RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 ZNF441Q8N8Z8 693 aa9.44□□□□□ -0.9
VPS11-208ENST00000621676 POC5Q8NA72 575 aa9.44□□□□□ -0.9
VPS11-208ENST00000621676 FDCSPQ8NFU4 85 aa9.44□□□□□ -0.9
VPS11-208ENST00000621676 ZNF671Q8TAW3 534 aa9.44□□□□□ -0.9
VPS11-208ENST00000621676 FNDC9Q8TBE3 224 aa9.44□□□□□ -0.9
VPS11-208ENST00000621676 TSEN15Q8WW01 171 aaKnown RBP9.44□□□□□ -0.9
VPS11-208ENST00000621676 POP5Q969H6 163 aaKnown RBP9.44□□□□□ -0.9
VPS11-208ENST00000621676 KIAA1143Q96AT1 154 aaPredicted RBP9.44□□□□□ -0.9
VPS11-208ENST00000621676 DACT3Q96B18 629 aaPredicted RBP9.44□□□□□ -0.9
VPS11-208ENST00000621676 PELI1Q96FA3 418 aa9.44□□□□□ -0.9
VPS11-208ENST00000621676 SERINC1Q9NRX5 453 aa9.44□□□□□ -0.9
VPS11-208ENST00000621676 SEMA5BQ9P283 1151 aa9.44□□□□□ -0.9
VPS11-208ENST00000621676 DIMT1Q9UNQ2 313 aaKnown RBP9.44□□□□□ -0.9
VPS11-208ENST00000621676 SLC5A6Q9Y289 635 aa9.44□□□□□ -0.9
VPS11-208ENST00000621676 EMC9Q9Y3B6 208 aa9.44□□□□□ -0.9
VPS11-208ENST00000621676 PKD1L2Q7Z442 2459 aa9.43□□□□□ -0.9
VPS11-208ENST00000621676 A8MV72 311 aaPredicted RBP9.43□□□□□ -0.9
VPS11-208ENST00000621676 MS4A18H0YCH9 400 aa9.43□□□□□ -0.9
VPS11-208ENST00000621676 SMAD9O15198 467 aaKnown RBP9.43□□□□□ -0.9
VPS11-208ENST00000621676 TMCC2O75069 709 aa9.43□□□□□ -0.9
VPS11-208ENST00000621676 ZNF823P16415 610 aa9.43□□□□□ -0.9
VPS11-208ENST00000621676 HOXB6P17509 224 aaKnown RBP9.43□□□□□ -0.9
VPS11-208ENST00000621676 TGM1P22735 817 aa9.43□□□□□ -0.9
VPS11-208ENST00000621676 PTGDSP41222 190 aa9.43□□□□□ -0.9
VPS11-208ENST00000621676 IFITM3Q01628 133 aa9.43□□□□□ -0.9
VPS11-208ENST00000621676 DCTN2Q13561 401 aaKnown RBP9.43□□□□□ -0.9
VPS11-208ENST00000621676 EFR3AQ14156 821 aa9.43□□□□□ -0.9
VPS11-208ENST00000621676 TAF13Q15543 124 aa9.43□□□□□ -0.9
VPS11-208ENST00000621676 IGFBP7Q16270 282 aa9.43□□□□□ -0.9
VPS11-208ENST00000621676 OCLNQ16625 522 aa9.43□□□□□ -0.9
VPS11-208ENST00000621676 MS4A18Q3C1V0 323 aa9.43□□□□□ -0.9
VPS11-208ENST00000621676 GRAMD2AQ8IUY3 354 aa9.43□□□□□ -0.9
VPS11-208ENST00000621676 FAM46BQ96A09 425 aa9.43□□□□□ -0.9
VPS11-208ENST00000621676 RFT1Q96AA3 541 aa9.43□□□□□ -0.9
VPS11-208ENST00000621676 DERL3Q96Q80 235 aa9.43□□□□□ -0.9
VPS11-208ENST00000621676 IQCMA0A1B0GVH7 501 aa9.43□□□□□ -0.9
VPS11-208ENST00000621676 DPM1O60762 260 aa9.43□□□□□ -0.9
VPS11-208ENST00000621676 OCM2P0CE71 109 aa9.43□□□□□ -0.9
VPS11-208ENST00000621676 OCMP0CE72 109 aaPredicted RBP9.43□□□□□ -0.9
VPS11-208ENST00000621676 SDHAP31040 664 aa9.43□□□□□ -0.9
VPS11-208ENST00000621676 TTKP33981 857 aa9.43□□□□□ -0.9
VPS11-208ENST00000621676 CTBP2P56545 445 aa9.43□□□□□ -0.9
VPS11-208ENST00000621676 PRPS1P60891 318 aa9.43□□□□□ -0.9
VPS11-208ENST00000621676 SIRPAP78324 504 aa9.43□□□□□ -0.9
VPS11-208ENST00000621676 PLPPR5Q32ZL2 321 aa9.43□□□□□ -0.9
VPS11-208ENST00000621676 UBE2UQ5VVX9 321 aa9.43□□□□□ -0.9
VPS11-208ENST00000621676 DPY19L2P2Q6ZN68 376 aa9.43□□□□□ -0.9
VPS11-208ENST00000621676 OR2M3Q8NG83 312 aa9.43□□□□□ -0.9
VPS11-208ENST00000621676 ZNF566Q969W8 418 aa9.43□□□□□ -0.9
VPS11-208ENST00000621676 PLPP3O14495 311 aa9.43□□□□□ -0.9
VPS11-208ENST00000621676 AKAP8O43823 692 aaKnown RBP9.43□□□□□ -0.9
VPS11-208ENST00000621676 MT-ND5P03915 603 aa9.43□□□□□ -0.9
VPS11-208ENST00000621676 SCG5P05408 212 aa9.43□□□□□ -0.9
VPS11-208ENST00000621676 DBHP09172 617 aa9.43□□□□□ -0.9
VPS11-208ENST00000621676 ASAH2BP0C7U1 165 aa9.43□□□□□ -0.9
VPS11-208ENST00000621676 APEX1P27695 318 aaKnown RBP9.43□□□□□ -0.9
VPS11-208ENST00000621676 SLC15A1P46059 708 aa9.43□□□□□ -0.9
VPS11-208ENST00000621676 GDI2P50395 445 aaKnown RBP9.43□□□□□ -0.9
VPS11-208ENST00000621676 GAS1P54826 345 aa9.43□□□□□ -0.9
VPS11-208ENST00000621676 FOXG1P55316 489 aaPredicted RBP9.43□□□□□ -0.9
VPS11-208ENST00000621676 CLDN15P56746 228 aa9.43□□□□□ -0.9
VPS11-208ENST00000621676 EXOSC6Q5RKV6 272 aaKnown RBP9.43□□□□□ -0.9
VPS11-208ENST00000621676 TIGD3Q6B0B8 471 aa9.43□□□□□ -0.9
VPS11-208ENST00000621676 H1FNTQ75WM6 255 aaPredicted RBP9.43□□□□□ -0.9
VPS11-208ENST00000621676 KRT74Q7RTS7 529 aa9.43□□□□□ -0.9
VPS11-208ENST00000621676 PRSS45Q7RTY3 260 aa9.43□□□□□ -0.9
VPS11-208ENST00000621676 ARIH2OSQ8N7S6 290 aa9.43□□□□□ -0.9
VPS11-208ENST00000621676 PLPP7Q8NBV4 271 aa9.43□□□□□ -0.9
VPS11-208ENST00000621676 PSMF1Q92530 271 aa9.43□□□□□ -0.9
VPS11-208ENST00000621676 HGDQ93099 445 aa9.43□□□□□ -0.9
VPS11-208ENST00000621676 ITFG2Q969R8 447 aa9.43□□□□□ -0.9
VPS11-208ENST00000621676 KCTD7Q96MP8 289 aa9.43□□□□□ -0.9
VPS11-208ENST00000621676 COQ7Q99807 217 aa9.43□□□□□ -0.9
VPS11-208ENST00000621676 UTP23Q9BRU9 249 aaKnown RBP9.43□□□□□ -0.9
VPS11-208ENST00000621676 IER2Q9BTL4 223 aa9.43□□□□□ -0.9
VPS11-208ENST00000621676 CDCA4Q9BXL8 241 aa9.43□□□□□ -0.9
VPS11-208ENST00000621676 ADAM19Q9H013 955 aa9.43□□□□□ -0.9
VPS11-208ENST00000621676 POLE3Q9NRF9 147 aa9.43□□□□□ -0.9
VPS11-208ENST00000621676 PCDHGA5Q9Y5G8 931 aa9.43□□□□□ -0.9
VPS11-208ENST00000621676 K7EM74 188 aa9.42□□□□□ -0.9
VPS11-208ENST00000621676 ZFPL1O95159 310 aa9.42□□□□□ -0.9
VPS11-208ENST00000621676 BGLAPP02818 100 aa9.42□□□□□ -0.9
VPS11-208ENST00000621676 QDPRP09417 244 aa9.42□□□□□ -0.9
VPS11-208ENST00000621676 IL18Q14116 193 aa9.42□□□□□ -0.9
VPS11-208ENST00000621676 ESPL1Q14674 2120 aa9.42□□□□□ -0.9
VPS11-208ENST00000621676 SSPNQ14714 243 aa9.42□□□□□ -0.9
VPS11-208ENST00000621676 PYDC2Q56P42 97 aa9.42□□□□□ -0.9
VPS11-208ENST00000621676 ZNF367Q7RTV3 350 aa9.42□□□□□ -0.9
VPS11-208ENST00000621676 SULF2Q8IWU5 870 aa9.42□□□□□ -0.9
VPS11-208ENST00000621676 UEVLDQ8IX04 471 aa9.42□□□□□ -0.9
VPS11-208ENST00000621676 GALNT16Q8N428 558 aa9.42□□□□□ -0.9
VPS11-208ENST00000621676 SAMD12Q8N8I0 201 aa9.42□□□□□ -0.9
VPS11-208ENST00000621676 NUBPLQ8TB37 319 aa9.42□□□□□ -0.9
VPS11-208ENST00000621676 DYNC2LI1Q8TCX1 351 aa9.42□□□□□ -0.9
VPS11-208ENST00000621676 DDIT4LQ96D03 193 aa9.42□□□□□ -0.9
VPS11-208ENST00000621676 FAM71F1Q96KD3 344 aaPredicted RBP9.42□□□□□ -0.9
VPS11-208ENST00000621676 CDC6Q99741 560 aa9.42□□□□□ -0.9
VPS11-208ENST00000621676 PLCXD1Q9NUJ7 323 aa9.42□□□□□ -0.9
VPS11-208ENST00000621676 INTS1Q8N201 2190 aaKnown RBP9.42□□□□□ -0.9
VPS11-208ENST00000621676 C5orf63A6NC05 138 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms