RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 GLTPQ9NZD2 209 aa16.98■□□□□ 0.31
PNKP-207ENST00000596014 GRHPRQ9UBQ7 328 aa16.98■□□□□ 0.31
PNKP-207ENST00000596014 PCDHGB5Q9Y5G0 923 aa16.98■□□□□ 0.31
PNKP-207ENST00000596014 MAGED1Q9Y5V3 778 aaPredicted RBP16.98■□□□□ 0.31
PNKP-207ENST00000596014 UNC79Q9P2D8 2635 aa16.98■□□□□ 0.31
PNKP-207ENST00000596014 VGLL3A8MV65 326 aa16.97■□□□□ 0.31
PNKP-207ENST00000596014 TRMUO75648 421 aaKnown RBP16.97■□□□□ 0.31
PNKP-207ENST00000596014 RAD51DO75771 328 aa16.97■□□□□ 0.31
PNKP-207ENST00000596014 TNFAIP8O95379 198 aa16.97■□□□□ 0.31
PNKP-207ENST00000596014 CDH2P19022 906 aaPredicted RBP16.97■□□□□ 0.31
PNKP-207ENST00000596014 GSTM3P21266 225 aa16.97■□□□□ 0.31
PNKP-207ENST00000596014 ACVR1BP36896 505 aa16.97■□□□□ 0.31
PNKP-207ENST00000596014 GABRA6Q16445 453 aa16.97■□□□□ 0.31
PNKP-207ENST00000596014 HIST3H3Q16695 136 aa16.97■□□□□ 0.31
PNKP-207ENST00000596014 RASSF6Q6ZTQ3 369 aa16.97■□□□□ 0.31
PNKP-207ENST00000596014 FAM122BQ7Z309 247 aa16.97■□□□□ 0.31
PNKP-207ENST00000596014 ARIH2OSQ8N7S6 290 aa16.97■□□□□ 0.31
PNKP-207ENST00000596014 SYT14Q8NB59 555 aa16.97■□□□□ 0.31
PNKP-207ENST00000596014 ZNF519Q8TB69 540 aa16.97■□□□□ 0.31
PNKP-207ENST00000596014 FAM222BQ8WU58 562 aa16.97■□□□□ 0.31
PNKP-207ENST00000596014 HDAC2Q92769 488 aaKnown RBP16.97■□□□□ 0.31
PNKP-207ENST00000596014 SAMD8Q96LT4 415 aa16.97■□□□□ 0.31
PNKP-207ENST00000596014 Q96M85 177 aa16.97■□□□□ 0.31
PNKP-207ENST00000596014 USB1Q9BQ65 265 aaKnown RBP16.97■□□□□ 0.31
PNKP-207ENST00000596014 MED18Q9BUE0 208 aa16.97■□□□□ 0.31
PNKP-207ENST00000596014 ZNF696Q9H7X3 374 aa16.97■□□□□ 0.31
PNKP-207ENST00000596014 B3GAT2Q9NPZ5 323 aa16.97■□□□□ 0.31
PNKP-207ENST00000596014 SMPD3Q9NY59 655 aaPredicted RBP16.97■□□□□ 0.31
PNKP-207ENST00000596014 IL20Q9NYY1 176 aa16.97■□□□□ 0.31
PNKP-207ENST00000596014 KCNN3Q9UGI6 736 aa16.97■□□□□ 0.31
PNKP-207ENST00000596014 CENPBD1B2RD01 187 aa16.97■□□□□ 0.31
PNKP-207ENST00000596014 EPXP11678 715 aa16.97■□□□□ 0.31
PNKP-207ENST00000596014 SLC6A6P31641 620 aa16.97■□□□□ 0.31
PNKP-207ENST00000596014 CLRN1P58418 232 aa16.97■□□□□ 0.31
PNKP-207ENST00000596014 COX10Q12887 443 aa16.97■□□□□ 0.31
PNKP-207ENST00000596014 CEACAM16Q2WEN9 425 aa16.97■□□□□ 0.31
PNKP-207ENST00000596014 FAM205BPQ63HN1 556 aa16.97■□□□□ 0.31
PNKP-207ENST00000596014 ZNF787Q6DD87 383 aa16.97■□□□□ 0.31
PNKP-207ENST00000596014 OR7E24Q6IFN5 339 aa16.97■□□□□ 0.31
PNKP-207ENST00000596014 LRFN4Q6PJG9 635 aa16.97■□□□□ 0.31
PNKP-207ENST00000596014 CD300LDQ6UXZ3 194 aa16.97■□□□□ 0.31
PNKP-207ENST00000596014 OR5K1Q8NHB7 308 aa16.97■□□□□ 0.31
PNKP-207ENST00000596014 ULBP2Q9BZM5 246 aa16.97■□□□□ 0.31
PNKP-207ENST00000596014 EGLN3Q9H6Z9 239 aa16.97■□□□□ 0.31
PNKP-207ENST00000596014 CDH10Q9Y6N8 788 aa16.97■□□□□ 0.31
PNKP-207ENST00000596014 ABCA4P78363 2273 aa16.97■□□□□ 0.31
PNKP-207ENST00000596014 SETXQ7Z333 2677 aaKnown RBP16.96■□□□□ 0.31
PNKP-207ENST00000596014 A6NIZ1 184 aa16.96■□□□□ 0.31
PNKP-207ENST00000596014 RAP1BP61224 184 aa16.96■□□□□ 0.31
PNKP-207ENST00000596014 RAP1AP62834 184 aa16.96■□□□□ 0.31
PNKP-207ENST00000596014 DAG1Q14118 895 aa16.96■□□□□ 0.31
PNKP-207ENST00000596014 GPR139Q6DWJ6 353 aa16.96■□□□□ 0.31
PNKP-207ENST00000596014 RPL13AP3Q6NVV1 102 aa16.96■□□□□ 0.31
PNKP-207ENST00000596014 C1orf162Q8NEQ5 155 aaPredicted RBP16.96■□□□□ 0.31
PNKP-207ENST00000596014 NOXO1Q8NFA2 376 aa16.96■□□□□ 0.31
PNKP-207ENST00000596014 TFAP2CQ92754 450 aa16.96■□□□□ 0.31
PNKP-207ENST00000596014 ZC3HAV1LQ96H79 300 aaKnown RBP16.96■□□□□ 0.31
PNKP-207ENST00000596014 KCNK17Q96T54 332 aa16.96■□□□□ 0.31
PNKP-207ENST00000596014 IER3IP1Q9Y5U9 82 aa16.96■□□□□ 0.31
PNKP-207ENST00000596014 OR5H1A6NKK0 313 aa16.95■□□□□ 0.3
PNKP-207ENST00000596014 G3V2T6 193 aa16.95■□□□□ 0.3
PNKP-207ENST00000596014 ARHGEF9O43307 516 aa16.95■□□□□ 0.3
PNKP-207ENST00000596014 PPP1R3DO95685 299 aa16.95■□□□□ 0.3
PNKP-207ENST00000596014 TP53P04637 393 aaPredicted RBP16.95■□□□□ 0.3
PNKP-207ENST00000596014 THBDP07204 575 aa16.95■□□□□ 0.3
PNKP-207ENST00000596014 QDPRP09417 244 aa16.95■□□□□ 0.3
PNKP-207ENST00000596014 APEHP13798 732 aaKnown RBP16.95■□□□□ 0.3
PNKP-207ENST00000596014 ANXA8P13928 327 aa16.95■□□□□ 0.3
PNKP-207ENST00000596014 RPS6KA3P51812 740 aa16.95■□□□□ 0.3
PNKP-207ENST00000596014 SH3BGRP55822 239 aaPredicted RBP16.95■□□□□ 0.3
PNKP-207ENST00000596014 ARF1P84077 181 aaKnown RBP16.95■□□□□ 0.3
PNKP-207ENST00000596014 STK11Q15831 433 aa16.95■□□□□ 0.3
PNKP-207ENST00000596014 TIMM23BQ5SRD1 257 aa16.95■□□□□ 0.3
PNKP-207ENST00000596014 P2RY8Q86VZ1 359 aa16.95■□□□□ 0.3
PNKP-207ENST00000596014 HIPK1Q86Z02 1210 aa16.95■□□□□ 0.3
PNKP-207ENST00000596014 SVOPLQ8N434 492 aa16.95■□□□□ 0.3
PNKP-207ENST00000596014 CLDN22Q8N7P3 220 aa16.95■□□□□ 0.3
PNKP-207ENST00000596014 OR1K1Q8NGR3 316 aa16.95■□□□□ 0.3
PNKP-207ENST00000596014 MAGEE2Q8TD90 523 aaPredicted RBP16.95■□□□□ 0.3
PNKP-207ENST00000596014 HSD17B8Q92506 261 aa16.95■□□□□ 0.3
PNKP-207ENST00000596014 MCHR2Q969V1 340 aa16.95■□□□□ 0.3
PNKP-207ENST00000596014 IFT27Q9BW83 186 aa16.95■□□□□ 0.3
PNKP-207ENST00000596014 PLA2G12AQ9BZM1 189 aa16.95■□□□□ 0.3
PNKP-207ENST00000596014 IGFBP1P08833 259 aaPredicted RBP16.94■□□□□ 0.3
PNKP-207ENST00000596014 SDHAP31040 664 aa16.94■□□□□ 0.3
PNKP-207ENST00000596014 TAB1Q15750 504 aa16.94■□□□□ 0.3
PNKP-207ENST00000596014 KRT80Q6KB66 452 aa16.94■□□□□ 0.3
PNKP-207ENST00000596014 KLHL17Q6TDP4 642 aa16.94■□□□□ 0.3
PNKP-207ENST00000596014 ATG16L2Q8NAA4 619 aa16.94■□□□□ 0.3
PNKP-207ENST00000596014 MARVELD3Q96A59 401 aa16.94■□□□□ 0.3
PNKP-207ENST00000596014 RASD2Q96D21 266 aa16.94■□□□□ 0.3
PNKP-207ENST00000596014 NMD3Q96D46 503 aaKnown RBP16.94■□□□□ 0.3
PNKP-207ENST00000596014 BOD1Q96IK1 185 aa16.94■□□□□ 0.3
PNKP-207ENST00000596014 ERMAPQ96PL5 475 aaPredicted RBP16.94■□□□□ 0.3
PNKP-207ENST00000596014 ALG12Q9BV10 488 aa16.94■□□□□ 0.3
PNKP-207ENST00000596014 ZNF556Q9HAH1 456 aa16.94■□□□□ 0.3
PNKP-207ENST00000596014 ZNF226Q9NYT6 803 aa16.94■□□□□ 0.3
PNKP-207ENST00000596014 TEX13CA0A0J9YWL9 993 aa16.94■□□□□ 0.3
PNKP-207ENST00000596014 ZNF99A8MXY4 864 aaPredicted RBP16.94■□□□□ 0.3
PNKP-207ENST00000596014 CASKO14936 926 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms