RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 DUSP18Q8NEJ0 188 aa5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 HSD17B8Q92506 261 aa5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 MOGAT1Q96PD6 335 aa5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 FOXQ1Q9C009 403 aa5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 WDR76Q9H967 626 aa5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 SLC22A13Q9Y226 551 aa5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 TMED7Q9Y3B3 224 aa5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 OTOFQ9HC10 1997 aa5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 TRAV36DV7A0A075B6V5 113 aa5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 LILRA5A6NI73 299 aa5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 GABARAPH6UMI1 98 aa5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 ZNF208O43345 1280 aa5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 NME1P15531 152 aaKnown RBP5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 MSR1P21757 451 aa5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 HSD11B1P28845 292 aa5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 SDHAP31040 664 aa5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 CD226Q15762 336 aa5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 GLYATL3Q5SZD4 288 aa5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 MARCH3Q86UD3 253 aa5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 BEST3Q8N1M1 668 aa5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 ZFAND1Q8TCF1 268 aa5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 HAVCR1Q96D42 359 aa5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 URM1Q9BTM9 101 aaKnown RBP5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 LRRC61Q9BV99 259 aa5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 SLA2Q9H6Q3 261 aa5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 MYEF2Q9P2K5 600 aaKnown RBP5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 BLACEA4D250 179 aa5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 ALDOBP05062 364 aa5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 HOXC4P09017 264 aaPredicted RBP5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 GPR3P46089 330 aa5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 GPLD1P80108 840 aa5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 CCINQ13939 588 aa5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 CD276Q5ZPR3 534 aa5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 SLC16A9Q7RTY1 509 aa5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 MRGPREQ86SM8 312 aa5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 CMTM4Q8IZR5 234 aa5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 OR14A16Q8NHC5 309 aa5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 YIPF5Q969M3 257 aa5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 ATF6BQ99941 703 aa5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 SEC22CQ9BRL7 303 aa5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 EMC6Q9BV81 110 aa5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 ULBP3Q9BZM4 244 aa5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 IFT46Q9NQC8 304 aa5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 OR2S2Q9NQN1 319 aa5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 MPDZO75970 2070 aa5.14□□□□□ -1.59
SYNCRIP-204ENST00000616122 C13orf42A0A1B0GVH6 325 aa5.13□□□□□ -1.59
SYNCRIP-204ENST00000616122 TMEM212A6NML5 194 aa5.13□□□□□ -1.59
SYNCRIP-204ENST00000616122 SMLR1H3BR10 107 aa5.13□□□□□ -1.59
SYNCRIP-204ENST00000616122 FOXS1O43638 330 aa5.13□□□□□ -1.59
SYNCRIP-204ENST00000616122 S100A9P06702 114 aaKnown RBP5.13□□□□□ -1.59
SYNCRIP-204ENST00000616122 ALOX5APP20292 161 aa5.13□□□□□ -1.59
SYNCRIP-204ENST00000616122 EEF1A1P68104 462 aaKnown RBP5.13□□□□□ -1.59
SYNCRIP-204ENST00000616122 PUDPQ08623 228 aa5.13□□□□□ -1.59
SYNCRIP-204ENST00000616122 OR7A5Q15622 319 aa5.13□□□□□ -1.59
SYNCRIP-204ENST00000616122 TSSK4Q6SA08 328 aa5.13□□□□□ -1.59
SYNCRIP-204ENST00000616122 ABHD12BQ7Z5M8 362 aaPredicted RBP5.13□□□□□ -1.59
SYNCRIP-204ENST00000616122 PM20D2Q8IYS1 436 aa5.13□□□□□ -1.59
SYNCRIP-204ENST00000616122 PLPP7Q8NBV4 271 aa5.13□□□□□ -1.59
SYNCRIP-204ENST00000616122 ZNF680Q8NEM1 530 aa5.13□□□□□ -1.59
SYNCRIP-204ENST00000616122 OR6M1Q8NGM8 313 aa5.13□□□□□ -1.59
SYNCRIP-204ENST00000616122 THAP6Q8TBB0 222 aa5.13□□□□□ -1.59
SYNCRIP-204ENST00000616122 FAM3DQ96BQ1 224 aa5.13□□□□□ -1.59
SYNCRIP-204ENST00000616122 OR1F2PQ96R84 312 aa5.13□□□□□ -1.59
SYNCRIP-204ENST00000616122 SDHCQ99643 169 aaPredicted RBP5.13□□□□□ -1.59
SYNCRIP-204ENST00000616122 SCN2AQ99250 2005 aa5.13□□□□□ -1.59
SYNCRIP-204ENST00000616122 PLXNA1Q9UIW2 1896 aa5.13□□□□□ -1.59
SYNCRIP-204ENST00000616122 PSME4Q14997 1843 aa5.13□□□□□ -1.59
SYNCRIP-204ENST00000616122 IGHV5-51A0A0C4DH38 117 aa5.13□□□□□ -1.59
SYNCRIP-204ENST00000616122 A0A1B0GTH9 108 aa5.13□□□□□ -1.59
SYNCRIP-204ENST00000616122 OR14I1A6ND48 311 aa5.13□□□□□ -1.59
SYNCRIP-204ENST00000616122 SYT7O43581 403 aa5.13□□□□□ -1.59
SYNCRIP-204ENST00000616122 EIF4EP06730 217 aaKnown RBP5.13□□□□□ -1.59
SYNCRIP-204ENST00000616122 CT45A8P0DMV1 189 aa5.13□□□□□ -1.59
SYNCRIP-204ENST00000616122 CT45A9P0DMV2 189 aa5.13□□□□□ -1.59
SYNCRIP-204ENST00000616122 SLC2A1P11166 492 aa5.13□□□□□ -1.59
SYNCRIP-204ENST00000616122 CDKN2AP42771 156 aaKnown RBP5.13□□□□□ -1.59
SYNCRIP-204ENST00000616122 CT45A2Q5DJT8 189 aa5.13□□□□□ -1.59
SYNCRIP-204ENST00000616122 C12orf45Q8N5I9 185 aaPredicted RBP5.13□□□□□ -1.59
SYNCRIP-204ENST00000616122 NAT6Q93015 286 aa5.13□□□□□ -1.59
SYNCRIP-204ENST00000616122 FAM71F1Q96KD3 344 aaPredicted RBP5.13□□□□□ -1.59
SYNCRIP-204ENST00000616122 MNTQ99583 582 aa5.13□□□□□ -1.59
SYNCRIP-204ENST00000616122 CCDC86Q9H6F5 360 aaKnown RBP5.13□□□□□ -1.59
SYNCRIP-204ENST00000616122 C2orf42Q9NWW7 574 aa5.13□□□□□ -1.59
SYNCRIP-204ENST00000616122 MED29Q9NX70 200 aa5.13□□□□□ -1.59
SYNCRIP-204ENST00000616122 C2orf72A6NCS6 295 aa5.13□□□□□ -1.59
SYNCRIP-204ENST00000616122 SULT1B1O43704 296 aa5.13□□□□□ -1.59
SYNCRIP-204ENST00000616122 SC5DO75845 299 aa5.13□□□□□ -1.59
SYNCRIP-204ENST00000616122 ZFAND5O76080 213 aa5.13□□□□□ -1.59
SYNCRIP-204ENST00000616122 ALX3O95076 343 aa5.13□□□□□ -1.59
SYNCRIP-204ENST00000616122 CSTBP04080 98 aaKnown RBP5.13□□□□□ -1.59
SYNCRIP-204ENST00000616122 DCTDP32321 178 aa5.13□□□□□ -1.59
SYNCRIP-204ENST00000616122 TAS2R20P59543 309 aa5.13□□□□□ -1.59
SYNCRIP-204ENST00000616122 UBE2IP63279 158 aaKnown RBP5.13□□□□□ -1.59
SYNCRIP-204ENST00000616122 ZNF74Q16587 644 aa5.13□□□□□ -1.59
SYNCRIP-204ENST00000616122 TMEM176BQ3YBM2 270 aaPredicted RBP5.13□□□□□ -1.59
SYNCRIP-204ENST00000616122 CDNFQ49AH0 187 aa5.13□□□□□ -1.59
SYNCRIP-204ENST00000616122 ZNF658BQ4V348 819 aaPredicted RBP5.13□□□□□ -1.59
SYNCRIP-204ENST00000616122 EIF5AL1Q6IS14 154 aaKnown RBP5.13□□□□□ -1.59
SYNCRIP-204ENST00000616122 KCTD9Q7L273 389 aa5.13□□□□□ -1.59
SYNCRIP-204ENST00000616122 TMEM17Q86X19 198 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms