RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 CHST5Q9GZS9 411 aa8.03□□□□□ -1.12
VPS11-206ENST00000614944 EGLN1Q9GZT9 426 aa8.03□□□□□ -1.12
VPS11-206ENST00000614944 ABCB9Q9NP78 766 aa8.03□□□□□ -1.12
VPS11-206ENST00000614944 DLL4Q9NR61 685 aa8.03□□□□□ -1.12
VPS11-206ENST00000614944 SIDT1Q9NXL6 827 aaKnown RBP8.03□□□□□ -1.12
VPS11-206ENST00000614944 SLAMF8Q9P0V8 285 aa8.03□□□□□ -1.12
VPS11-206ENST00000614944 ATG4BQ9Y4P1 393 aa8.03□□□□□ -1.12
VPS11-206ENST00000614944 CDH10Q9Y6N8 788 aa8.03□□□□□ -1.12
VPS11-206ENST00000614944 CACNA1EQ15878 2313 aa8.03□□□□□ -1.12
VPS11-206ENST00000614944 ELOVL7A1L3X0 281 aa8.03□□□□□ -1.12
VPS11-206ENST00000614944 M0R082 166 aa8.03□□□□□ -1.12
VPS11-206ENST00000614944 M0R143 59 aa8.03□□□□□ -1.12
VPS11-206ENST00000614944 SAP18O00422 153 aaKnown RBP8.03□□□□□ -1.12
VPS11-206ENST00000614944 FOXS1O43638 330 aa8.03□□□□□ -1.12
VPS11-206ENST00000614944 RP2O75695 350 aa8.03□□□□□ -1.12
VPS11-206ENST00000614944 CSNK2A2P19784 350 aaPredicted RBP8.03□□□□□ -1.12
VPS11-206ENST00000614944 CERS1P27544 350 aa8.03□□□□□ -1.12
VPS11-206ENST00000614944 AVPR1BP47901 424 aa8.03□□□□□ -1.12
VPS11-206ENST00000614944 PITPNBP48739 271 aa8.03□□□□□ -1.12
VPS11-206ENST00000614944 TLE4Q04727 773 aa8.03□□□□□ -1.12
VPS11-206ENST00000614944 RUNX2Q13950 521 aa8.03□□□□□ -1.12
VPS11-206ENST00000614944 TIMM50Q3ZCQ8 353 aa8.03□□□□□ -1.12
VPS11-206ENST00000614944 LRRN1Q6UXK5 716 aa8.03□□□□□ -1.12
VPS11-206ENST00000614944 SLITRK4Q8IW52 837 aa8.03□□□□□ -1.12
VPS11-206ENST00000614944 OR56A1Q8NGH5 318 aa8.03□□□□□ -1.12
VPS11-206ENST00000614944 ZNF501Q96CX3 271 aaPredicted RBP8.03□□□□□ -1.12
VPS11-206ENST00000614944 SPACA9Q96E40 222 aaPredicted RBP8.03□□□□□ -1.12
VPS11-206ENST00000614944 DIRAS2Q96HU8 199 aa8.03□□□□□ -1.12
VPS11-206ENST00000614944 TPT1P8Q9HAU6 139 aa8.03□□□□□ -1.12
VPS11-206ENST00000614944 GNG8Q9UK08 70 aa8.03□□□□□ -1.12
VPS11-206ENST00000614944 TMEM218A2RU14 115 aa8.02□□□□□ -1.12
VPS11-206ENST00000614944 HYKKA2RU49 373 aa8.02□□□□□ -1.12
VPS11-206ENST00000614944 BCKDKO14874 412 aa8.02□□□□□ -1.12
VPS11-206ENST00000614944 ARPC2O15144 300 aa8.02□□□□□ -1.12
VPS11-206ENST00000614944 GMFGO60234 142 aa8.02□□□□□ -1.12
VPS11-206ENST00000614944 SEMA7AO75326 666 aa8.02□□□□□ -1.12
VPS11-206ENST00000614944 TOXO94900 526 aa8.02□□□□□ -1.12
VPS11-206ENST00000614944 LRATO95237 230 aa8.02□□□□□ -1.12
VPS11-206ENST00000614944 SLC2A2P11168 524 aaPredicted RBP8.02□□□□□ -1.12
VPS11-206ENST00000614944 PVRP15151 417 aa8.02□□□□□ -1.12
VPS11-206ENST00000614944 CXCL3P19876 107 aa8.02□□□□□ -1.12
VPS11-206ENST00000614944 GIFP27352 417 aa8.02□□□□□ -1.12
VPS11-206ENST00000614944 APOBEC3AP31941 199 aaPredicted RBP8.02□□□□□ -1.12
VPS11-206ENST00000614944 CCKBRP32239 447 aa8.02□□□□□ -1.12
VPS11-206ENST00000614944 GPR4P46093 362 aa8.02□□□□□ -1.12
VPS11-206ENST00000614944 IDH3GP51553 393 aaPredicted RBP8.02□□□□□ -1.12
VPS11-206ENST00000614944 GFERP55789 205 aa8.02□□□□□ -1.12
VPS11-206ENST00000614944 HBA1P69905 142 aa8.02□□□□□ -1.12
VPS11-206ENST00000614944 MRPS10P82664 201 aaKnown RBP8.02□□□□□ -1.12
VPS11-206ENST00000614944 VLDLRP98155 873 aa8.02□□□□□ -1.12
VPS11-206ENST00000614944 GPR176Q14439 515 aa8.02□□□□□ -1.12
VPS11-206ENST00000614944 RGNQ15493 299 aa8.02□□□□□ -1.12
VPS11-206ENST00000614944 OR52W1Q6IF63 320 aa8.02□□□□□ -1.12
VPS11-206ENST00000614944 UQCC3Q6UW78 93 aa8.02□□□□□ -1.12
VPS11-206ENST00000614944 C15orf54Q8N8G6 183 aa8.02□□□□□ -1.12
VPS11-206ENST00000614944 AMER3Q8N944 861 aa8.02□□□□□ -1.12
VPS11-206ENST00000614944 OR2T12Q8NG77 320 aa8.02□□□□□ -1.12
VPS11-206ENST00000614944 OR5M9Q8NGP3 310 aa8.02□□□□□ -1.12
VPS11-206ENST00000614944 SUN3Q8TAQ9 357 aa8.02□□□□□ -1.12
VPS11-206ENST00000614944 FBLIM1Q8WUP2 373 aa8.02□□□□□ -1.12
VPS11-206ENST00000614944 CCDC107Q8WV48 283 aa8.02□□□□□ -1.12
VPS11-206ENST00000614944 SEPHS2Q99611 448 aa8.02□□□□□ -1.12
VPS11-206ENST00000614944 RSRP1Q9BUV0 290 aa8.02□□□□□ -1.12
VPS11-206ENST00000614944 MFFQ9GZY8 342 aa8.02□□□□□ -1.12
VPS11-206ENST00000614944 TMEM138Q9NPI0 162 aa8.02□□□□□ -1.12
VPS11-206ENST00000614944 NANSQ9NR45 359 aa8.02□□□□□ -1.12
VPS11-206ENST00000614944 UTS2RQ9UKP6 389 aa8.02□□□□□ -1.12
VPS11-206ENST00000614944 TDRD6O60522 2096 aaKnown RBP8.02□□□□□ -1.13
VPS11-206ENST00000614944 IGLV3-12A0A075B6K2 115 aa8.02□□□□□ -1.13
VPS11-206ENST00000614944 MEIKINA0A087WXM9 373 aa8.02□□□□□ -1.13
VPS11-206ENST00000614944 SYT5O00445 386 aa8.02□□□□□ -1.13
VPS11-206ENST00000614944 TP53I11O14683 189 aa8.02□□□□□ -1.13
VPS11-206ENST00000614944 ZNF749O43361 778 aa8.02□□□□□ -1.13
VPS11-206ENST00000614944 KCNK5O95279 499 aa8.02□□□□□ -1.13
VPS11-206ENST00000614944 PMP2P02689 132 aa8.02□□□□□ -1.13
VPS11-206ENST00000614944 FGF5P12034 268 aa8.02□□□□□ -1.13
VPS11-206ENST00000614944 NT5EP21589 574 aa8.02□□□□□ -1.13
VPS11-206ENST00000614944 ADH6P28332 368 aa8.02□□□□□ -1.13
VPS11-206ENST00000614944 TDGF1P3P51864 188 aa8.02□□□□□ -1.13
VPS11-206ENST00000614944 ITGA1P56199 1179 aa8.02□□□□□ -1.13
VPS11-206ENST00000614944 MC1RQ01726 317 aa8.02□□□□□ -1.13
VPS11-206ENST00000614944 NHLH1Q02575 133 aa8.02□□□□□ -1.13
VPS11-206ENST00000614944 TSPAN31Q12999 210 aa8.02□□□□□ -1.13
VPS11-206ENST00000614944 SF3A2Q15428 464 aaKnown RBP8.02□□□□□ -1.13
VPS11-206ENST00000614944 TCEA2Q15560 299 aa8.02□□□□□ -1.13
VPS11-206ENST00000614944 RABL3Q5HYI8 236 aa8.02□□□□□ -1.13
VPS11-206ENST00000614944 BCL2L15Q5TBC7 163 aa8.02□□□□□ -1.13
VPS11-206ENST00000614944 OR6K3Q8NGY3 331 aa8.02□□□□□ -1.13
VPS11-206ENST00000614944 OR2G2Q8NGZ5 317 aa8.02□□□□□ -1.13
VPS11-206ENST00000614944 ELMOD3Q96FG2 381 aa8.02□□□□□ -1.13
VPS11-206ENST00000614944 TMED9Q9BVK6 235 aa8.02□□□□□ -1.13
VPS11-206ENST00000614944 CSTL1Q9H114 145 aa8.02□□□□□ -1.13
VPS11-206ENST00000614944 SERINC1Q9NRX5 453 aa8.02□□□□□ -1.13
VPS11-206ENST00000614944 SLC6A13Q9NSD5 602 aa8.02□□□□□ -1.13
VPS11-206ENST00000614944 GDF2Q9UK05 429 aaPredicted RBP8.02□□□□□ -1.13
VPS11-206ENST00000614944 ZDHHC8Q9ULC8 765 aa8.02□□□□□ -1.13
VPS11-206ENST00000614944 ZNF780BQ9Y6R6 833 aa8.02□□□□□ -1.13
VPS11-206ENST00000614944 C7orf66A4D0T2 115 aa8.02□□□□□ -1.13
VPS11-206ENST00000614944 IFNA17P01571 189 aa8.02□□□□□ -1.13
VPS11-206ENST00000614944 RCC1P18754 421 aaPredicted RBP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms