RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 TRABD2BA6NFA1 517 aa6.65□□□□□ -1.35
COLCA1-205ENST00000620864 PAPLNO95428 1278 aa6.65□□□□□ -1.35
COLCA1-205ENST00000620864 ITGBL1O95965 494 aaPredicted RBP6.65□□□□□ -1.35
COLCA1-205ENST00000620864 SNU13P55769 128 aaKnown RBP6.65□□□□□ -1.35
COLCA1-205ENST00000620864 OXA1LQ15070 435 aa6.65□□□□□ -1.35
COLCA1-205ENST00000620864 SLC10A6Q3KNW5 377 aa6.65□□□□□ -1.35
COLCA1-205ENST00000620864 SLC39A11Q8N1S5 342 aa6.65□□□□□ -1.35
COLCA1-205ENST00000620864 OR2M7Q8NG81 312 aa6.65□□□□□ -1.35
COLCA1-205ENST00000620864 OR51A4Q8NGJ6 313 aa6.65□□□□□ -1.35
COLCA1-205ENST00000620864 DVL3Q92997 716 aaPredicted RBP6.65□□□□□ -1.35
COLCA1-205ENST00000620864 SLC35E1Q96K37 410 aa6.65□□□□□ -1.35
COLCA1-205ENST00000620864 FAM71F1Q96KD3 344 aaPredicted RBP6.65□□□□□ -1.35
COLCA1-205ENST00000620864 INPP5KQ9BT40 448 aa6.65□□□□□ -1.35
COLCA1-205ENST00000620864 C11orf54Q9H0W9 315 aaPredicted RBP6.65□□□□□ -1.35
COLCA1-205ENST00000620864 SPNS1Q9H2V7 528 aa6.65□□□□□ -1.35
COLCA1-205ENST00000620864 POFUT1Q9H488 388 aa6.65□□□□□ -1.35
COLCA1-205ENST00000620864 UCK1Q9HA47 277 aa6.65□□□□□ -1.35
COLCA1-205ENST00000620864 KNDC1Q76NI1 1749 aa6.65□□□□□ -1.35
COLCA1-205ENST00000620864 A0A1B0GUH1 482 aa6.64□□□□□ -1.35
COLCA1-205ENST00000620864 TMEM269A0A1B0GVZ9 245 aa6.64□□□□□ -1.35
COLCA1-205ENST00000620864 SLC22A20A6NK97 555 aa6.64□□□□□ -1.35
COLCA1-205ENST00000620864 VNN1O95497 513 aa6.64□□□□□ -1.35
COLCA1-205ENST00000620864 HNRNPA2B1P22626 353 aaKnown RBP6.64□□□□□ -1.35
COLCA1-205ENST00000620864 HMGCLP35914 325 aa6.64□□□□□ -1.35
COLCA1-205ENST00000620864 WNT7BP56706 349 aa6.64□□□□□ -1.35
COLCA1-205ENST00000620864 SNRPGP62308 76 aaKnown RBP6.64□□□□□ -1.35
COLCA1-205ENST00000620864 SIRPAP78324 504 aa6.64□□□□□ -1.35
COLCA1-205ENST00000620864 SOWAHAQ2M3V2 549 aa6.64□□□□□ -1.35
COLCA1-205ENST00000620864 LY6G5CQ5SRR4 150 aa6.64□□□□□ -1.35
COLCA1-205ENST00000620864 C1QTNF12Q5T7M4 302 aa6.64□□□□□ -1.35
COLCA1-205ENST00000620864 NCR3LG1Q68D85 454 aa6.64□□□□□ -1.35
COLCA1-205ENST00000620864 RPUSD3Q6P087 351 aaKnown RBP6.64□□□□□ -1.35
COLCA1-205ENST00000620864 NLRC3Q7RTR2 1065 aa6.64□□□□□ -1.35
COLCA1-205ENST00000620864 SIAH3Q8IW03 269 aa6.64□□□□□ -1.35
COLCA1-205ENST00000620864 DEFB124Q8NES8 71 aa6.64□□□□□ -1.35
COLCA1-205ENST00000620864 SLC25A46Q96AG3 418 aa6.64□□□□□ -1.35
COLCA1-205ENST00000620864 IER2Q9BTL4 223 aa6.64□□□□□ -1.35
COLCA1-205ENST00000620864 DDX31Q9H8H2 851 aaKnown RBP6.64□□□□□ -1.35
COLCA1-205ENST00000620864 HRASLSQ9HDD0 168 aa6.64□□□□□ -1.35
COLCA1-205ENST00000620864 ADAMTS5Q9UNA0 930 aa6.64□□□□□ -1.35
COLCA1-205ENST00000620864 IER3IP1Q9Y5U9 82 aa6.64□□□□□ -1.35
COLCA1-205ENST00000620864 COX5AP20674 150 aa6.64□□□□□ -1.35
COLCA1-205ENST00000620864 PTNP21246 168 aa6.64□□□□□ -1.35
COLCA1-205ENST00000620864 ILKQ13418 452 aa6.64□□□□□ -1.35
COLCA1-205ENST00000620864 FFAR4Q5NUL3 377 aa6.64□□□□□ -1.35
COLCA1-205ENST00000620864 LCTLQ6UWM7 567 aa6.64□□□□□ -1.35
COLCA1-205ENST00000620864 OR9Q2Q8NGE9 314 aa6.64□□□□□ -1.35
COLCA1-205ENST00000620864 FAAP24Q9BTP7 215 aa6.64□□□□□ -1.35
COLCA1-205ENST00000620864 SORBS1Q9BX66 1292 aaKnown RBP6.64□□□□□ -1.35
COLCA1-205ENST00000620864 DPH1Q9BZG8 443 aa6.64□□□□□ -1.35
COLCA1-205ENST00000620864 A0A1W2PP55 124 aa6.64□□□□□ -1.35
COLCA1-205ENST00000620864 GBAP04062 536 aa6.64□□□□□ -1.35
COLCA1-205ENST00000620864 HTR1FP30939 366 aa6.64□□□□□ -1.35
COLCA1-205ENST00000620864 FOLR3P41439 243 aa6.64□□□□□ -1.35
COLCA1-205ENST00000620864 ID2Q02363 134 aa6.64□□□□□ -1.35
COLCA1-205ENST00000620864 ZNF91Q05481 1191 aa6.64□□□□□ -1.35
COLCA1-205ENST00000620864 TESK1Q15569 626 aa6.64□□□□□ -1.35
COLCA1-205ENST00000620864 TOR2AQ5JU69 321 aa6.64□□□□□ -1.35
COLCA1-205ENST00000620864 TMEM201Q5SNT2 666 aa6.64□□□□□ -1.35
COLCA1-205ENST00000620864 DGAT2L6Q6ZPD8 337 aa6.64□□□□□ -1.35
COLCA1-205ENST00000620864 COMMD6Q7Z4G1 85 aa6.64□□□□□ -1.35
COLCA1-205ENST00000620864 OR13C5Q8NGS8 318 aa6.64□□□□□ -1.35
COLCA1-205ENST00000620864 MS4A4AQ96JQ5 239 aa6.64□□□□□ -1.35
COLCA1-205ENST00000620864 HRASLS5Q96KN8 279 aa6.64□□□□□ -1.35
COLCA1-205ENST00000620864 SLC25A18Q9H1K4 315 aa6.64□□□□□ -1.35
COLCA1-205ENST00000620864 CXXC1Q9P0U4 656 aaPredicted RBP6.64□□□□□ -1.35
COLCA1-205ENST00000620864 OR14J1Q9UGF5 321 aa6.64□□□□□ -1.35
COLCA1-205ENST00000620864 OR5K3A6NET4 321 aa6.64□□□□□ -1.35
COLCA1-205ENST00000620864 B4GAT1O43505 415 aa6.64□□□□□ -1.35
COLCA1-205ENST00000620864 RAD1O60671 282 aa6.64□□□□□ -1.35
COLCA1-205ENST00000620864 AREGP15514 252 aa6.64□□□□□ -1.35
COLCA1-205ENST00000620864 OR10A3P58181 314 aa6.64□□□□□ -1.35
COLCA1-205ENST00000620864 RPS24P62847 133 aaKnown RBP6.64□□□□□ -1.35
COLCA1-205ENST00000620864 ZP2Q05996 745 aa6.64□□□□□ -1.35
COLCA1-205ENST00000620864 BTNL3Q6UXE8 466 aa6.64□□□□□ -1.35
COLCA1-205ENST00000620864 DUS3LQ96G46 650 aaKnown RBP6.64□□□□□ -1.35
COLCA1-205ENST00000620864 SMOQ99835 787 aa6.64□□□□□ -1.35
COLCA1-205ENST00000620864 ENKD1Q9H0I2 346 aa6.64□□□□□ -1.35
COLCA1-205ENST00000620864 OR52D1Q9H346 318 aa6.64□□□□□ -1.35
COLCA1-205ENST00000620864 R3HDMLQ9H3Y0 253 aa6.64□□□□□ -1.35
COLCA1-205ENST00000620864 GPR32O75388 356 aa6.64□□□□□ -1.35
COLCA1-205ENST00000620864 HSBP1O75506 76 aa6.64□□□□□ -1.35
COLCA1-205ENST00000620864 YIF1AO95070 293 aa6.64□□□□□ -1.35
COLCA1-205ENST00000620864 OR13C7P0DN81 318 aa6.64□□□□□ -1.35
COLCA1-205ENST00000620864 NTF3P20783 257 aa6.64□□□□□ -1.35
COLCA1-205ENST00000620864 FKBP2P26885 142 aaKnown RBP6.64□□□□□ -1.35
COLCA1-205ENST00000620864 CLLU1Q5K131 121 aa6.64□□□□□ -1.35
COLCA1-205ENST00000620864 LAX1Q8IWV1 398 aa6.64□□□□□ -1.35
COLCA1-205ENST00000620864 CREB3L4Q8TEY5 395 aa6.64□□□□□ -1.35
COLCA1-205ENST00000620864 DIO2Q92813 273 aa6.64□□□□□ -1.35
COLCA1-205ENST00000620864 WDR92Q96MX6 357 aa6.64□□□□□ -1.35
COLCA1-205ENST00000620864 DPH2Q9BQC3 489 aaPredicted RBP6.64□□□□□ -1.35
COLCA1-205ENST00000620864 RBM24Q9BX46 236 aaKnown RBP6.64□□□□□ -1.35
COLCA1-205ENST00000620864 PLK3Q9H4B4 646 aa6.64□□□□□ -1.35
COLCA1-205ENST00000620864 WDR76Q9H967 626 aa6.64□□□□□ -1.35
COLCA1-205ENST00000620864 NDUFB11Q9NX14 153 aa6.64□□□□□ -1.35
COLCA1-205ENST00000620864 PLAGL1Q9UM63 463 aa6.64□□□□□ -1.35
COLCA1-205ENST00000620864 RGPD1P0DJD0 1748 aa6.64□□□□□ -1.35
COLCA1-205ENST00000620864 XRCC3O43542 346 aa6.64□□□□□ -1.35
COLCA1-205ENST00000620864 TBX18O95935 607 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms