RNA–Protein interactions for RNA: ENST00000640036.1

SCN1A-218, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN1A, Length 8,131 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-218ENST00000640036 MROH6A6NGR9 719 aa4.6□□□□□ -1.67
SCN1A-218ENST00000640036 SP1P08047 785 aa4.6□□□□□ -1.67
SCN1A-218ENST00000640036 EPXP11678 715 aa4.6□□□□□ -1.67
SCN1A-218ENST00000640036 LCN1P31025 176 aa4.6□□□□□ -1.67
SCN1A-218ENST00000640036 PRKAR1BP31321 381 aa4.6□□□□□ -1.67
SCN1A-218ENST00000640036 CLDN8P56748 225 aa4.6□□□□□ -1.67
SCN1A-218ENST00000640036 NRF1Q16656 503 aa4.6□□□□□ -1.67
SCN1A-218ENST00000640036 TRIM46Q7Z4K8 759 aa4.6□□□□□ -1.67
SCN1A-218ENST00000640036 SNRNP27Q8WVK2 155 aaKnown RBP4.6□□□□□ -1.67
SCN1A-218ENST00000640036 COPS9Q8WXC6 57 aa4.6□□□□□ -1.67
SCN1A-218ENST00000640036 ACOT11Q8WXI4 607 aaPredicted RBP4.6□□□□□ -1.67
SCN1A-218ENST00000640036 WDR37Q9Y2I8 494 aa4.6□□□□□ -1.67
SCN1A-218ENST00000640036 J3QRK9 145 aa4.59□□□□□ -1.67
SCN1A-218ENST00000640036 CHEK1O14757 476 aa4.59□□□□□ -1.67
SCN1A-218ENST00000640036 CD79BP40259 229 aa4.59□□□□□ -1.67
SCN1A-218ENST00000640036 LUMP51884 338 aaPredicted RBP4.59□□□□□ -1.67
SCN1A-218ENST00000640036 PFN3P60673 137 aa4.59□□□□□ -1.67
SCN1A-218ENST00000640036 DEFA5Q01523 94 aa4.59□□□□□ -1.67
SCN1A-218ENST00000640036 RABL3Q5HYI8 236 aa4.59□□□□□ -1.67
SCN1A-218ENST00000640036 LINGO2Q7L985 606 aa4.59□□□□□ -1.67
SCN1A-218ENST00000640036 TIPARPQ7Z3E1 657 aaKnown RBP4.59□□□□□ -1.67
SCN1A-218ENST00000640036 OR5AS1Q8N127 324 aa4.59□□□□□ -1.67
SCN1A-218ENST00000640036 OR1J1Q8NGS3 322 aa4.59□□□□□ -1.67
SCN1A-218ENST00000640036 OR1L3Q8NH93 324 aa4.59□□□□□ -1.67
SCN1A-218ENST00000640036 PTPMT1Q8WUK0 201 aaPredicted RBP4.59□□□□□ -1.67
SCN1A-218ENST00000640036 TSLPQ969D9 159 aa4.59□□□□□ -1.67
SCN1A-218ENST00000640036 TMEM208Q9BTX3 173 aa4.59□□□□□ -1.67
SCN1A-218ENST00000640036 ALG8Q9BVK2 526 aa4.59□□□□□ -1.67
SCN1A-218ENST00000640036 DGCR6LQ9BY27 220 aa4.59□□□□□ -1.67
SCN1A-218ENST00000640036 TREM1Q9NP99 234 aa4.59□□□□□ -1.67
SCN1A-218ENST00000640036 BIN3Q9NQY0 253 aa4.59□□□□□ -1.67
SCN1A-218ENST00000640036 FETUBQ9UGM5 382 aa4.59□□□□□ -1.67
SCN1A-218ENST00000640036 AK6Q9Y3D8 172 aaKnown RBP4.59□□□□□ -1.67
SCN1A-218ENST00000640036 RNF115Q9Y4L5 304 aa4.59□□□□□ -1.67
SCN1A-218ENST00000640036 ZNF462Q96JM2 2506 aa4.59□□□□□ -1.67
SCN1A-218ENST00000640036 C1orf196B1AJZ1 125 aa4.59□□□□□ -1.67
SCN1A-218ENST00000640036 KDM4EB2RXH2 506 aaPredicted RBP4.59□□□□□ -1.67
SCN1A-218ENST00000640036 DOK2O60496 412 aa4.59□□□□□ -1.67
SCN1A-218ENST00000640036 FRKP42685 505 aaPredicted RBP4.59□□□□□ -1.67
SCN1A-218ENST00000640036 ZNF140P52738 457 aaPredicted RBP4.59□□□□□ -1.67
SCN1A-218ENST00000640036 TAS2R20P59543 309 aa4.59□□□□□ -1.67
SCN1A-218ENST00000640036 DNAJB13P59910 316 aa4.59□□□□□ -1.67
SCN1A-218ENST00000640036 TMEM69Q5SWH9 247 aa4.59□□□□□ -1.67
SCN1A-218ENST00000640036 ZNF678Q5SXM1 525 aa4.59□□□□□ -1.67
SCN1A-218ENST00000640036 UCK1Q9HA47 277 aa4.59□□□□□ -1.67
SCN1A-218ENST00000640036 SAP30LQ9HAJ7 183 aa4.59□□□□□ -1.67
SCN1A-218ENST00000640036 SIX2Q9NPC8 291 aa4.59□□□□□ -1.67
SCN1A-218ENST00000640036 SLC22A11Q9NSA0 550 aa4.59□□□□□ -1.67
SCN1A-218ENST00000640036 SMOXQ9NWM0 555 aa4.59□□□□□ -1.67
SCN1A-218ENST00000640036 FBXO34Q9NWN3 711 aa4.59□□□□□ -1.67
SCN1A-218ENST00000640036 HIF1ANQ9NWT6 349 aa4.59□□□□□ -1.67
SCN1A-218ENST00000640036 VSX1Q9NZR4 365 aaPredicted RBP4.59□□□□□ -1.67
SCN1A-218ENST00000640036 ZNF207O43670 478 aaKnown RBP4.59□□□□□ -1.67
SCN1A-218ENST00000640036 B4GALT3O60512 393 aa4.59□□□□□ -1.67
SCN1A-218ENST00000640036 SLC16A7O60669 478 aa4.59□□□□□ -1.67
SCN1A-218ENST00000640036 CISD3P0C7P0 127 aa4.59□□□□□ -1.67
SCN1A-218ENST00000640036 OR5H8P0DN80 308 aa4.59□□□□□ -1.67
SCN1A-218ENST00000640036 GLRA1P23415 457 aa4.59□□□□□ -1.67
SCN1A-218ENST00000640036 CRHBPP24387 322 aa4.59□□□□□ -1.67
SCN1A-218ENST00000640036 SRD5A2P31213 254 aa4.59□□□□□ -1.67
SCN1A-218ENST00000640036 GSK3AP49840 483 aa4.59□□□□□ -1.67
SCN1A-218ENST00000640036 GZMKP49863 264 aa4.59□□□□□ -1.67
SCN1A-218ENST00000640036 PPT1P50897 306 aa4.59□□□□□ -1.67
SCN1A-218ENST00000640036 GSCP56915 257 aaPredicted RBP4.59□□□□□ -1.67
SCN1A-218ENST00000640036 HTD2P86397 168 aa4.59□□□□□ -1.67
SCN1A-218ENST00000640036 CRMP1Q14194 572 aa4.59□□□□□ -1.67
SCN1A-218ENST00000640036 KCNJ11Q14654 390 aa4.59□□□□□ -1.67
SCN1A-218ENST00000640036 MICBQ29980 383 aa4.59□□□□□ -1.67
SCN1A-218ENST00000640036 TMEM244Q5VVB8 128 aa4.59□□□□□ -1.67
SCN1A-218ENST00000640036 BLOC1S3Q6QNY0 202 aa4.59□□□□□ -1.67
SCN1A-218ENST00000640036 MARCH3Q86UD3 253 aa4.59□□□□□ -1.67
SCN1A-218ENST00000640036 OR13G1Q8NGZ3 307 aa4.59□□□□□ -1.67
SCN1A-218ENST00000640036 LIPHQ8WWY8 451 aa4.59□□□□□ -1.67
SCN1A-218ENST00000640036 KCTD7Q96MP8 289 aa4.59□□□□□ -1.67
SCN1A-218ENST00000640036 TUBA4BQ9H853 241 aa4.59□□□□□ -1.67
SCN1A-218ENST00000640036 HRASLSQ9HDD0 168 aa4.59□□□□□ -1.67
SCN1A-218ENST00000640036 PLEKHJ1Q9NW61 149 aa4.59□□□□□ -1.67
SCN1A-218ENST00000640036 TRBV23-1A0A0A0MS06 115 aa4.59□□□□□ -1.67
SCN1A-218ENST00000640036 SGCEO43556 437 aa4.59□□□□□ -1.67
SCN1A-218ENST00000640036 CRYZL1O95825 349 aa4.59□□□□□ -1.67
SCN1A-218ENST00000640036 MT-ATP6P00846 226 aa4.59□□□□□ -1.67
SCN1A-218ENST00000640036 ADRB1P08588 477 aa4.59□□□□□ -1.67
SCN1A-218ENST00000640036 CD1DP15813 335 aa4.59□□□□□ -1.67
SCN1A-218ENST00000640036 SOX3P41225 446 aa4.59□□□□□ -1.67
SCN1A-218ENST00000640036 NBL1P41271 181 aa4.59□□□□□ -1.67
SCN1A-218ENST00000640036 LIMK1P53667 647 aa4.59□□□□□ -1.67
SCN1A-218ENST00000640036 TNFAIP6P98066 277 aaPredicted RBP4.59□□□□□ -1.67
SCN1A-218ENST00000640036 TMEM267Q0VDI3 215 aaPredicted RBP4.59□□□□□ -1.67
SCN1A-218ENST00000640036 DYRK1AQ13627 763 aa4.59□□□□□ -1.67
SCN1A-218ENST00000640036 ATP6AP1Q15904 470 aa4.59□□□□□ -1.67
SCN1A-218ENST00000640036 NTRK2Q16620 822 aa4.59□□□□□ -1.67
SCN1A-218ENST00000640036 ARHGAP11BQ3KRB8 267 aa4.59□□□□□ -1.67
SCN1A-218ENST00000640036 ZNF781Q8N8C0 355 aa4.59□□□□□ -1.67
SCN1A-218ENST00000640036 OR7G2Q8NG99 324 aa4.59□□□□□ -1.67
SCN1A-218ENST00000640036 INTS14Q96SY0 518 aa4.59□□□□□ -1.67
SCN1A-218ENST00000640036 S1PR3Q99500 378 aa4.59□□□□□ -1.67
SCN1A-218ENST00000640036 NT5DC2Q9H857 520 aa4.59□□□□□ -1.67
SCN1A-218ENST00000640036 DAPP1Q9UN19 280 aa4.59□□□□□ -1.67
SCN1A-218ENST00000640036 UBE2J1Q9Y385 318 aaPredicted RBP4.59□□□□□ -1.67
SCN1A-218ENST00000640036 TIMM10BQ9Y5J6 103 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms