RNA–Protein interactions for RNA: ENST00000626948.2

SOX2-OT-241, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 836 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-241ENST00000626948 TSPAN19P0C672 248 aa11.59□□□□□ -0.55
SOX2-OT-241ENST00000626948 FUT1P19526 365 aa11.59□□□□□ -0.55
SOX2-OT-241ENST00000626948 CDH15P55291 814 aa11.59□□□□□ -0.55
SOX2-OT-241ENST00000626948 MYBPC1Q00872 1141 aa11.59□□□□□ -0.55
SOX2-OT-241ENST00000626948 RPL18Q07020 188 aaKnown RBP11.59□□□□□ -0.55
SOX2-OT-241ENST00000626948 CCNIQ14094 377 aa11.59□□□□□ -0.55
SOX2-OT-241ENST00000626948 TTC33Q6PID6 262 aaPredicted RBP11.59□□□□□ -0.55
SOX2-OT-241ENST00000626948 PATL1Q86TB9 770 aaKnown RBP11.59□□□□□ -0.55
SOX2-OT-241ENST00000626948 ZNF540Q8NDQ6 660 aa11.59□□□□□ -0.55
SOX2-OT-241ENST00000626948 TMEM255BQ8WV15 326 aa11.59□□□□□ -0.55
SOX2-OT-241ENST00000626948 DYDC1Q8WWB3 177 aa11.59□□□□□ -0.55
SOX2-OT-241ENST00000626948 GTF3AQ92664 365 aaKnown RBP11.59□□□□□ -0.55
SOX2-OT-241ENST00000626948 MCHR2Q969V1 340 aa11.59□□□□□ -0.55
SOX2-OT-241ENST00000626948 NMD3Q96D46 503 aaKnown RBP11.59□□□□□ -0.55
SOX2-OT-241ENST00000626948 SLC25A44Q96H78 314 aaPredicted RBP11.59□□□□□ -0.55
SOX2-OT-241ENST00000626948 C19orf24Q9BVV8 132 aa11.59□□□□□ -0.55
SOX2-OT-241ENST00000626948 B3GAT2Q9NPZ5 323 aa11.59□□□□□ -0.55
SOX2-OT-241ENST00000626948 NANSQ9NR45 359 aa11.59□□□□□ -0.55
SOX2-OT-241ENST00000626948 REV1Q9UBZ9 1251 aa11.59□□□□□ -0.55
SOX2-OT-241ENST00000626948 ZNF229Q9UJW7 825 aa11.59□□□□□ -0.55
SOX2-OT-241ENST00000626948 SLC13A4Q9UKG4 626 aa11.59□□□□□ -0.55
SOX2-OT-241ENST00000626948 TENM1Q9UKZ4 2725 aa11.59□□□□□ -0.55
SOX2-OT-241ENST00000626948 A0A0G2JND7 137 aa11.58□□□□□ -0.56
SOX2-OT-241ENST00000626948 HMGB1P1B2RPK0 211 aaPredicted RBP11.58□□□□□ -0.56
SOX2-OT-241ENST00000626948 FAM157AC9JC47 383 aa11.58□□□□□ -0.56
SOX2-OT-241ENST00000626948 M0R233 179 aa11.58□□□□□ -0.56
SOX2-OT-241ENST00000626948 RNF13O43567 381 aa11.58□□□□□ -0.56
SOX2-OT-241ENST00000626948 UBL3O95164 117 aa11.58□□□□□ -0.56
SOX2-OT-241ENST00000626948 MMP7P09237 267 aaPredicted RBP11.58□□□□□ -0.56
SOX2-OT-241ENST00000626948 QDPRP09417 244 aa11.58□□□□□ -0.56
SOX2-OT-241ENST00000626948 FAM157BP0CG42 384 aa11.58□□□□□ -0.56
SOX2-OT-241ENST00000626948 NAT2P11245 290 aa11.58□□□□□ -0.56
SOX2-OT-241ENST00000626948 H2AFXP16104 143 aaPredicted RBP11.58□□□□□ -0.56
SOX2-OT-241ENST00000626948 APEX1P27695 318 aaKnown RBP11.58□□□□□ -0.56
SOX2-OT-241ENST00000626948 MAGEB1P43366 347 aa11.58□□□□□ -0.56
SOX2-OT-241ENST00000626948 ZNF133P52736 654 aaPredicted RBP11.58□□□□□ -0.56
SOX2-OT-241ENST00000626948 CHN2P52757 468 aa11.58□□□□□ -0.56
SOX2-OT-241ENST00000626948 SF3A3Q12874 501 aaKnown RBP eCLIP11.58□□□□□ -0.565e-10■□□□□ 9.3
SOX2-OT-241ENST00000626948 HNRNPA0Q13151 305 aaKnown RBP11.58□□□□□ -0.56
SOX2-OT-241ENST00000626948 PIN1Q13526 163 aaPredicted RBP11.58□□□□□ -0.56
SOX2-OT-241ENST00000626948 TRMT5Q32P41 509 aaKnown RBP11.58□□□□□ -0.56
SOX2-OT-241ENST00000626948 ALKBH6Q3KRA9 238 aa11.58□□□□□ -0.56
SOX2-OT-241ENST00000626948 OR4K5Q8NGD3 323 aa11.58□□□□□ -0.56
SOX2-OT-241ENST00000626948 MOSPD2Q8NHP6 518 aa11.58□□□□□ -0.56
SOX2-OT-241ENST00000626948 CLDND2Q8NHS1 167 aa11.58□□□□□ -0.56
SOX2-OT-241ENST00000626948 ASB10Q8WXI3 467 aa11.58□□□□□ -0.56
SOX2-OT-241ENST00000626948 ZNF566Q969W8 418 aa11.58□□□□□ -0.56
SOX2-OT-241ENST00000626948 ZNF583Q96ND8 569 aa11.58□□□□□ -0.56
SOX2-OT-241ENST00000626948 TMEM120AQ9BXJ8 343 aa11.58□□□□□ -0.56
SOX2-OT-241ENST00000626948 DENND2DQ9H6A0 471 aaPredicted RBP11.58□□□□□ -0.56
SOX2-OT-241ENST00000626948 UGT2A1Q9Y4X1 527 aa11.58□□□□□ -0.56
SOX2-OT-241ENST00000626948 IGLV3-9A0A075B6K5 115 aa11.57□□□□□ -0.56
SOX2-OT-241ENST00000626948 BLOC1S5-TXNDC5H3BN57 136 aa11.57□□□□□ -0.56
SOX2-OT-241ENST00000626948 PIP5K1CO60331 668 aa11.57□□□□□ -0.56
SOX2-OT-241ENST00000626948 TRMUO75648 421 aaKnown RBP11.57□□□□□ -0.56
SOX2-OT-241ENST00000626948 RAB36O95755 333 aa11.57□□□□□ -0.56
SOX2-OT-241ENST00000626948 MT-ND1P03886 318 aa11.57□□□□□ -0.56
SOX2-OT-241ENST00000626948 OR8G3PP0DMU2 310 aa11.57□□□□□ -0.56
SOX2-OT-241ENST00000626948 AQP2P41181 271 aa11.57□□□□□ -0.56
SOX2-OT-241ENST00000626948 OR1E2P47887 323 aa11.57□□□□□ -0.56
SOX2-OT-241ENST00000626948 FHL1Q13642 323 aa11.57□□□□□ -0.56
SOX2-OT-241ENST00000626948 ARMC4Q5T2S8 1044 aa11.57□□□□□ -0.56
SOX2-OT-241ENST00000626948 CLDN22Q8N7P3 220 aa11.57□□□□□ -0.56
SOX2-OT-241ENST00000626948 LINC01356Q8N9X3 169 aa11.57□□□□□ -0.56
SOX2-OT-241ENST00000626948 SYT14Q8NB59 555 aa11.57□□□□□ -0.56
SOX2-OT-241ENST00000626948 CPEB3Q8NE35 698 aaKnown RBP11.57□□□□□ -0.56
SOX2-OT-241ENST00000626948 HDAC2Q92769 488 aaKnown RBP11.57□□□□□ -0.56
SOX2-OT-241ENST00000626948 HPS1Q92902 700 aa11.57□□□□□ -0.56
SOX2-OT-241ENST00000626948 NABP1Q96AH0 204 aa11.57□□□□□ -0.56
SOX2-OT-241ENST00000626948 LRRC58Q96CX6 371 aa11.57□□□□□ -0.56
SOX2-OT-241ENST00000626948 MPP4Q96JB8 637 aa11.57□□□□□ -0.56
SOX2-OT-241ENST00000626948 SLC19A3Q9BZV2 496 aa11.57□□□□□ -0.56
SOX2-OT-241ENST00000626948 OR51B6Q9H340 312 aa11.57□□□□□ -0.56
SOX2-OT-241ENST00000626948 ZNF275Q9NSD4 429 aaPredicted RBP11.57□□□□□ -0.56
SOX2-OT-241ENST00000626948 FBXO9Q9UK97 447 aaPredicted RBP11.57□□□□□ -0.56
SOX2-OT-241ENST00000626948 TRIM33Q9UPN9 1127 aa11.57□□□□□ -0.56
SOX2-OT-241ENST00000626948 SH3GLB1Q9Y371 365 aa11.57□□□□□ -0.56
SOX2-OT-241ENST00000626948 NBEAL1Q6ZS30 2694 aa11.57□□□□□ -0.56
SOX2-OT-241ENST00000626948 MGRN1O60291 552 aa11.56□□□□□ -0.56
SOX2-OT-241ENST00000626948 OR7A10O76100 309 aa11.56□□□□□ -0.56
SOX2-OT-241ENST00000626948 OR6A2O95222 327 aa11.56□□□□□ -0.56
SOX2-OT-241ENST00000626948 SLC2A10O95528 541 aa11.56□□□□□ -0.56
SOX2-OT-241ENST00000626948 BCL10O95999 233 aa11.56□□□□□ -0.56
SOX2-OT-241ENST00000626948 CDAP32320 146 aa11.56□□□□□ -0.56
SOX2-OT-241ENST00000626948 RBMXP38159 391 aaKnown RBP11.56□□□□□ -0.56
SOX2-OT-241ENST00000626948 LMO4P61968 165 aa11.56□□□□□ -0.56
SOX2-OT-241ENST00000626948 FMODQ06828 376 aa11.56□□□□□ -0.56
SOX2-OT-241ENST00000626948 LAPTM4AQ15012 233 aa11.56□□□□□ -0.56
SOX2-OT-241ENST00000626948 REP15Q6BDI9 236 aa11.56□□□□□ -0.56
SOX2-OT-241ENST00000626948 SLC30A8Q8IWU4 369 aa11.56□□□□□ -0.56
SOX2-OT-241ENST00000626948 SLC30A7Q8NEW0 376 aa11.56□□□□□ -0.56
SOX2-OT-241ENST00000626948 NOXO1Q8NFA2 376 aa11.56□□□□□ -0.56
SOX2-OT-241ENST00000626948 LIPHQ8WWY8 451 aa11.56□□□□□ -0.56
SOX2-OT-241ENST00000626948 NARFLQ9H6Q4 476 aa11.56□□□□□ -0.56
SOX2-OT-241ENST00000626948 SLC7A8Q9UHI5 535 aa11.56□□□□□ -0.56
SOX2-OT-241ENST00000626948 DUSP13Q9UII6 198 aa11.56□□□□□ -0.56
SOX2-OT-241ENST00000626948 TMEFF2Q9UIK5 374 aaPredicted RBP11.56□□□□□ -0.56
SOX2-OT-241ENST00000626948 RIMS3Q9UJD0 308 aa11.56□□□□□ -0.56
SOX2-OT-241ENST00000626948 VSTM5A8MXK1 200 aa11.55□□□□□ -0.56
SOX2-OT-241ENST00000626948 UMPSP11172 480 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms