RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 OTPQ5XKR4 325 aa13.56□□□□□ -0.24
HDHD3-201ENST00000238379 HBMQ6B0K9 141 aa13.56□□□□□ -0.24
HDHD3-201ENST00000238379 RPTNQ6XPR3 784 aa13.56□□□□□ -0.24
HDHD3-201ENST00000238379 UBQLNLQ8IYU4 475 aa13.56□□□□□ -0.24
HDHD3-201ENST00000238379 MRPL48Q96GC5 212 aaKnown RBP13.56□□□□□ -0.24
HDHD3-201ENST00000238379 SLIRPQ9GZT3 109 aaKnown RBP13.56□□□□□ -0.24
HDHD3-201ENST00000238379 ST6GALNAC2Q9UJ37 374 aa13.56□□□□□ -0.24
HDHD3-201ENST00000238379 GRIP1Q9Y3R0 1128 aa13.56□□□□□ -0.24
HDHD3-201ENST00000238379 CSAG2Q9Y5P2 127 aa13.56□□□□□ -0.24
HDHD3-201ENST00000238379 KCNMB2Q9Y691 235 aa13.56□□□□□ -0.24
HDHD3-201ENST00000238379 TRDV1A0A1B0GX56 115 aa13.55□□□□□ -0.24
HDHD3-201ENST00000238379 CEACAM4O75871 244 aa13.55□□□□□ -0.24
HDHD3-201ENST00000238379 IGHG1P01857 330 aa13.55□□□□□ -0.24
HDHD3-201ENST00000238379 FGF9P31371 208 aaPredicted RBP13.55□□□□□ -0.24
HDHD3-201ENST00000238379 SERPINB10P48595 397 aa13.55□□□□□ -0.24
HDHD3-201ENST00000238379 CAMK2DQ13557 499 aa13.55□□□□□ -0.24
HDHD3-201ENST00000238379 THEM4Q5T1C6 240 aa13.55□□□□□ -0.24
HDHD3-201ENST00000238379 DMKNQ6E0U4 476 aaPredicted RBP13.55□□□□□ -0.24
HDHD3-201ENST00000238379 CREB3L2Q70SY1 520 aa13.55□□□□□ -0.24
HDHD3-201ENST00000238379 HDDC2Q7Z4H3 204 aa13.55□□□□□ -0.24
HDHD3-201ENST00000238379 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.55□□□□□ -0.24
HDHD3-201ENST00000238379 TMEM178AQ8NBL3 297 aa13.55□□□□□ -0.24
HDHD3-201ENST00000238379 NOXO1Q8NFA2 376 aa13.55□□□□□ -0.24
HDHD3-201ENST00000238379 SLC26A10Q8NG04 563 aa13.55□□□□□ -0.24
HDHD3-201ENST00000238379 OR2V1Q8NHB1 315 aa13.55□□□□□ -0.24
HDHD3-201ENST00000238379 OTOSQ8NHW6 89 aa13.55□□□□□ -0.24
HDHD3-201ENST00000238379 ZFAND2BQ8WV99 257 aa13.55□□□□□ -0.24
HDHD3-201ENST00000238379 DACH2Q96NX9 599 aa13.55□□□□□ -0.24
HDHD3-201ENST00000238379 RBP7Q96R05 134 aa13.55□□□□□ -0.24
HDHD3-201ENST00000238379 DCLRE1CQ96SD1 692 aaKnown RBP13.55□□□□□ -0.24
HDHD3-201ENST00000238379 TMED9Q9BVK6 235 aa13.55□□□□□ -0.24
HDHD3-201ENST00000238379 ACOXLQ9NUZ1 547 aa13.55□□□□□ -0.24
HDHD3-201ENST00000238379 LAMP5Q9UJQ1 280 aa13.55□□□□□ -0.24
HDHD3-201ENST00000238379 GNG8Q9UK08 70 aa13.55□□□□□ -0.24
HDHD3-201ENST00000238379 TMEM14AQ9Y6G1 99 aa13.55□□□□□ -0.24
HDHD3-201ENST00000238379 ZNF593O00488 134 aaPredicted RBP13.55□□□□□ -0.24
HDHD3-201ENST00000238379 DLL1O00548 723 aa13.55□□□□□ -0.24
HDHD3-201ENST00000238379 OGG1O15527 345 aa13.55□□□□□ -0.24
HDHD3-201ENST00000238379 KLK10O43240 276 aa13.55□□□□□ -0.24
HDHD3-201ENST00000238379 CXCL13O43927 109 aa13.55□□□□□ -0.24
HDHD3-201ENST00000238379 KHDRBS3O75525 346 aaKnown RBP13.55□□□□□ -0.24
HDHD3-201ENST00000238379 MPZL1O95297 269 aa13.55□□□□□ -0.24
HDHD3-201ENST00000238379 HLA-DPB1P04440 258 aa13.55□□□□□ -0.24
HDHD3-201ENST00000238379 CD53P19397 219 aa13.55□□□□□ -0.24
HDHD3-201ENST00000238379 GBX2P52951 348 aaPredicted RBP13.55□□□□□ -0.24
HDHD3-201ENST00000238379 PPIAP62937 165 aaKnown RBP13.55□□□□□ -0.24
HDHD3-201ENST00000238379 SIRPAP78324 504 aa13.55□□□□□ -0.24
HDHD3-201ENST00000238379 HIST3H3Q16695 136 aa13.55□□□□□ -0.24
HDHD3-201ENST00000238379 C22orf42Q6IC83 251 aa13.55□□□□□ -0.24
HDHD3-201ENST00000238379 ARL9Q6T311 187 aa13.55□□□□□ -0.24
HDHD3-201ENST00000238379 EGFL6Q8IUX8 553 aa13.55□□□□□ -0.24
HDHD3-201ENST00000238379 OR9K2Q8NGE7 335 aa13.55□□□□□ -0.24
HDHD3-201ENST00000238379 OR10D3Q8NH80 312 aa13.55□□□□□ -0.24
HDHD3-201ENST00000238379 RNF166Q96A37 237 aaPredicted RBP13.55□□□□□ -0.24
HDHD3-201ENST00000238379 COQ7Q99807 217 aa13.55□□□□□ -0.24
HDHD3-201ENST00000238379 QPCTLQ9NXS2 382 aa13.55□□□□□ -0.24
HDHD3-201ENST00000238379 KCNG2Q9UJ96 466 aa13.55□□□□□ -0.24
HDHD3-201ENST00000238379 ING1Q9UK53 422 aaPredicted RBP13.55□□□□□ -0.24
HDHD3-201ENST00000238379 ZNF726A6NNF4 738 aa13.54□□□□□ -0.24
HDHD3-201ENST00000238379 PSMD9O00233 223 aa13.54□□□□□ -0.24
HDHD3-201ENST00000238379 TLX3O43711 291 aaPredicted RBP13.54□□□□□ -0.24
HDHD3-201ENST00000238379 GAAP10253 952 aa13.54□□□□□ -0.24
HDHD3-201ENST00000238379 GALP22466 123 aa13.54□□□□□ -0.24
HDHD3-201ENST00000238379 EIF1AXP47813 144 aaKnown RBP13.54□□□□□ -0.24
HDHD3-201ENST00000238379 LHX2P50458 406 aa13.54□□□□□ -0.24
HDHD3-201ENST00000238379 CLDN17P56750 224 aa13.54□□□□□ -0.24
HDHD3-201ENST00000238379 CLRN1P58418 232 aa13.54□□□□□ -0.24
HDHD3-201ENST00000238379 MEP1BQ16820 701 aa13.54□□□□□ -0.24
HDHD3-201ENST00000238379 PLEKHG7Q6ZR37 379 aa13.54□□□□□ -0.24
HDHD3-201ENST00000238379 TRILQ7L0X0 811 aa13.54□□□□□ -0.24
HDHD3-201ENST00000238379 KCTD20Q7Z5Y7 419 aa13.54□□□□□ -0.24
HDHD3-201ENST00000238379 ZIC4Q8N9L1 334 aa13.54□□□□□ -0.24
HDHD3-201ENST00000238379 PGLYRP3Q96LB9 341 aa13.54□□□□□ -0.24
HDHD3-201ENST00000238379 ZNF385AQ96PM9 386 aaKnown RBP13.54□□□□□ -0.24
HDHD3-201ENST00000238379 SCNM1Q9BWG6 230 aa13.54□□□□□ -0.24
HDHD3-201ENST00000238379 SF3B5Q9BWJ5 86 aaKnown RBP13.54□□□□□ -0.24
HDHD3-201ENST00000238379 HDHD5Q9BXW7 423 aa13.54□□□□□ -0.24
HDHD3-201ENST00000238379 SLC6A15Q9H2J7 730 aa13.54□□□□□ -0.24
HDHD3-201ENST00000238379 KLHL9Q9P2J3 617 aa13.54□□□□□ -0.24
HDHD3-201ENST00000238379 MRM2Q9UI43 246 aaKnown RBP13.54□□□□□ -0.24
HDHD3-201ENST00000238379 WASF3Q9UPY6 502 aa13.54□□□□□ -0.24
HDHD3-201ENST00000238379 GABRPO00591 440 aa13.53□□□□□ -0.24
HDHD3-201ENST00000238379 SULT1C4O75897 302 aa13.53□□□□□ -0.24
HDHD3-201ENST00000238379 ABHD16AO95870 558 aa13.53□□□□□ -0.24
HDHD3-201ENST00000238379 OR8G3PP0DMU2 310 aa13.53□□□□□ -0.24
HDHD3-201ENST00000238379 SDHBP21912 280 aa13.53□□□□□ -0.24
HDHD3-201ENST00000238379 ENTPD1P49961 510 aa13.53□□□□□ -0.24
HDHD3-201ENST00000238379 ADAM8P78325 824 aa13.53□□□□□ -0.24
HDHD3-201ENST00000238379 SLC3A1Q07837 685 aa13.53□□□□□ -0.24
HDHD3-201ENST00000238379 INSL4Q14641 139 aa13.53□□□□□ -0.24
HDHD3-201ENST00000238379 CCDC58Q4VC31 144 aa13.53□□□□□ -0.24
HDHD3-201ENST00000238379 CARD17Q5XLA6 110 aa13.53□□□□□ -0.24
HDHD3-201ENST00000238379 TMEM91Q6ZNR0 172 aa13.53□□□□□ -0.24
HDHD3-201ENST00000238379 SLC22A16Q86VW1 577 aa13.53□□□□□ -0.24
HDHD3-201ENST00000238379 THEM6Q8WUY1 208 aa13.53□□□□□ -0.24
HDHD3-201ENST00000238379 AMELYQ99218 206 aa13.53□□□□□ -0.24
HDHD3-201ENST00000238379 SIAEQ9HAT2 523 aa13.53□□□□□ -0.24
HDHD3-201ENST00000238379 ACKR4Q9NPB9 350 aa13.53□□□□□ -0.24
HDHD3-201ENST00000238379 KIAA1549Q9HCM3 1950 aa13.53□□□□□ -0.24
HDHD3-201ENST00000238379 METTL15A6NJ78 407 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms