RNA–Protein interactions for RNA: ENST00000600012.5

UPF1-208, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 501 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-208ENST00000600012 LNX2Q8N448 690 aa11.23□□□□□ -0.61
UPF1-208ENST00000600012 TMEM99Q8N816 258 aa11.23□□□□□ -0.61
UPF1-208ENST00000600012 SLC38A2Q96QD8 506 aa11.23□□□□□ -0.61
UPF1-208ENST00000600012 NR1H4Q96RI1 486 aaPredicted RBP11.23□□□□□ -0.61
UPF1-208ENST00000600012 GPX7Q96SL4 187 aaPredicted RBP11.23□□□□□ -0.61
UPF1-208ENST00000600012 KATNB1Q9BVA0 655 aa11.23□□□□□ -0.61
UPF1-208ENST00000600012 PRRG3Q9BZD7 231 aa11.23□□□□□ -0.61
UPF1-208ENST00000600012 NDEL1Q9GZM8 345 aa11.23□□□□□ -0.61
UPF1-208ENST00000600012 DNAJC27Q9NZQ0 273 aa11.23□□□□□ -0.61
UPF1-208ENST00000600012 GPR52Q9Y2T5 361 aa11.23□□□□□ -0.61
UPF1-208ENST00000600012 CORINQ9Y5Q5 1042 aa11.23□□□□□ -0.61
UPF1-208ENST00000600012 IER3IP1Q9Y5U9 82 aa11.23□□□□□ -0.61
UPF1-208ENST00000600012 ALPK2Q86TB3 2170 aa11.23□□□□□ -0.61
UPF1-208ENST00000600012 IGHV3-15A0A0B4J1V0 119 aa11.22□□□□□ -0.61
UPF1-208ENST00000600012 GJE1A6NN92 205 aa11.22□□□□□ -0.61
UPF1-208ENST00000600012 ZNF814B7Z6K7 855 aa11.22□□□□□ -0.61
UPF1-208ENST00000600012 RNF13O43567 381 aa11.22□□□□□ -0.61
UPF1-208ENST00000600012 SMPD2O60906 423 aa11.22□□□□□ -0.61
UPF1-208ENST00000600012 OR6A2O95222 327 aa11.22□□□□□ -0.61
UPF1-208ENST00000600012 HMGN1P05114 100 aa11.22□□□□□ -0.61
UPF1-208ENST00000600012 AHCYP23526 432 aa11.22□□□□□ -0.61
UPF1-208ENST00000600012 NUDT6P53370 316 aa11.22□□□□□ -0.61
UPF1-208ENST00000600012 SLC35A1P78382 337 aa11.22□□□□□ -0.61
UPF1-208ENST00000600012 PUDPQ08623 228 aa11.22□□□□□ -0.61
UPF1-208ENST00000600012 JMJD1CQ15652 2540 aa11.22□□□□□ -0.61
UPF1-208ENST00000600012 BCL2A1Q16548 175 aa11.22□□□□□ -0.61
UPF1-208ENST00000600012 C6orf141Q5SZD1 244 aa11.22□□□□□ -0.61
UPF1-208ENST00000600012 OR2A2Q6IF42 318 aa11.22□□□□□ -0.61
UPF1-208ENST00000600012 H1FNTQ75WM6 255 aaPredicted RBP11.22□□□□□ -0.61
UPF1-208ENST00000600012 CHMP1BQ7LBR1 199 aa11.22□□□□□ -0.61
UPF1-208ENST00000600012 P4HA3Q7Z4N8 544 aa11.22□□□□□ -0.61
UPF1-208ENST00000600012 SCAIQ8N9R8 606 aa11.22□□□□□ -0.61
UPF1-208ENST00000600012 OR2V1Q8NHB1 315 aa11.22□□□□□ -0.61
UPF1-208ENST00000600012 RHOXF1Q8NHV9 184 aa11.22□□□□□ -0.61
UPF1-208ENST00000600012 PIGTQ969N2 578 aa11.22□□□□□ -0.61
UPF1-208ENST00000600012 RASD2Q96D21 266 aa11.22□□□□□ -0.61
UPF1-208ENST00000600012 PLEKHA8Q96JA3 519 aa11.22□□□□□ -0.61
UPF1-208ENST00000600012 ADGRG7Q96K78 797 aa11.22□□□□□ -0.61
UPF1-208ENST00000600012 Q96M85 177 aa11.22□□□□□ -0.61
UPF1-208ENST00000600012 TSPAN32Q96QS1 320 aa11.22□□□□□ -0.61
UPF1-208ENST00000600012 TEX12Q9BXU0 123 aa11.22□□□□□ -0.61
UPF1-208ENST00000600012 SRXN1Q9BYN0 137 aa11.22□□□□□ -0.61
UPF1-208ENST00000600012 NRIP3Q9NQ35 241 aa11.22□□□□□ -0.61
UPF1-208ENST00000600012 INIPQ9NRY2 104 aa11.22□□□□□ -0.61
UPF1-208ENST00000600012 BAIAP2Q9UQB8 552 aa11.22□□□□□ -0.61
UPF1-208ENST00000600012 TLN2Q9Y4G6 2542 aa11.22□□□□□ -0.61
UPF1-208ENST00000600012 TEX13CA0A0J9YWL9 993 aa11.21□□□□□ -0.61
UPF1-208ENST00000600012 SLC22A20A6NK97 555 aa11.21□□□□□ -0.61
UPF1-208ENST00000600012 FAM183AA6NL82 134 aa11.21□□□□□ -0.61
UPF1-208ENST00000600012 MS4A18H0YCH9 400 aa11.21□□□□□ -0.61
UPF1-208ENST00000600012 LINC01387J3KSC0 135 aa11.21□□□□□ -0.61
UPF1-208ENST00000600012 SLC1A7O00341 560 aa11.21□□□□□ -0.61
UPF1-208ENST00000600012 TLX2O43763 284 aaPredicted RBP11.21□□□□□ -0.61
UPF1-208ENST00000600012 XPNPEP2O43895 674 aa11.21□□□□□ -0.61
UPF1-208ENST00000600012 CXCL13O43927 109 aa11.21□□□□□ -0.61
UPF1-208ENST00000600012 RAMP1O60894 148 aa11.21□□□□□ -0.61
UPF1-208ENST00000600012 TGM6O95932 706 aa11.21□□□□□ -0.61
UPF1-208ENST00000600012 LYNP07948 512 aa11.21□□□□□ -0.61
UPF1-208ENST00000600012 CD14P08571 375 aa11.21□□□□□ -0.61
UPF1-208ENST00000600012 HLA-DOBP13765 273 aa11.21□□□□□ -0.61
UPF1-208ENST00000600012 HIST1H1CP16403 213 aaKnown RBP11.21□□□□□ -0.61
UPF1-208ENST00000600012 NOS3P29474 1203 aa11.21□□□□□ -0.61
UPF1-208ENST00000600012 CD79BP40259 229 aa11.21□□□□□ -0.61
UPF1-208ENST00000600012 EIF1AXP47813 144 aaKnown RBP11.21□□□□□ -0.61
UPF1-208ENST00000600012 P2RY4P51582 365 aa11.21□□□□□ -0.61
UPF1-208ENST00000600012 CLDN15P56746 228 aa11.21□□□□□ -0.61
UPF1-208ENST00000600012 SNRPGP62308 76 aaKnown RBP11.21□□□□□ -0.61
UPF1-208ENST00000600012 DBPQ10586 325 aaPredicted RBP11.21□□□□□ -0.61
UPF1-208ENST00000600012 MELKQ14680 651 aa11.21□□□□□ -0.61
UPF1-208ENST00000600012 MS4A18Q3C1V0 323 aa11.21□□□□□ -0.61
UPF1-208ENST00000600012 HBMQ6B0K9 141 aa11.21□□□□□ -0.61
UPF1-208ENST00000600012 ESPNLQ6ZVH7 1005 aa11.21□□□□□ -0.61
UPF1-208ENST00000600012 FAM122BQ7Z309 247 aa11.21□□□□□ -0.61
UPF1-208ENST00000600012 ADPRHL1Q8NDY3 354 aa11.21□□□□□ -0.61
UPF1-208ENST00000600012 SDR9C7Q8NEX9 313 aa11.21□□□□□ -0.61
UPF1-208ENST00000600012 BPIFB6Q8NFQ5 453 aa11.21□□□□□ -0.61
UPF1-208ENST00000600012 OR8J1Q8NGP2 316 aa11.21□□□□□ -0.61
UPF1-208ENST00000600012 TMEM163Q8TC26 289 aa11.21□□□□□ -0.61
UPF1-208ENST00000600012 HDAC2Q92769 488 aaKnown RBP11.21□□□□□ -0.61
UPF1-208ENST00000600012 COX4I2Q96KJ9 171 aa11.21□□□□□ -0.61
UPF1-208ENST00000600012 RHNO1Q9BSD3 238 aa11.21□□□□□ -0.61
UPF1-208ENST00000600012 MED20Q9H944 212 aa11.21□□□□□ -0.61
UPF1-208ENST00000600012 HINT3Q9NQE9 182 aaKnown RBP11.21□□□□□ -0.61
UPF1-208ENST00000600012 CMC2Q9NRP2 79 aa11.21□□□□□ -0.61
UPF1-208ENST00000600012 TRAPPC4Q9Y296 219 aa11.21□□□□□ -0.61
UPF1-208ENST00000600012 MYRFQ9Y2G1 1151 aa11.21□□□□□ -0.61
UPF1-208ENST00000600012 RAI1Q7Z5J4 1906 aaPredicted RBP11.21□□□□□ -0.62
UPF1-208ENST00000600012 HIVEP2P31629 2446 aa11.2□□□□□ -0.62
UPF1-208ENST00000600012 ROS1P08922 2347 aa11.2□□□□□ -0.62
UPF1-208ENST00000600012 AQP7P3A6NL99 342 aa11.2□□□□□ -0.62
UPF1-208ENST00000600012 RIIAD1A6NNX1 92 aa11.2□□□□□ -0.62
UPF1-208ENST00000600012 DEFB108AA8MXU0 73 aa11.2□□□□□ -0.62
UPF1-208ENST00000600012 IMPA2O14732 288 aa11.2□□□□□ -0.62
UPF1-208ENST00000600012 ARPC3O15145 178 aa11.2□□□□□ -0.62
UPF1-208ENST00000600012 SIAH2O43255 324 aa11.2□□□□□ -0.62
UPF1-208ENST00000600012 MPZL2O60487 215 aa11.2□□□□□ -0.62
UPF1-208ENST00000600012 FAM20BO75063 409 aa11.2□□□□□ -0.62
UPF1-208ENST00000600012 ENTPD6O75354 484 aa11.2□□□□□ -0.62
UPF1-208ENST00000600012 TNFAIP8O95379 198 aa11.2□□□□□ -0.62
UPF1-208ENST00000600012 CRYGSP22914 178 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms