00000248139 CTAG2O75638 210 aa23.03■■□□□ 1.28
RAB40C-201ENST00000248139 OR6A2O95222 327 aa23.03■■□□□ 1.28
RAB40C-201ENST00000248139 C2orf76Q3KRA6 126 aa23.03■■□□□ 1.28
RAB40C-201ENST00000248139 GPR139Q6DWJ6 353 aa23.03■■□□□ 1.28
RAB40C-201ENST00000248139 CCDC28AQ8IWP9 274 aa23.03■■□□□ 1.28
RAB40C-201ENST00000248139 OR5M1Q8NGP8 315 aa23.03■■□□□ 1.28
RAB40C-201ENST00000248139 DUSP19Q8WTR2 217 aa23.03■■□□□ 1.28
RAB40C-201ENST00000248139 PMEPA1Q969W9 287 aa23.03■■□□□ 1.28
RAB40C-201ENST00000248139 OMA1Q96E52 524 aa23.03■■□□□ 1.28
RAB40C-201ENST00000248139 ELMOD3Q96FG2 381 aa23.03■■□□□ 1.28
RAB40C-201ENST00000248139 CCDC120Q96HB5 630 aa23.03■■□□□ 1.28
RAB40C-201ENST00000248139 MKL2Q9ULH7 1088 aa23.03■■□□□ 1.28
RAB40C-201ENST00000248139 RNF215Q9Y6U7 377 aa23.03■■□□□ 1.28
RAB40C-201ENST00000248139 RHPN2P1A8MT19 583 aa23.03■■□□□ 1.28
RAB40C-201ENST00000248139 SUSD5O60279 629 aa23.03■■□□□ 1.28
RAB40C-201ENST00000248139 RBBP9O75884 186 aa23.03■■□□□ 1.28
RAB40C-201ENST00000248139 FOLR1P15328 257 aa23.03■■□□□ 1.28
RAB40C-201ENST00000248139 ABCD3P28288 659 aa23.03■■□□□ 1.28
RAB40C-201ENST00000248139 CFHR1Q03591 330 aa23.03■■□□□ 1.28
RAB40C-201ENST00000248139 EMC4Q5J8M3 183 aa23.03■■□□□ 1.28
RAB40C-201ENST00000248139 OLFML2AQ68BL7 652 aa23.03■■□□□ 1.28
RAB40C-201ENST00000248139 TMEM205Q6UW68 189 aa23.03■■□□□ 1.28
RAB40C-201ENST00000248139 CHMP1BQ7LBR1 199 aa23.03■■□□□ 1.28
RAB40C-201ENST00000248139 SDR16C5Q8N3Y7 309 aa23.03■■□□□ 1.28
RAB40C-201ENST00000248139 ZNF417Q8TAU3 575 aa23.03■■□□□ 1.28
RAB40C-201ENST00000248139 MCHR2Q969V1 340 aa23.03■■□□□ 1.28
RAB40C-201ENST00000248139 GINS4Q9BRT9 223 aa23.03■■□□□ 1.28
RAB40C-201ENST00000248139 IGKV3D-11A0A0A0MRZ8 115 aa23.02■■□□□ 1.28
RAB40C-201ENST00000248139 NAP1L6A6NFF2 107 aa23.02■■□□□ 1.28
RAB40C-201ENST00000248139 M0R233 179 aa23.02■■□□□ 1.28
RAB40C-201ENST00000248139 NDUFB6O95139 128 aa23.02■■□□□ 1.28
RAB40C-201ENST00000248139 ARL4DP49703 201 aa23.02■■□□□ 1.28
RAB40C-201ENST00000248139 ADAM8P78325 824 aa23.02■■□□□ 1.28
RAB40C-201ENST00000248139 EGR3Q06889 387 aa23.02■■□□□ 1.28
RAB40C-201ENST00000248139 SLC17A1Q14916 467 aa23.02■■□□□ 1.28
RAB40C-201ENST00000248139 WDFY1Q8IWB7 410 aa23.02■■□□□ 1.28
RAB40C-201ENST00000248139 PELOQ9BRX2 385 aaKnown RBP23.02■■□□□ 1.28
RAB40C-201ENST00000248139 NARFLQ9H6Q4 476 aa23.02■■□□□ 1.28
RAB40C-201ENST00000248139 FBXL3Q9UKT7 428 aa23.02■■□□□ 1.28
RAB40C-201ENST00000248139 TRAV36DV7A0A075B6V5 113 aa23.02■■□□□ 1.28
RAB40C-201ENST00000248139 PRSS37A4D1T9 235 aa23.02■■□□□ 1.28
RAB40C-201ENST00000248139 FITM1A5D6W6 292 aa23.02■■□□□ 1.28
RAB40C-201ENST00000248139 LILRA5A6NI73 299 aa23.02■■□□□ 1.28
RAB40C-201ENST00000248139 XRCC3O43542 346 aa23.02■■□□□ 1.28
RAB40C-201ENST00000248139 NDUFAF7Q7L592 441 aa23.02■■□□□ 1.28
RAB40C-201ENST00000248139 SREK1IP1Q8N9Q2 155 aaPredicted RBP23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms