RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 TRABD2BA6NFA1 517 aa11.69□□□□□ -0.54
TCF4-248ENST00000616053 COX7A1P24310 79 aa11.69□□□□□ -0.54
TCF4-248ENST00000616053 HNRNPH3P31942 346 aaKnown RBP11.69□□□□□ -0.54
TCF4-248ENST00000616053 SCML4Q8N228 414 aa11.69□□□□□ -0.54
TCF4-248ENST00000616053 RHOFQ9HBH0 211 aa11.69□□□□□ -0.54
TCF4-248ENST00000616053 IGHV3OR16-12A0A075B7B8 117 aa11.68□□□□□ -0.54
TCF4-248ENST00000616053 P2RX6O15547 441 aa11.68□□□□□ -0.54
TCF4-248ENST00000616053 NUDT3O95989 172 aa11.68□□□□□ -0.54
TCF4-248ENST00000616053 SLC7A13Q8TCU3 470 aa11.68□□□□□ -0.54
TCF4-248ENST00000616053 TMEM147Q9BVK8 224 aa11.68□□□□□ -0.54
TCF4-248ENST00000616053 CTDSP1Q9GZU7 261 aa11.68□□□□□ -0.54
TCF4-248ENST00000616053 FZD8Q9H461 694 aa11.68□□□□□ -0.54
TCF4-248ENST00000616053 UFC1Q9Y3C8 167 aa11.68□□□□□ -0.54
TCF4-248ENST00000616053 SULT1A3P0DMM9 295 aa11.68□□□□□ -0.54
TCF4-248ENST00000616053 SULT1A4P0DMN0 295 aa11.68□□□□□ -0.54
TCF4-248ENST00000616053 TMEM97Q5BJF2 176 aa11.68□□□□□ -0.54
TCF4-248ENST00000616053 TGIF2LYQ8IUE0 185 aa11.68□□□□□ -0.54
TCF4-248ENST00000616053 DNAJC5GQ8N7S2 189 aa11.68□□□□□ -0.54
TCF4-248ENST00000616053 OR6S1Q8NH40 331 aa11.68□□□□□ -0.54
TCF4-248ENST00000616053 OR5K2Q8NHB8 316 aa11.68□□□□□ -0.54
TCF4-248ENST00000616053 FIBINQ8TAL6 211 aa11.68□□□□□ -0.54
TCF4-248ENST00000616053 ACY3Q96HD9 319 aa11.68□□□□□ -0.54
TCF4-248ENST00000616053 OR6C2Q9NZP2 312 aa11.68□□□□□ -0.54
TCF4-248ENST00000616053 RIMS3Q9UJD0 308 aa11.68□□□□□ -0.54
TCF4-248ENST00000616053 HELTA6NFD8 242 aa11.68□□□□□ -0.54
TCF4-248ENST00000616053 CEACAM3P40198 252 aa11.68□□□□□ -0.54
TCF4-248ENST00000616053 PCBP3P57721 371 aaKnown RBP11.68□□□□□ -0.54
TCF4-248ENST00000616053 CACNG7P62955 275 aa11.68□□□□□ -0.54
TCF4-248ENST00000616053 ZFAND4Q86XD8 727 aa11.68□□□□□ -0.54
TCF4-248ENST00000616053 ACOT4Q8N9L9 421 aa11.68□□□□□ -0.54
TCF4-248ENST00000616053 OR11G2Q8NGC1 345 aa11.68□□□□□ -0.54
TCF4-248ENST00000616053 CCL17Q92583 94 aa11.68□□□□□ -0.54
TCF4-248ENST00000616053 OR52A1Q9UKL2 312 aa11.68□□□□□ -0.54
TCF4-248ENST00000616053 K7ERQ8 282 aa11.68□□□□□ -0.54
TCF4-248ENST00000616053 SYNGR2O43760 224 aa11.68□□□□□ -0.54
TCF4-248ENST00000616053 GM2AP17900 193 aa11.68□□□□□ -0.54
TCF4-248ENST00000616053 Q6ZTK2 550 aa11.68□□□□□ -0.54
TCF4-248ENST00000616053 SLC24A4Q8NFF2 622 aa11.68□□□□□ -0.54
TCF4-248ENST00000616053 OR5M1Q8NGP8 315 aa11.68□□□□□ -0.54
TCF4-248ENST00000616053 PHOX2AO14813 284 aa11.68□□□□□ -0.54
TCF4-248ENST00000616053 PROZP22891 400 aa11.68□□□□□ -0.54
TCF4-248ENST00000616053 ZNF816Q0VGE8 651 aaPredicted RBP11.68□□□□□ -0.54
TCF4-248ENST00000616053 METTL11BQ5VVY1 283 aa11.68□□□□□ -0.54
TCF4-248ENST00000616053 OR1L4Q8NGR5 311 aa11.68□□□□□ -0.54
TCF4-248ENST00000616053 DPH2Q9BQC3 489 aaPredicted RBP11.68□□□□□ -0.54
TCF4-248ENST00000616053 C20orf85Q9H1P6 137 aa11.68□□□□□ -0.54
TCF4-248ENST00000616053 RABAC1Q9UI14 185 aa11.68□□□□□ -0.54
TCF4-248ENST00000616053 A0A1W2PRD5 423 aa11.68□□□□□ -0.54
TCF4-248ENST00000616053 A0A1W2PRF3 423 aa11.68□□□□□ -0.54
TCF4-248ENST00000616053 A0A1W2PRM7 423 aa11.68□□□□□ -0.54
TCF4-248ENST00000616053 CSO75390 466 aaKnown RBP11.68□□□□□ -0.54
TCF4-248ENST00000616053 ST6GAL1P15907 406 aa11.68□□□□□ -0.54
TCF4-248ENST00000616053 HMGCLP35914 325 aa11.68□□□□□ -0.54
TCF4-248ENST00000616053 ACSM1Q08AH1 577 aa11.68□□□□□ -0.54
TCF4-248ENST00000616053 ANKRD34AQ69YU3 496 aa11.68□□□□□ -0.54
TCF4-248ENST00000616053 C5orf46Q6UWT4 87 aa11.68□□□□□ -0.54
TCF4-248ENST00000616053 YTHDF1Q9BYJ9 559 aaKnown RBP11.68□□□□□ -0.54
TCF4-248ENST00000616053 ZDHHC2Q9UIJ5 367 aa11.68□□□□□ -0.54
TCF4-248ENST00000616053 TRAV27A0A087WT01 109 aa11.68□□□□□ -0.54
TCF4-248ENST00000616053 J3KRW8 73 aa11.68□□□□□ -0.54
TCF4-248ENST00000616053 SLC10A3P09131 477 aa11.68□□□□□ -0.54
TCF4-248ENST00000616053 PDZD3Q86UT5 571 aa11.68□□□□□ -0.54
TCF4-248ENST00000616053 CPOQ8IVL8 374 aa11.68□□□□□ -0.54
TCF4-248ENST00000616053 OR5A2Q8NGI9 324 aa11.68□□□□□ -0.54
TCF4-248ENST00000616053 BABAM2Q9NXR7 383 aa11.68□□□□□ -0.54
TCF4-248ENST00000616053 COA4Q9NYJ1 87 aa11.68□□□□□ -0.54
TCF4-248ENST00000616053 MRPS28Q9Y2Q9 187 aaKnown RBP11.68□□□□□ -0.54
TCF4-248ENST00000616053 TCRBV5S4A2TA0A5A2 114 aa11.67□□□□□ -0.54
TCF4-248ENST00000616053 CDRT15L2A8MXV6 281 aa11.67□□□□□ -0.54
TCF4-248ENST00000616053 ZNF593O00488 134 aaPredicted RBP11.67□□□□□ -0.54
TCF4-248ENST00000616053 MS4A2Q01362 244 aa11.67□□□□□ -0.54
TCF4-248ENST00000616053 PHLDA2Q53GA4 152 aa11.67□□□□□ -0.54
TCF4-248ENST00000616053 METAP1DQ6UB28 335 aaPredicted RBP11.67□□□□□ -0.54
TCF4-248ENST00000616053 RETREG3Q86VR2 466 aa11.67□□□□□ -0.54
TCF4-248ENST00000616053 OR4F17Q8NGA8 305 aa11.67□□□□□ -0.54
TCF4-248ENST00000616053 OR4F5Q8NH21 305 aa11.67□□□□□ -0.54
TCF4-248ENST00000616053 PIGTQ969N2 578 aa11.67□□□□□ -0.54
TCF4-248ENST00000616053 OR4F4Q96R69 305 aa11.67□□□□□ -0.54
TCF4-248ENST00000616053 RASL11BQ9BPW5 248 aa11.67□□□□□ -0.54
TCF4-248ENST00000616053 SIX4Q9UIU6 781 aa11.67□□□□□ -0.54
TCF4-248ENST00000616053 RFPL3O75679 317 aa11.67□□□□□ -0.54
TCF4-248ENST00000616053 ITGAMP11215 1152 aa11.67□□□□□ -0.54
TCF4-248ENST00000616053 POU4F3Q15319 338 aa11.67□□□□□ -0.54
TCF4-248ENST00000616053 EBF2Q9HAK2 575 aa11.67□□□□□ -0.54
TCF4-248ENST00000616053 CSNK1G3Q9Y6M4 447 aa11.67□□□□□ -0.54
TCF4-248ENST00000616053 A0A096LPE4 126 aa11.67□□□□□ -0.54
TCF4-248ENST00000616053 A0A1W2PPZ6 126 aa11.67□□□□□ -0.54
TCF4-248ENST00000616053 PTP4A2Q12974 167 aa11.67□□□□□ -0.54
TCF4-248ENST00000616053 PSAPL1Q6NUJ1 521 aa11.67□□□□□ -0.54
TCF4-248ENST00000616053 ACSM6Q6P461 480 aa11.67□□□□□ -0.54
TCF4-248ENST00000616053 COMMD6Q7Z4G1 85 aa11.67□□□□□ -0.54
TCF4-248ENST00000616053 SPRED1Q7Z699 444 aa11.67□□□□□ -0.54
TCF4-248ENST00000616053 LIN28AQ9H9Z2 209 aaKnown RBP11.67□□□□□ -0.54
TCF4-248ENST00000616053 FAM212BQ9NTI7 297 aaPredicted RBP11.67□□□□□ -0.54
TCF4-248ENST00000616053 NECAP2Q9NVZ3 263 aa11.67□□□□□ -0.54
TCF4-248ENST00000616053 SLC25A17O43808 307 aa11.67□□□□□ -0.54
TCF4-248ENST00000616053 CSF3P09919 207 aa11.67□□□□□ -0.54
TCF4-248ENST00000616053 APEHP13798 732 aaKnown RBP11.67□□□□□ -0.54
TCF4-248ENST00000616053 RAB9AP51151 201 aa11.67□□□□□ -0.54
TCF4-248ENST00000616053 RPL30P62888 115 aaKnown RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms