RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 POLR2J2Q9GZM3 115 aaKnown RBP10.52□□□□□ -0.73
LINC00538-201ENST00000626109 RNF167Q9H6Y7 350 aa10.52□□□□□ -0.73
LINC00538-201ENST00000626109 METTL8Q9H825 291 aaKnown RBP10.52□□□□□ -0.73
LINC00538-201ENST00000626109 DDX31Q9H8H2 851 aaKnown RBP10.52□□□□□ -0.73
LINC00538-201ENST00000626109 B3GALT1Q9Y5Z6 326 aa10.52□□□□□ -0.73
LINC00538-201ENST00000626109 MDC1Q14676 2089 aaKnown RBP10.51□□□□□ -0.73
LINC00538-201ENST00000626109 A0A0B4J293 547 aa10.51□□□□□ -0.73
LINC00538-201ENST00000626109 A0A1B0GX78 115 aa10.51□□□□□ -0.73
LINC00538-201ENST00000626109 A0A1W2PNU3 283 aaPredicted RBP10.51□□□□□ -0.73
LINC00538-201ENST00000626109 C4orf51C9J302 202 aa10.51□□□□□ -0.73
LINC00538-201ENST00000626109 RGS5O15539 181 aa10.51□□□□□ -0.73
LINC00538-201ENST00000626109 TNFSF15O95150 251 aa10.51□□□□□ -0.73
LINC00538-201ENST00000626109 RAB36O95755 333 aa10.51□□□□□ -0.73
LINC00538-201ENST00000626109 CELA3BP08861 270 aa10.51□□□□□ -0.73
LINC00538-201ENST00000626109 OR4E1P0C645 316 aa10.51□□□□□ -0.73
LINC00538-201ENST00000626109 SMIM10L1P0DMW3 83 aa10.51□□□□□ -0.73
LINC00538-201ENST00000626109 MYL12AP19105 171 aa10.51□□□□□ -0.73
LINC00538-201ENST00000626109 CCNOP22674 350 aa10.51□□□□□ -0.73
LINC00538-201ENST00000626109 CD80P33681 288 aa10.51□□□□□ -0.73
LINC00538-201ENST00000626109 SPCS3P61009 180 aa10.51□□□□□ -0.73
LINC00538-201ENST00000626109 CD300CQ08708 224 aa10.51□□□□□ -0.73
LINC00538-201ENST00000626109 SELENBP1Q13228 472 aa10.51□□□□□ -0.73
LINC00538-201ENST00000626109 SSX1Q16384 188 aa10.51□□□□□ -0.73
LINC00538-201ENST00000626109 SOWAHCQ53LP3 525 aaPredicted RBP10.51□□□□□ -0.73
LINC00538-201ENST00000626109 TMEM41BQ5BJD5 291 aa10.51□□□□□ -0.73
LINC00538-201ENST00000626109 ESPNLQ6ZVH7 1005 aa10.51□□□□□ -0.73
LINC00538-201ENST00000626109 UBE3DQ7Z6J8 389 aa10.51□□□□□ -0.73
LINC00538-201ENST00000626109 CLIP4Q8N3C7 705 aa10.51□□□□□ -0.73
LINC00538-201ENST00000626109 TCEANCQ8N8B7 351 aa10.51□□□□□ -0.73
LINC00538-201ENST00000626109 VANGL1Q8TAA9 524 aaPredicted RBP10.51□□□□□ -0.73
LINC00538-201ENST00000626109 XAGE5Q8WWM1 108 aa10.51□□□□□ -0.73
LINC00538-201ENST00000626109 RAB8BQ92930 207 aa10.51□□□□□ -0.73
LINC00538-201ENST00000626109 SMIM10Q96HG1 83 aa10.51□□□□□ -0.73
LINC00538-201ENST00000626109 DPH1Q9BZG8 443 aa10.51□□□□□ -0.73
LINC00538-201ENST00000626109 ULBP3Q9BZM4 244 aa10.51□□□□□ -0.73
LINC00538-201ENST00000626109 SAV1Q9H4B6 383 aaPredicted RBP10.51□□□□□ -0.73
LINC00538-201ENST00000626109 SLAMF7Q9NQ25 335 aa10.51□□□□□ -0.73
LINC00538-201ENST00000626109 MRPL22Q9NWU5 206 aaKnown RBP10.51□□□□□ -0.73
LINC00538-201ENST00000626109 TVP23BQ9NYZ1 205 aa10.51□□□□□ -0.73
LINC00538-201ENST00000626109 DHCR7Q9UBM7 475 aaKnown RBP10.51□□□□□ -0.73
LINC00538-201ENST00000626109 EXOGQ9Y2C4 368 aaKnown RBP10.51□□□□□ -0.73
LINC00538-201ENST00000626109 GRIP1Q9Y3R0 1128 aa10.51□□□□□ -0.73
LINC00538-201ENST00000626109 PLSCR5A0PG75 271 aa10.5□□□□□ -0.73
LINC00538-201ENST00000626109 FAM90A7PA6NKC0 464 aa10.5□□□□□ -0.73
LINC00538-201ENST00000626109 FAM90A22PA8MWA6 464 aa10.5□□□□□ -0.73
LINC00538-201ENST00000626109 FAM90A12PA8MX19 464 aa10.5□□□□□ -0.73
LINC00538-201ENST00000626109 FAM90A23PA8MXZ1 464 aa10.5□□□□□ -0.73
LINC00538-201ENST00000626109 ZNF670-ZNF695F2Z2N8 137 aa10.5□□□□□ -0.73
LINC00538-201ENST00000626109 IFNL4K9M1U5 179 aa10.5□□□□□ -0.73
LINC00538-201ENST00000626109 GALR3O60755 368 aaPredicted RBP10.5□□□□□ -0.73
LINC00538-201ENST00000626109 OR12D1P0DN82 309 aa10.5□□□□□ -0.73
LINC00538-201ENST00000626109 MSR1P21757 451 aa10.5□□□□□ -0.73
LINC00538-201ENST00000626109 HIST1H1TP22492 207 aaPredicted RBP10.5□□□□□ -0.73
LINC00538-201ENST00000626109 RBMS1P29558 406 aaKnown RBP10.5□□□□□ -0.73
LINC00538-201ENST00000626109 CD79BP40259 229 aa10.5□□□□□ -0.73
LINC00538-201ENST00000626109 KCNJ8Q15842 424 aa10.5□□□□□ -0.73
LINC00538-201ENST00000626109 PRAMEF5Q5TYX0 476 aa10.5□□□□□ -0.73
LINC00538-201ENST00000626109 GPR157Q5UAW9 335 aa10.5□□□□□ -0.73
LINC00538-201ENST00000626109 PRAMEF6Q5VXH4 476 aa10.5□□□□□ -0.73
LINC00538-201ENST00000626109 PRAMEF7Q5VXH5 474 aa10.5□□□□□ -0.73
LINC00538-201ENST00000626109 ZNF544Q6NX49 715 aa10.5□□□□□ -0.73
LINC00538-201ENST00000626109 C3orf33Q6P1S2 294 aa10.5□□□□□ -0.73
LINC00538-201ENST00000626109 TMPRSS11AQ6ZMR5 421 aa10.5□□□□□ -0.73
LINC00538-201ENST00000626109 LINC00518Q8N0U6 118 aa10.5□□□□□ -0.73
LINC00538-201ENST00000626109 NLGN4XQ8N0W4 816 aa10.5□□□□□ -0.73
LINC00538-201ENST00000626109 METTL27Q8N6F8 245 aaPredicted RBP10.5□□□□□ -0.73
LINC00538-201ENST00000626109 OR9A4Q8NGU2 314 aa10.5□□□□□ -0.73
LINC00538-201ENST00000626109 OCC1Q8TAD7 63 aa10.5□□□□□ -0.73
LINC00538-201ENST00000626109 MMABQ96EY8 250 aaPredicted RBP10.5□□□□□ -0.73
LINC00538-201ENST00000626109 LRR1Q96L50 414 aa10.5□□□□□ -0.73
LINC00538-201ENST00000626109 BBS4Q96RK4 519 aa10.5□□□□□ -0.73
LINC00538-201ENST00000626109 PAPOLGQ9BWT3 736 aaKnown RBP10.5□□□□□ -0.73
LINC00538-201ENST00000626109 OR51I1Q9H343 314 aa10.5□□□□□ -0.73
LINC00538-201ENST00000626109 TMEM185BQ9H7F4 350 aa10.5□□□□□ -0.73
LINC00538-201ENST00000626109 ANKRA2Q9H9E1 313 aa10.5□□□□□ -0.73
LINC00538-201ENST00000626109 HHATLQ9HCP6 504 aa10.5□□□□□ -0.73
LINC00538-201ENST00000626109 BCL2L10Q9HD36 194 aa10.5□□□□□ -0.73
LINC00538-201ENST00000626109 PRDM7Q9NQW5 492 aa10.5□□□□□ -0.73
LINC00538-201ENST00000626109 NDUFB11Q9NX14 153 aa10.5□□□□□ -0.73
LINC00538-201ENST00000626109 TAS2R16Q9NYV7 291 aa10.5□□□□□ -0.73
LINC00538-201ENST00000626109 DNAJC27Q9NZQ0 273 aa10.5□□□□□ -0.73
LINC00538-201ENST00000626109 FBXL7Q9UJT9 491 aa10.5□□□□□ -0.73
LINC00538-201ENST00000626109 DIMT1Q9UNQ2 313 aaKnown RBP10.5□□□□□ -0.73
LINC00538-201ENST00000626109 LSM2Q9Y333 95 aaKnown RBP10.5□□□□□ -0.73
LINC00538-201ENST00000626109 ZNF860A6NHJ4 632 aa10.5□□□□□ -0.73
LINC00538-201ENST00000626109 SH2D7A6NKC9 451 aaPredicted RBP10.5□□□□□ -0.73
LINC00538-201ENST00000626109 C9orf172C9J069 976 aa10.5□□□□□ -0.73
LINC00538-201ENST00000626109 H0YIG0 161 aa10.5□□□□□ -0.73
LINC00538-201ENST00000626109 FOXS1O43638 330 aa10.5□□□□□ -0.73
LINC00538-201ENST00000626109 KCNK2O95069 426 aa10.5□□□□□ -0.73
LINC00538-201ENST00000626109 SOX14O95416 240 aa10.5□□□□□ -0.73
LINC00538-201ENST00000626109 FCER2P06734 321 aa10.5□□□□□ -0.73
LINC00538-201ENST00000626109 NR2F6P10588 404 aa10.5□□□□□ -0.73
LINC00538-201ENST00000626109 ATP5A1P25705 553 aaKnown RBP10.5□□□□□ -0.73
LINC00538-201ENST00000626109 CERS1P27544 350 aa10.5□□□□□ -0.73
LINC00538-201ENST00000626109 TNFSF8P32971 234 aa10.5□□□□□ -0.73
LINC00538-201ENST00000626109 BDH1Q02338 343 aa10.5□□□□□ -0.73
LINC00538-201ENST00000626109 ZNF91Q05481 1191 aa10.5□□□□□ -0.73
LINC00538-201ENST00000626109 MRPL49Q13405 166 aaKnown RBP10.5□□□□□ -0.73
LINC00538-201ENST00000626109 PDZK1Q5T2W1 519 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms