RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 HCRTR2O43614 444 aa10.45□□□□□ -0.74
CLN6-217ENST00000636964 NUDT14O95848 222 aa10.45□□□□□ -0.74
CLN6-217ENST00000636964 HRGP04196 525 aa10.45□□□□□ -0.74
CLN6-217ENST00000636964 GBX2P52951 348 aaPredicted RBP10.45□□□□□ -0.74
CLN6-217ENST00000636964 SKP2Q13309 424 aa10.45□□□□□ -0.74
CLN6-217ENST00000636964 PLA1AQ53H76 456 aa10.45□□□□□ -0.74
CLN6-217ENST00000636964 FNDC7Q5VTL7 733 aa10.45□□□□□ -0.74
CLN6-217ENST00000636964 LINC00114Q6XXX2 140 aa10.45□□□□□ -0.74
CLN6-217ENST00000636964 RTL4Q6ZR62 310 aa10.45□□□□□ -0.74
CLN6-217ENST00000636964 ANKRD37Q7Z713 158 aa10.45□□□□□ -0.74
CLN6-217ENST00000636964 SLITRK4Q8IW52 837 aa10.45□□□□□ -0.74
CLN6-217ENST00000636964 ZNF563Q8TA94 476 aa10.45□□□□□ -0.74
CLN6-217ENST00000636964 OR51V1Q9H2C8 321 aa10.45□□□□□ -0.74
CLN6-217ENST00000636964 FBXL4Q9UKA2 621 aa10.45□□□□□ -0.74
CLN6-217ENST00000636964 SSR3Q9UNL2 185 aa10.45□□□□□ -0.74
CLN6-217ENST00000636964 ORC5O43913 435 aa10.45□□□□□ -0.74
CLN6-217ENST00000636964 GYPBP06028 91 aa10.45□□□□□ -0.74
CLN6-217ENST00000636964 EMP2P54851 167 aa10.45□□□□□ -0.74
CLN6-217ENST00000636964 TSPAN5P62079 268 aa10.45□□□□□ -0.74
CLN6-217ENST00000636964 GPR176Q14439 515 aa10.45□□□□□ -0.74
CLN6-217ENST00000636964 INSL4Q14641 139 aa10.45□□□□□ -0.74
CLN6-217ENST00000636964 TOMM34Q15785 309 aaPredicted RBP10.45□□□□□ -0.74
CLN6-217ENST00000636964 TRIQKQ629K1 86 aa10.45□□□□□ -0.74
CLN6-217ENST00000636964 OR5M10Q6IEU7 315 aa10.45□□□□□ -0.74
CLN6-217ENST00000636964 NUP54Q7Z3B4 507 aa10.45□□□□□ -0.74
CLN6-217ENST00000636964 MS4A15Q8N5U1 240 aa10.45□□□□□ -0.74
CLN6-217ENST00000636964 C19orf18Q8NEA5 215 aa10.45□□□□□ -0.74
CLN6-217ENST00000636964 SMAP2Q8WU79 429 aaPredicted RBP10.45□□□□□ -0.74
CLN6-217ENST00000636964 METTL21AQ8WXB1 218 aa10.45□□□□□ -0.74
CLN6-217ENST00000636964 UFD1Q92890 307 aa10.45□□□□□ -0.74
CLN6-217ENST00000636964 SGTBQ96EQ0 304 aa10.45□□□□□ -0.74
CLN6-217ENST00000636964 MND1Q9BWT6 205 aa10.45□□□□□ -0.74
CLN6-217ENST00000636964 MRTO4Q9UKD2 239 aaKnown RBP10.45□□□□□ -0.74
CLN6-217ENST00000636964 FAM186AA6NE01 2351 aa10.45□□□□□ -0.74
CLN6-217ENST00000636964 CACNA1CQ13936 2221 aa10.44□□□□□ -0.74
CLN6-217ENST00000636964 NUP210LQ5VU65 1888 aa10.44□□□□□ -0.74
CLN6-217ENST00000636964 A0A087WUJ7 227 aa10.44□□□□□ -0.74
CLN6-217ENST00000636964 ELOA3DA6NLF2 546 aaPredicted RBP10.44□□□□□ -0.74
CLN6-217ENST00000636964 D6RAR5 112 aa10.44□□□□□ -0.74
CLN6-217ENST00000636964 ZNF354AO60765 605 aaPredicted RBP10.44□□□□□ -0.74
CLN6-217ENST00000636964 ALOX12BO75342 701 aa10.44□□□□□ -0.74
CLN6-217ENST00000636964 WISP1O95388 367 aa10.44□□□□□ -0.74
CLN6-217ENST00000636964 SP9P0CG40 484 aa10.44□□□□□ -0.74
CLN6-217ENST00000636964 RAD52P43351 418 aa10.44□□□□□ -0.74
CLN6-217ENST00000636964 GPR143P51810 404 aa10.44□□□□□ -0.74
CLN6-217ENST00000636964 ZNF117Q03924 483 aa10.44□□□□□ -0.74
CLN6-217ENST00000636964 FHL1Q13642 323 aa10.44□□□□□ -0.74
CLN6-217ENST00000636964 ELOA3BQ3SY89 546 aa10.44□□□□□ -0.74
CLN6-217ENST00000636964 LRFN4Q6PJG9 635 aa10.44□□□□□ -0.74
CLN6-217ENST00000636964 TFAP2EQ6VUC0 442 aa10.44□□□□□ -0.74
CLN6-217ENST00000636964 STPG2Q8N412 459 aa10.44□□□□□ -0.74
CLN6-217ENST00000636964 ZFP41Q8N8Y5 198 aa10.44□□□□□ -0.74
CLN6-217ENST00000636964 ELOA3Q8NG57 546 aa10.44□□□□□ -0.74
CLN6-217ENST00000636964 OR51G2Q8NGK0 314 aa10.44□□□□□ -0.74
CLN6-217ENST00000636964 OR6M1Q8NGM8 313 aa10.44□□□□□ -0.74
CLN6-217ENST00000636964 PTP4A1Q93096 173 aa10.44□□□□□ -0.74
CLN6-217ENST00000636964 TBX5Q99593 518 aa10.44□□□□□ -0.74
CLN6-217ENST00000636964 TGIF2Q9GZN2 237 aa10.44□□□□□ -0.74
CLN6-217ENST00000636964 DVL2O14641 736 aa10.44□□□□□ -0.74
CLN6-217ENST00000636964 SCGB1D2O95969 90 aa10.44□□□□□ -0.74
CLN6-217ENST00000636964 MST1P26927 711 aa10.44□□□□□ -0.74
CLN6-217ENST00000636964 SLC6A1P30531 599 aa10.44□□□□□ -0.74
CLN6-217ENST00000636964 EVX1P49640 407 aa10.44□□□□□ -0.74
CLN6-217ENST00000636964 RPS7P62081 194 aaKnown RBP10.44□□□□□ -0.74
CLN6-217ENST00000636964 RAB40BQ12829 278 aa10.44□□□□□ -0.74
CLN6-217ENST00000636964 BAMBIQ13145 260 aa10.44□□□□□ -0.74
CLN6-217ENST00000636964 SWI5Q1ZZU3 235 aa10.44□□□□□ -0.74
CLN6-217ENST00000636964 OVCH1Q7RTY7 1134 aa10.44□□□□□ -0.74
CLN6-217ENST00000636964 ZNF227Q86WZ6 799 aa10.44□□□□□ -0.74
CLN6-217ENST00000636964 ATF6BQ99941 703 aa10.44□□□□□ -0.74
CLN6-217ENST00000636964 TBL1XR1Q9BZK7 514 aa10.44□□□□□ -0.74
CLN6-217ENST00000636964 FBXO4Q9UKT5 387 aa10.44□□□□□ -0.74
CLN6-217ENST00000636964 IGLV3-12A0A075B6K2 115 aa10.43□□□□□ -0.74
CLN6-217ENST00000636964 SLC22A23A1A5C7 686 aa10.43□□□□□ -0.74
CLN6-217ENST00000636964 TSPAN2O60636 221 aa10.43□□□□□ -0.74
CLN6-217ENST00000636964 MPLP40238 635 aa10.43□□□□□ -0.74
CLN6-217ENST00000636964 RBM34P42696 430 aaKnown RBP10.43□□□□□ -0.74
CLN6-217ENST00000636964 FABP5Q01469 135 aa10.43□□□□□ -0.74
CLN6-217ENST00000636964 MLLT11Q13015 90 aaPredicted RBP10.43□□□□□ -0.74
CLN6-217ENST00000636964 SF3A2Q15428 464 aaKnown RBP10.43□□□□□ -0.74
CLN6-217ENST00000636964 COL28A1Q2UY09 1125 aa10.43□□□□□ -0.74
CLN6-217ENST00000636964 CRTC2Q53ET0 693 aaPredicted RBP10.43□□□□□ -0.74
CLN6-217ENST00000636964 PAPD4Q6PIY7 484 aaKnown RBP10.43□□□□□ -0.74
CLN6-217ENST00000636964 APCDD1LQ8NCL9 501 aa10.43□□□□□ -0.74
CLN6-217ENST00000636964 PROKR2Q8NFJ6 384 aa10.43□□□□□ -0.74
CLN6-217ENST00000636964 RFKQ969G6 155 aa10.43□□□□□ -0.74
CLN6-217ENST00000636964 ERMAPQ96PL5 475 aaPredicted RBP10.43□□□□□ -0.74
CLN6-217ENST00000636964 SSX3Q99909 188 aa10.43□□□□□ -0.74
CLN6-217ENST00000636964 CRB3Q9BUF7 120 aa10.43□□□□□ -0.74
CLN6-217ENST00000636964 ADAM18Q9Y3Q7 739 aa10.43□□□□□ -0.74
CLN6-217ENST00000636964 MCIDASD6RGH6 385 aa10.43□□□□□ -0.74
CLN6-217ENST00000636964 RPL4P36578 427 aaKnown RBP10.43□□□□□ -0.74
CLN6-217ENST00000636964 DCAF7P61962 342 aa10.43□□□□□ -0.74
CLN6-217ENST00000636964 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.43□□□□□ -0.74
CLN6-217ENST00000636964 CAMK2DQ13557 499 aa10.43□□□□□ -0.74
CLN6-217ENST00000636964 IL18Q14116 193 aa10.43□□□□□ -0.74
CLN6-217ENST00000636964 CRMP1Q14194 572 aa10.43□□□□□ -0.74
CLN6-217ENST00000636964 TMEM44Q2T9K0 475 aa10.43□□□□□ -0.74
CLN6-217ENST00000636964 ZNF385CQ66K41 422 aaPredicted RBP10.43□□□□□ -0.74
CLN6-217ENST00000636964 WBP2NLQ6ICG8 309 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms