RNA–Protein interactions for RNA: ENST00000600310.5

UPF1-209, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-209ENST00000600310 MAGEE2Q8TD90 523 aaPredicted RBP16.98■□□□□ 0.31
UPF1-209ENST00000600310 DNAJC9Q8WXX5 260 aa16.98■□□□□ 0.31
UPF1-209ENST00000600310 HSD17B8Q92506 261 aa16.98■□□□□ 0.31
UPF1-209ENST00000600310 MCHR2Q969V1 340 aa16.98■□□□□ 0.31
UPF1-209ENST00000600310 ERMAPQ96PL5 475 aaPredicted RBP16.98■□□□□ 0.31
UPF1-209ENST00000600310 IFT27Q9BW83 186 aa16.98■□□□□ 0.31
UPF1-209ENST00000600310 PLA2G12AQ9BZM1 189 aa16.98■□□□□ 0.31
UPF1-209ENST00000600310 SEMA6AQ9H2E6 1030 aa16.98■□□□□ 0.31
UPF1-209ENST00000600310 REV1Q9UBZ9 1251 aa16.98■□□□□ 0.31
UPF1-209ENST00000600310 ZNF99A8MXY4 864 aaPredicted RBP16.97■□□□□ 0.31
UPF1-209ENST00000600310 XKRYO14609 159 aa16.97■□□□□ 0.31
UPF1-209ENST00000600310 ARHGEF9O43307 516 aa16.97■□□□□ 0.31
UPF1-209ENST00000600310 DHHO43323 396 aa16.97■□□□□ 0.31
UPF1-209ENST00000600310 IDH3BO43837 385 aa16.97■□□□□ 0.31
UPF1-209ENST00000600310 AHCYL1O43865 530 aa16.97■□□□□ 0.31
UPF1-209ENST00000600310 SOX14O95416 240 aa16.97■□□□□ 0.31
UPF1-209ENST00000600310 THBDP07204 575 aa16.97■□□□□ 0.31
UPF1-209ENST00000600310 IGFBP1P08833 259 aaPredicted RBP16.97■□□□□ 0.31
UPF1-209ENST00000600310 KRR1Q13601 381 aaKnown RBP16.97■□□□□ 0.31
UPF1-209ENST00000600310 DAZAP2Q15038 168 aaPredicted RBP16.97■□□□□ 0.31
UPF1-209ENST00000600310 TAB1Q15750 504 aa16.97■□□□□ 0.31
UPF1-209ENST00000600310 MESTQ5EB52 335 aa16.97■□□□□ 0.31
UPF1-209ENST00000600310 CLEC12AQ5QGZ9 265 aa16.97■□□□□ 0.31
UPF1-209ENST00000600310 C1QTNF12Q5T7M4 302 aa16.97■□□□□ 0.31
UPF1-209ENST00000600310 ANKRD16Q6P6B7 361 aa16.97■□□□□ 0.31
UPF1-209ENST00000600310 ZNF627Q7L945 461 aa16.97■□□□□ 0.31
UPF1-209ENST00000600310 SSX8Q7RTT4 187 aa16.97■□□□□ 0.31
UPF1-209ENST00000600310 OR8D4Q8NGM9 314 aa16.97■□□□□ 0.31
UPF1-209ENST00000600310 BCL2L2Q92843 193 aaPredicted RBP16.97■□□□□ 0.31
UPF1-209ENST00000600310 RASD2Q96D21 266 aa16.97■□□□□ 0.31
UPF1-209ENST00000600310 GABARAPL1Q9H0R8 117 aa16.97■□□□□ 0.31
UPF1-209ENST00000600310 SMURF2Q9HAU4 748 aa16.97■□□□□ 0.31
UPF1-209ENST00000600310 ZNF226Q9NYT6 803 aa16.97■□□□□ 0.31
UPF1-209ENST00000600310 POFUT2Q9Y2G5 429 aa16.97■□□□□ 0.31
UPF1-209ENST00000600310 PRSS37A4D1T9 235 aa16.96■□□□□ 0.31
UPF1-209ENST00000600310 BHLHE40O14503 412 aa16.96■□□□□ 0.31
UPF1-209ENST00000600310 SOCS2O14508 198 aa16.96■□□□□ 0.31
UPF1-209ENST00000600310 CASKO14936 926 aa16.96■□□□□ 0.31
UPF1-209ENST00000600310 OSMP13725 252 aa16.96■□□□□ 0.31
UPF1-209ENST00000600310 DAPP51397 102 aa16.96■□□□□ 0.31
UPF1-209ENST00000600310 MYBPC1Q00872 1141 aa16.96■□□□□ 0.31
UPF1-209ENST00000600310 CD47Q08722 323 aa16.96■□□□□ 0.31
UPF1-209ENST00000600310 TBRG1Q3YBR2 411 aa16.96■□□□□ 0.31
UPF1-209ENST00000600310 THEM4Q5T1C6 240 aa16.96■□□□□ 0.31
UPF1-209ENST00000600310 C10orf128Q5T292 105 aa16.96■□□□□ 0.31
UPF1-209ENST00000600310 ZNF787Q6DD87 383 aa16.96■□□□□ 0.31
UPF1-209ENST00000600310 ADCK1Q86TW2 530 aa16.96■□□□□ 0.31
UPF1-209ENST00000600310 WDR31Q8NA23 367 aa16.96■□□□□ 0.31
UPF1-209ENST00000600310 STMN2Q93045 179 aa16.96■□□□□ 0.31
UPF1-209ENST00000600310 ZC3HAV1LQ96H79 300 aaKnown RBP16.96■□□□□ 0.31
UPF1-209ENST00000600310 RBP7Q96R05 134 aa16.96■□□□□ 0.31
UPF1-209ENST00000600310 FOXB1Q99853 325 aa16.96■□□□□ 0.31
UPF1-209ENST00000600310 TSSK6Q9BXA6 273 aa16.96■□□□□ 0.31
UPF1-209ENST00000600310 NELFAQ9H3P2 528 aa16.96■□□□□ 0.31
UPF1-209ENST00000600310 SLC17A5Q9NRA2 495 aa16.96■□□□□ 0.31
UPF1-209ENST00000600310 TBC1D23Q9NUY8 699 aa16.96■□□□□ 0.31
UPF1-209ENST00000600310 OAZ3Q9UMX2 235 aa16.96■□□□□ 0.31
UPF1-209ENST00000600310 SLC22A23A1A5C7 686 aa16.95■□□□□ 0.3
UPF1-209ENST00000600310 HOXB1P14653 301 aaPredicted RBP16.95■□□□□ 0.3
UPF1-209ENST00000600310 CRYGSP22914 178 aa16.95■□□□□ 0.3
UPF1-209ENST00000600310 SLC36A3Q495N2 470 aa16.95■□□□□ 0.3
UPF1-209ENST00000600310 SLC25A47Q6Q0C1 308 aa16.95■□□□□ 0.3
UPF1-209ENST00000600310 ZNF295-AS1Q8N0V1 137 aa16.95■□□□□ 0.3
UPF1-209ENST00000600310 PQLC1Q8N2U9 271 aa16.95■□□□□ 0.3
UPF1-209ENST00000600310 LNX2Q8N448 690 aa16.95■□□□□ 0.3
UPF1-209ENST00000600310 ICA1LQ8NDH6 482 aa16.95■□□□□ 0.3
UPF1-209ENST00000600310 TEX47Q8TBZ9 253 aa16.95■□□□□ 0.3
UPF1-209ENST00000600310 MARVELD3Q96A59 401 aa16.95■□□□□ 0.3
UPF1-209ENST00000600310 MUCL1Q96DR8 90 aa16.95■□□□□ 0.3
UPF1-209ENST00000600310 SNX18Q96RF0 628 aa16.95■□□□□ 0.3
UPF1-209ENST00000600310 OBP2BQ9NPH6 170 aa16.95■□□□□ 0.3
UPF1-209ENST00000600310 PAPOLBQ9NRJ5 636 aaKnown RBP16.95■□□□□ 0.3
UPF1-209ENST00000600310 KIF17Q9P2E2 1029 aa16.95■□□□□ 0.3
UPF1-209ENST00000600310 BAIAP2Q9UQB8 552 aa16.95■□□□□ 0.3
UPF1-209ENST00000600310 SLC25A15Q9Y619 301 aa16.95■□□□□ 0.3
UPF1-209ENST00000600310 TEX15Q9BXT5 2789 aa16.95■□□□□ 0.3
UPF1-209ENST00000600310 IGKV1D-43A0A0B4J1Z2 117 aa16.94■□□□□ 0.3
UPF1-209ENST00000600310 SAC3D1A6NKF1 404 aa16.94■□□□□ 0.3
UPF1-209ENST00000600310 H3BN98 237 aa16.94■□□□□ 0.3
UPF1-209ENST00000600310 H7C1C5 153 aa16.94■□□□□ 0.3
UPF1-209ENST00000600310 SLC2A10O95528 541 aa16.94■□□□□ 0.3
UPF1-209ENST00000600310 HIST1H1CP16403 213 aaKnown RBP16.94■□□□□ 0.3
UPF1-209ENST00000600310 NOS3P29474 1203 aa16.94■□□□□ 0.3
UPF1-209ENST00000600310 CDKN2AP42771 156 aaKnown RBP16.94■□□□□ 0.3
UPF1-209ENST00000600310 LCN6P62502 163 aa16.94■□□□□ 0.3
UPF1-209ENST00000600310 FMODQ06828 376 aa16.94■□□□□ 0.3
UPF1-209ENST00000600310 PPA1Q15181 289 aa16.94■□□□□ 0.3
UPF1-209ENST00000600310 HIKESHIQ53FT3 197 aa16.94■□□□□ 0.3
UPF1-209ENST00000600310 PTCHD4Q6ZW05 846 aa16.94■□□□□ 0.3
UPF1-209ENST00000600310 WFDC8Q8IUA0 241 aa16.94■□□□□ 0.3
UPF1-209ENST00000600310 LURAP1LQ8IV03 231 aa16.94■□□□□ 0.3
UPF1-209ENST00000600310 PARP8Q8N3A8 854 aa16.94■□□□□ 0.3
UPF1-209ENST00000600310 OR2T33Q8NG76 320 aa16.94■□□□□ 0.3
UPF1-209ENST00000600310 OR4Q3Q8NH05 313 aa16.94■□□□□ 0.3
UPF1-209ENST00000600310 OR52N5Q8NH56 324 aa16.94■□□□□ 0.3
UPF1-209ENST00000600310 C14orf79Q96F83 325 aa16.94■□□□□ 0.3
UPF1-209ENST00000600310 OSBPL10Q9BXB5 764 aa16.94■□□□□ 0.3
UPF1-209ENST00000600310 TMEM38BQ9NVV0 291 aa16.94■□□□□ 0.3
UPF1-209ENST00000600310 VSX1Q9NZR4 365 aaPredicted RBP16.94■□□□□ 0.3
UPF1-209ENST00000600310 AMDHD2Q9Y303 409 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms