RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 ZNF84P51523 738 aa19.4■□□□□ 0.7
SF1-220ENST00000626028 IDH3GP51553 393 aaPredicted RBP19.4■□□□□ 0.7
SF1-220ENST00000626028 DSCR9P59020 149 aa19.4■□□□□ 0.7
SF1-220ENST00000626028 MELKQ14680 651 aa19.4■□□□□ 0.7
SF1-220ENST00000626028 KRT72Q14CN4 511 aa19.4■□□□□ 0.7
SF1-220ENST00000626028 RAB35Q15286 201 aa19.4■□□□□ 0.7
SF1-220ENST00000626028 EFNB3Q15768 340 aa19.4■□□□□ 0.7
SF1-220ENST00000626028 SWI5Q1ZZU3 235 aa19.4■□□□□ 0.7
SF1-220ENST00000626028 ZNF730Q6ZMV8 503 aa19.4■□□□□ 0.7
SF1-220ENST00000626028 TMPRSS11FQ6ZWK6 438 aa19.4■□□□□ 0.7
SF1-220ENST00000626028 RRM2BQ7LG56 351 aa19.4■□□□□ 0.7
SF1-220ENST00000626028 OAFQ86UD1 273 aa19.4■□□□□ 0.7
SF1-220ENST00000626028 NRMQ8IXM6 262 aa19.4■□□□□ 0.7
SF1-220ENST00000626028 SLC22A24Q8N4F4 322 aa19.4■□□□□ 0.7
SF1-220ENST00000626028 NOXO1Q8NFA2 376 aa19.4■□□□□ 0.7
SF1-220ENST00000626028 ZNF75AQ96N20 296 aa19.4■□□□□ 0.7
SF1-220ENST00000626028 TMEM38BQ9NVV0 291 aa19.4■□□□□ 0.7
SF1-220ENST00000626028 CD300AQ9UGN4 299 aa19.4■□□□□ 0.7
SF1-220ENST00000626028 TMEM5Q9Y2B1 443 aa19.4■□□□□ 0.7
SF1-220ENST00000626028 CR1P17927 2039 aa19.4■□□□□ 0.7
SF1-220ENST00000626028 A0A087WUU8 490 aa19.39■□□□□ 0.69
SF1-220ENST00000626028 IGHV2OR16-5A0A0B4J2B6 119 aa19.39■□□□□ 0.69
SF1-220ENST00000626028 ZNF503-AS2A6NEH8 195 aa19.39■□□□□ 0.69
SF1-220ENST00000626028 J3KTA2 159 aa19.39■□□□□ 0.69
SF1-220ENST00000626028 SEC14L2O76054 403 aa19.39■□□□□ 0.69
SF1-220ENST00000626028 HLA-HP01893 362 aa19.39■□□□□ 0.69
SF1-220ENST00000626028 QDPRP09417 244 aa19.39■□□□□ 0.69
SF1-220ENST00000626028 CD79AP11912 226 aa19.39■□□□□ 0.69
SF1-220ENST00000626028 ZNF14P17017 642 aaPredicted RBP19.39■□□□□ 0.69
SF1-220ENST00000626028 LAPTM4AQ15012 233 aa19.39■□□□□ 0.69
SF1-220ENST00000626028 C10orf128Q5T292 105 aa19.39■□□□□ 0.69
SF1-220ENST00000626028 MCHR2Q969V1 340 aa19.39■□□□□ 0.69
SF1-220ENST00000626028 NDEL1Q9GZM8 345 aa19.39■□□□□ 0.69
SF1-220ENST00000626028 ARL8BQ9NVJ2 186 aa19.39■□□□□ 0.69
SF1-220ENST00000626028 ZNF224Q9NZL3 707 aa19.39■□□□□ 0.69
SF1-220ENST00000626028 NDUFAF4Q9P032 175 aa19.39■□□□□ 0.69
SF1-220ENST00000626028 RHCGQ9UBD6 479 aa19.39■□□□□ 0.69
SF1-220ENST00000626028 TRIM64A6NGJ6 449 aa19.38■□□□□ 0.69
SF1-220ENST00000626028 TRIM64BA6NI03 449 aa19.38■□□□□ 0.69
SF1-220ENST00000626028 EFCAB9A8MZ26 197 aa19.38■□□□□ 0.69
SF1-220ENST00000626028 B9A039 149 aa19.38■□□□□ 0.69
SF1-220ENST00000626028 PIP5K1CO60331 668 aa19.38■□□□□ 0.69
SF1-220ENST00000626028 TRMUO75648 421 aaKnown RBP19.38■□□□□ 0.69
SF1-220ENST00000626028 RAB36O95755 333 aa19.38■□□□□ 0.69
SF1-220ENST00000626028 HEXAP06865 529 aa19.38■□□□□ 0.69
SF1-220ENST00000626028 H1F0P07305 194 aaKnown RBP19.38■□□□□ 0.69
SF1-220ENST00000626028 CALCRP30988 508 aa19.38■□□□□ 0.69
SF1-220ENST00000626028 YLPM1P49750 1951 aaKnown RBP19.38■□□□□ 0.69
SF1-220ENST00000626028 SNRPD2P62316 118 aaKnown RBP19.38■□□□□ 0.69
SF1-220ENST00000626028 RAB1AP62820 205 aa19.38■□□□□ 0.69
SF1-220ENST00000626028 NPRL3Q12980 569 aa19.38■□□□□ 0.69
SF1-220ENST00000626028 MST1LQ2TV78 715 aa19.38■□□□□ 0.69
SF1-220ENST00000626028 TSEN54Q7Z6J9 526 aaKnown RBP19.38■□□□□ 0.69
SF1-220ENST00000626028 ARHGAP24Q8N264 748 aa19.38■□□□□ 0.69
SF1-220ENST00000626028 MOSPD2Q8NHP6 518 aa19.38■□□□□ 0.69
SF1-220ENST00000626028 C7orf34Q96L11 122 aa19.38■□□□□ 0.69
SF1-220ENST00000626028 ALG12Q9BV10 488 aa19.38■□□□□ 0.69
SF1-220ENST00000626028 C1orf198Q9H425 327 aa19.38■□□□□ 0.69
SF1-220ENST00000626028 SPEF1Q9Y4P9 236 aa19.38■□□□□ 0.69
SF1-220ENST00000626028 A6NIZ1 184 aa19.37■□□□□ 0.69
SF1-220ENST00000626028 CELA3BP08861 270 aa19.37■□□□□ 0.69
SF1-220ENST00000626028 NPR2P20594 1047 aa19.37■□□□□ 0.69
SF1-220ENST00000626028 MAKP20794 623 aa19.37■□□□□ 0.69
SF1-220ENST00000626028 SMIM11AP58511 58 aa19.37■□□□□ 0.69
SF1-220ENST00000626028 RAP1BP61224 184 aa19.37■□□□□ 0.69
SF1-220ENST00000626028 RPL27P61353 136 aaKnown RBP19.37■□□□□ 0.69
SF1-220ENST00000626028 RAP1AP62834 184 aa19.37■□□□□ 0.69
SF1-220ENST00000626028 TNK1Q13470 666 aa19.37■□□□□ 0.69
SF1-220ENST00000626028 ADIPOQQ15848 244 aa19.37■□□□□ 0.69
SF1-220ENST00000626028 CLEC9AQ6UXN8 241 aa19.37■□□□□ 0.69
SF1-220ENST00000626028 SKA3Q8IX90 412 aa19.37■□□□□ 0.69
SF1-220ENST00000626028 CIARTQ8N365 385 aaPredicted RBP19.37■□□□□ 0.69
SF1-220ENST00000626028 SLC7A13Q8TCU3 470 aa19.37■□□□□ 0.69
SF1-220ENST00000626028 PYURFQ96I23 114 aa19.37■□□□□ 0.69
SF1-220ENST00000626028 DHRS1Q96LJ7 313 aa19.37■□□□□ 0.69
SF1-220ENST00000626028 CDRT15Q96T59 188 aa19.37■□□□□ 0.69
SF1-220ENST00000626028 KRCC1Q9NPI7 259 aaPredicted RBP19.37■□□□□ 0.69
SF1-220ENST00000626028 CSPG4Q6UVK1 2322 aa19.37■□□□□ 0.69
SF1-220ENST00000626028 AHCYL1O43865 530 aa19.36■□□□□ 0.69
SF1-220ENST00000626028 PTHP01270 115 aa19.36■□□□□ 0.69
SF1-220ENST00000626028 SERPINA5P05154 406 aa19.36■□□□□ 0.69
SF1-220ENST00000626028 CSF3P09919 207 aa19.36■□□□□ 0.69
SF1-220ENST00000626028 ZNF35P13682 527 aa19.36■□□□□ 0.69
SF1-220ENST00000626028 ACVR1BP36896 505 aa19.36■□□□□ 0.69
SF1-220ENST00000626028 PTDSS1P48651 473 aaKnown RBP19.36■□□□□ 0.69
SF1-220ENST00000626028 EFNA4P52798 201 aa19.36■□□□□ 0.69
SF1-220ENST00000626028 NUDT6P53370 316 aa19.36■□□□□ 0.69
SF1-220ENST00000626028 MRPS34P82930 218 aaKnown RBP19.36■□□□□ 0.69
SF1-220ENST00000626028 HGFACQ04756 655 aa19.36■□□□□ 0.69
SF1-220ENST00000626028 RUNX1T1Q06455 604 aa19.36■□□□□ 0.69
SF1-220ENST00000626028 SLC36A2Q495M3 483 aa19.36■□□□□ 0.69
SF1-220ENST00000626028 THEM4Q5T1C6 240 aa19.36■□□□□ 0.69
SF1-220ENST00000626028 MYPOPQ86VE0 399 aaPredicted RBP19.36■□□□□ 0.69
SF1-220ENST00000626028 FITM2Q8N6M3 262 aa19.36■□□□□ 0.69
SF1-220ENST00000626028 RNF148Q8N7C7 305 aa19.36■□□□□ 0.69
SF1-220ENST00000626028 NMD3Q96D46 503 aaKnown RBP19.36■□□□□ 0.69
SF1-220ENST00000626028 ZNF347Q96SE7 839 aa19.36■□□□□ 0.69
SF1-220ENST00000626028 KCNK17Q96T54 332 aa19.36■□□□□ 0.69
SF1-220ENST00000626028 PLK3Q9H4B4 646 aa19.36■□□□□ 0.69
SF1-220ENST00000626028 GSX1Q9H4S2 264 aaPredicted RBP19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms