RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 CALML5Q9NZT1 146 aa3.82□□□□□ -1.8
SNCA-213ENST00000618500 ZMAT5Q9UDW3 170 aaKnown RBP3.82□□□□□ -1.8
SNCA-213ENST00000618500 SNX24Q9Y343 169 aa3.82□□□□□ -1.8
SNCA-213ENST00000618500 SACSQ9NZJ4 4579 aa3.82□□□□□ -1.8
SNCA-213ENST00000618500 PRR14LQ5THK1 2151 aa3.82□□□□□ -1.8
SNCA-213ENST00000618500 A0A096LPE4 126 aa3.82□□□□□ -1.8
SNCA-213ENST00000618500 A0A1W2PPZ6 126 aa3.82□□□□□ -1.8
SNCA-213ENST00000618500 ZC3H12DA2A288 527 aaKnown RBP3.82□□□□□ -1.8
SNCA-213ENST00000618500 G3V2L1 256 aa3.82□□□□□ -1.8
SNCA-213ENST00000618500 SEC22BO75396 215 aa3.82□□□□□ -1.8
SNCA-213ENST00000618500 RPLP1P05386 114 aaKnown RBP3.82□□□□□ -1.8
SNCA-213ENST00000618500 INHBAP08476 426 aa3.82□□□□□ -1.8
SNCA-213ENST00000618500 MMP7P09237 267 aaPredicted RBP3.82□□□□□ -1.8
SNCA-213ENST00000618500 FAHP16930 419 aa3.82□□□□□ -1.8
SNCA-213ENST00000618500 ZNF43P17038 809 aa3.82□□□□□ -1.8
SNCA-213ENST00000618500 TNFRSF1AP19438 455 aa3.82□□□□□ -1.8
SNCA-213ENST00000618500 EFNB2P52799 333 aa3.82□□□□□ -1.8
SNCA-213ENST00000618500 FOXA1P55317 472 aa3.82□□□□□ -1.8
SNCA-213ENST00000618500 CLDN17P56750 224 aa3.82□□□□□ -1.8
SNCA-213ENST00000618500 FAM189A2Q15884 450 aa3.82□□□□□ -1.8
SNCA-213ENST00000618500 DPY19L1Q2PZI1 675 aa3.82□□□□□ -1.8
SNCA-213ENST00000618500 KLHL22Q53GT1 634 aa3.82□□□□□ -1.8
SNCA-213ENST00000618500 C10orf128Q5T292 105 aa3.82□□□□□ -1.8
SNCA-213ENST00000618500 LCE2CQ5TA81 110 aa3.82□□□□□ -1.8
SNCA-213ENST00000618500 LIPMQ5VYY2 423 aa3.82□□□□□ -1.8
SNCA-213ENST00000618500 CD276Q5ZPR3 534 aa3.82□□□□□ -1.8
SNCA-213ENST00000618500 SLC27A4Q6P1M0 643 aa3.82□□□□□ -1.8
SNCA-213ENST00000618500 H1FNTQ75WM6 255 aaPredicted RBP3.82□□□□□ -1.8
SNCA-213ENST00000618500 KLBQ86Z14 1044 aa3.82□□□□□ -1.8
SNCA-213ENST00000618500 CELF2-AS1Q8N7Q2 184 aa3.82□□□□□ -1.8
SNCA-213ENST00000618500 OR2T11Q8NH01 316 aa3.82□□□□□ -1.8
SNCA-213ENST00000618500 OR6X1Q8NH79 312 aa3.82□□□□□ -1.8
SNCA-213ENST00000618500 JADE3Q92613 823 aa3.82□□□□□ -1.8
SNCA-213ENST00000618500 ERGIC1Q969X5 290 aa3.82□□□□□ -1.8
SNCA-213ENST00000618500 PHF21AQ96BD5 680 aa3.82□□□□□ -1.8
SNCA-213ENST00000618500 TESCQ96BS2 214 aa3.82□□□□□ -1.8
SNCA-213ENST00000618500 KTI12Q96EK9 354 aaPredicted RBP3.82□□□□□ -1.8
SNCA-213ENST00000618500 NEIL1Q96FI4 390 aaPredicted RBP3.82□□□□□ -1.8
SNCA-213ENST00000618500 COG8Q96MW5 612 aa3.82□□□□□ -1.8
SNCA-213ENST00000618500 KCNA7Q96RP8 456 aa3.82□□□□□ -1.8
SNCA-213ENST00000618500 GATA5Q9BWX5 397 aaPredicted RBP3.82□□□□□ -1.8
SNCA-213ENST00000618500 CHIAQ9BZP6 476 aa3.82□□□□□ -1.8
SNCA-213ENST00000618500 SLC19A3Q9BZV2 496 aa3.82□□□□□ -1.8
SNCA-213ENST00000618500 SLC38A1Q9H2H9 487 aa3.82□□□□□ -1.8
SNCA-213ENST00000618500 OR51I1Q9H343 314 aa3.82□□□□□ -1.8
SNCA-213ENST00000618500 NARFLQ9H6Q4 476 aa3.82□□□□□ -1.8
SNCA-213ENST00000618500 CDH20Q9HBT6 801 aa3.82□□□□□ -1.8
SNCA-213ENST00000618500 TMEM165Q9HC07 324 aa3.82□□□□□ -1.8
SNCA-213ENST00000618500 TMEM38BQ9NVV0 291 aa3.82□□□□□ -1.8
SNCA-213ENST00000618500 THUMPD1Q9NXG2 353 aaKnown RBP3.82□□□□□ -1.8
SNCA-213ENST00000618500 STX18Q9P2W9 335 aaKnown RBP3.82□□□□□ -1.8
SNCA-213ENST00000618500 DCDC2Q9UHG0 476 aa3.82□□□□□ -1.8
SNCA-213ENST00000618500 BTNL2Q9UIR0 455 aa3.82□□□□□ -1.8
SNCA-213ENST00000618500 VPREB3Q9UKI3 123 aa3.82□□□□□ -1.8
SNCA-213ENST00000618500 TRAV36DV7A0A075B6V5 113 aa3.81□□□□□ -1.8
SNCA-213ENST00000618500 TMEM178BH3BS89 294 aa3.81□□□□□ -1.8
SNCA-213ENST00000618500 FCMRO60667 390 aa3.81□□□□□ -1.8
SNCA-213ENST00000618500 BCAS1O75363 584 aaPredicted RBP3.81□□□□□ -1.8
SNCA-213ENST00000618500 C6orf47O95873 294 aa3.81□□□□□ -1.8
SNCA-213ENST00000618500 OR8G3PP0DMU2 310 aa3.81□□□□□ -1.8
SNCA-213ENST00000618500 TNFSF4P23510 183 aa3.81□□□□□ -1.8
SNCA-213ENST00000618500 CFHR2P36980 270 aa3.81□□□□□ -1.8
SNCA-213ENST00000618500 KIR2DS4P43632 304 aa3.81□□□□□ -1.8
SNCA-213ENST00000618500 GATA4P43694 442 aa3.81□□□□□ -1.8
SNCA-213ENST00000618500 SMCPP49901 116 aaPredicted RBP3.81□□□□□ -1.8
SNCA-213ENST00000618500 CLDN8P56748 225 aa3.81□□□□□ -1.8
SNCA-213ENST00000618500 RAB1AP62820 205 aa3.81□□□□□ -1.8
SNCA-213ENST00000618500 BTKQ06187 659 aa3.81□□□□□ -1.8
SNCA-213ENST00000618500 ACSM1Q08AH1 577 aa3.81□□□□□ -1.8
SNCA-213ENST00000618500 GPR68Q15743 365 aa3.81□□□□□ -1.8
SNCA-213ENST00000618500 KCTD19Q17RG1 926 aaPredicted RBP3.81□□□□□ -1.8
SNCA-213ENST00000618500 ZNF718Q3SXZ3 478 aa3.81□□□□□ -1.8
SNCA-213ENST00000618500 ZNF404Q494X3 552 aa3.81□□□□□ -1.8
SNCA-213ENST00000618500 SLC36A2Q495M3 483 aa3.81□□□□□ -1.8
SNCA-213ENST00000618500 SPDYE7PQ495Y7 208 aa3.81□□□□□ -1.8
SNCA-213ENST00000618500 PHYHD1Q5SRE7 291 aa3.81□□□□□ -1.8
SNCA-213ENST00000618500 FAM69AQ5T7M9 428 aa3.81□□□□□ -1.8
SNCA-213ENST00000618500 ANXA8L1Q5VT79 327 aa3.81□□□□□ -1.8
SNCA-213ENST00000618500 ZNF813Q6ZN06 617 aa3.81□□□□□ -1.8
SNCA-213ENST00000618500 HDDC2Q7Z4H3 204 aa3.81□□□□□ -1.8
SNCA-213ENST00000618500 PXKQ7Z7A4 578 aa3.81□□□□□ -1.8
SNCA-213ENST00000618500 SLC22A24Q8N4F4 322 aa3.81□□□□□ -1.8
SNCA-213ENST00000618500 CNOT9Q92600 299 aaKnown RBP3.81□□□□□ -1.8
SNCA-213ENST00000618500 DNAJA3Q96EY1 480 aa3.81□□□□□ -1.8
SNCA-213ENST00000618500 PAFAH2Q99487 392 aa3.81□□□□□ -1.8
SNCA-213ENST00000618500 TMEM43Q9BTV4 400 aa3.81□□□□□ -1.8
SNCA-213ENST00000618500 SIRPDQ9H106 197 aa3.81□□□□□ -1.8
SNCA-213ENST00000618500 NINJ2Q9NZG7 142 aa3.81□□□□□ -1.8
SNCA-213ENST00000618500 KIF17Q9P2E2 1029 aa3.81□□□□□ -1.8
SNCA-213ENST00000618500 GMPR2Q9P2T1 348 aaKnown RBP3.81□□□□□ -1.8
SNCA-213ENST00000618500 ATPIF1Q9UII2 106 aa3.81□□□□□ -1.8
SNCA-213ENST00000618500 TRIM33Q9UPN9 1127 aa3.81□□□□□ -1.8
SNCA-213ENST00000618500 TIMM22Q9Y584 194 aa3.81□□□□□ -1.8
SNCA-213ENST00000618500 USH1CQ9Y6N9 552 aa3.81□□□□□ -1.8
SNCA-213ENST00000618500 PLCE1Q9P212 2302 aa3.81□□□□□ -1.8
SNCA-213ENST00000618500 IGHV1-69DA0A0B4J2H0 117 aa3.81□□□□□ -1.8
SNCA-213ENST00000618500 RNF103-CHMP3A0A140T963 221 aa3.81□□□□□ -1.8
SNCA-213ENST00000618500 ZNF879B4DU55 563 aa3.81□□□□□ -1.8
SNCA-213ENST00000618500 E9PQ18 207 aa3.81□□□□□ -1.8
SNCA-213ENST00000618500 AZIN1O14977 448 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms