RNA–Protein interactions for RNA: ENST00000595028.1

TRIM28-205, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 486 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-205ENST00000595028 DHHO43323 396 aa13.1□□□□□ -0.31
TRIM28-205ENST00000595028 PDE5AO76074 875 aa13.1□□□□□ -0.31
TRIM28-205ENST00000595028 SAGP10523 405 aaPredicted RBP13.1□□□□□ -0.31
TRIM28-205ENST00000595028 CD79AP11912 226 aa13.1□□□□□ -0.31
TRIM28-205ENST00000595028 HSD17B1P14061 328 aa13.1□□□□□ -0.31
TRIM28-205ENST00000595028 MAKP20794 623 aa13.1□□□□□ -0.31
TRIM28-205ENST00000595028 ACVR1BP36896 505 aa13.1□□□□□ -0.31
TRIM28-205ENST00000595028 PRKCDQ05655 676 aa13.1□□□□□ -0.31
TRIM28-205ENST00000595028 RUNX1T1Q06455 604 aa13.1□□□□□ -0.31
TRIM28-205ENST00000595028 HIST3H3Q16695 136 aa13.1□□□□□ -0.31
TRIM28-205ENST00000595028 ALG10Q5BKT4 473 aa13.1□□□□□ -0.31
TRIM28-205ENST00000595028 SAMD4BQ5PRF9 694 aaKnown RBP13.1□□□□□ -0.31
TRIM28-205ENST00000595028 ARMC4Q5T2S8 1044 aa13.1□□□□□ -0.31
TRIM28-205ENST00000595028 GLYATQ6IB77 296 aa13.1□□□□□ -0.31
TRIM28-205ENST00000595028 ZNF730Q6ZMV8 503 aa13.1□□□□□ -0.31
TRIM28-205ENST00000595028 DNM1P46Q6ZS02 220 aa13.1□□□□□ -0.31
TRIM28-205ENST00000595028 MBOAT2Q6ZWT7 520 aa13.1□□□□□ -0.31
TRIM28-205ENST00000595028 PIWIL3Q7Z3Z3 882 aaKnown RBP13.1□□□□□ -0.31
TRIM28-205ENST00000595028 CYP4Z1Q86W10 505 aa13.1□□□□□ -0.31
TRIM28-205ENST00000595028 FAM86B1Q8N7N1 296 aa13.1□□□□□ -0.31
TRIM28-205ENST00000595028 ANKS4BQ8N8V4 417 aa13.1□□□□□ -0.31
TRIM28-205ENST00000595028 NUP37Q8NFH4 326 aa13.1□□□□□ -0.31
TRIM28-205ENST00000595028 OR4F15Q8NGB8 312 aa13.1□□□□□ -0.31
TRIM28-205ENST00000595028 ZNF347Q96SE7 839 aa13.1□□□□□ -0.31
TRIM28-205ENST00000595028 MRPL13Q9BYD1 178 aaKnown RBP13.1□□□□□ -0.31
TRIM28-205ENST00000595028 ANKRD19PQ9H560 264 aa13.1□□□□□ -0.31
TRIM28-205ENST00000595028 DCAF13Q9NV06 445 aaKnown RBP13.1□□□□□ -0.31
TRIM28-205ENST00000595028 MAGEL2Q9UJ55 1249 aa13.1□□□□□ -0.31
TRIM28-205ENST00000595028 A0A087WUU8 490 aa13.09□□□□□ -0.31
TRIM28-205ENST00000595028 INAFM1C9JVW0 142 aa13.09□□□□□ -0.31
TRIM28-205ENST00000595028 ENTPD5O75356 428 aa13.09□□□□□ -0.31
TRIM28-205ENST00000595028 GMNNO75496 209 aa13.09□□□□□ -0.31
TRIM28-205ENST00000595028 TRMUO75648 421 aaKnown RBP13.09□□□□□ -0.31
TRIM28-205ENST00000595028 UBL3O95164 117 aa13.09□□□□□ -0.31
TRIM28-205ENST00000595028 RAB36O95755 333 aa13.09□□□□□ -0.31
TRIM28-205ENST00000595028 IGHMP01871 453 aa13.09□□□□□ -0.31
TRIM28-205ENST00000595028 QDPRP09417 244 aa13.09□□□□□ -0.31
TRIM28-205ENST00000595028 BMP4P12644 408 aa13.09□□□□□ -0.31
TRIM28-205ENST00000595028 TCN1P20061 433 aaPredicted RBP13.09□□□□□ -0.31
TRIM28-205ENST00000595028 GIPRP48546 466 aa13.09□□□□□ -0.31
TRIM28-205ENST00000595028 SLC9A3P48764 834 aa13.09□□□□□ -0.31
TRIM28-205ENST00000595028 SNRPD2P62316 118 aaKnown RBP13.09□□□□□ -0.31
TRIM28-205ENST00000595028 HGFACQ04756 655 aa13.09□□□□□ -0.31
TRIM28-205ENST00000595028 CHRNB3Q05901 458 aa13.09□□□□□ -0.31
TRIM28-205ENST00000595028 TNK1Q13470 666 aa13.09□□□□□ -0.31
TRIM28-205ENST00000595028 TOP3AQ13472 1001 aaPredicted RBP13.09□□□□□ -0.31
TRIM28-205ENST00000595028 MEX3DQ86XN8 651 aaKnown RBP13.09□□□□□ -0.31
TRIM28-205ENST00000595028 RNF113BQ8IZP6 322 aaKnown RBP13.09□□□□□ -0.31
TRIM28-205ENST00000595028 SLC22A24Q8N4F4 322 aa13.09□□□□□ -0.31
TRIM28-205ENST00000595028 MCHR2Q969V1 340 aa13.09□□□□□ -0.31
TRIM28-205ENST00000595028 FBXO17Q96EF6 278 aa13.09□□□□□ -0.31
TRIM28-205ENST00000595028 MS4A3Q96HJ5 214 aa13.09□□□□□ -0.31
TRIM28-205ENST00000595028 ZNF75AQ96N20 296 aa13.09□□□□□ -0.31
TRIM28-205ENST00000595028 CCT8L2Q96SF2 557 aa13.09□□□□□ -0.31
TRIM28-205ENST00000595028 TXNIPQ9H3M7 391 aa13.09□□□□□ -0.31
TRIM28-205ENST00000595028 DENND2DQ9H6A0 471 aaPredicted RBP13.09□□□□□ -0.31
TRIM28-205ENST00000595028 ZNF442Q9H7R0 627 aa13.09□□□□□ -0.31
TRIM28-205ENST00000595028 GORASP2Q9H8Y8 452 aa13.09□□□□□ -0.31
TRIM28-205ENST00000595028 NMNAT1Q9HAN9 279 aaPredicted RBP13.09□□□□□ -0.31
TRIM28-205ENST00000595028 NDE1Q9NXR1 346 aa13.09□□□□□ -0.31
TRIM28-205ENST00000595028 TRAV27A0A087WT01 109 aa13.08□□□□□ -0.32
TRIM28-205ENST00000595028 EFCAB9A8MZ26 197 aa13.08□□□□□ -0.32
TRIM28-205ENST00000595028 H1F0P07305 194 aaKnown RBP13.08□□□□□ -0.32
TRIM28-205ENST00000595028 OR8G3PP0DMU2 310 aa13.08□□□□□ -0.32
TRIM28-205ENST00000595028 NR2C1P13056 603 aa13.08□□□□□ -0.32
TRIM28-205ENST00000595028 ACADSP16219 412 aa13.08□□□□□ -0.32
TRIM28-205ENST00000595028 ZNF14P17017 642 aaPredicted RBP13.08□□□□□ -0.32
TRIM28-205ENST00000595028 SERPINF1P36955 418 aa13.08□□□□□ -0.32
TRIM28-205ENST00000595028 GPR4P46093 362 aa13.08□□□□□ -0.32
TRIM28-205ENST00000595028 PTDSS1P48651 473 aaKnown RBP13.08□□□□□ -0.32
TRIM28-205ENST00000595028 ZNF133P52736 654 aaPredicted RBP13.08□□□□□ -0.32
TRIM28-205ENST00000595028 NUDT6P53370 316 aa13.08□□□□□ -0.32
TRIM28-205ENST00000595028 MYBPC1Q00872 1141 aa13.08□□□□□ -0.32
TRIM28-205ENST00000595028 PIGFQ07326 219 aa13.08□□□□□ -0.32
TRIM28-205ENST00000595028 FHL1Q13642 323 aa13.08□□□□□ -0.32
TRIM28-205ENST00000595028 LAPTM4AQ15012 233 aa13.08□□□□□ -0.32
TRIM28-205ENST00000595028 TAF11Q15544 211 aa13.08□□□□□ -0.32
TRIM28-205ENST00000595028 ADIPOQQ15848 244 aa13.08□□□□□ -0.32
TRIM28-205ENST00000595028 SWI5Q1ZZU3 235 aa13.08□□□□□ -0.32
TRIM28-205ENST00000595028 MST1LQ2TV78 715 aa13.08□□□□□ -0.32
TRIM28-205ENST00000595028 ANKDD1AQ495B1 522 aa13.08□□□□□ -0.32
TRIM28-205ENST00000595028 NRN1LQ496H8 165 aa13.08□□□□□ -0.32
TRIM28-205ENST00000595028 C10orf128Q5T292 105 aa13.08□□□□□ -0.32
TRIM28-205ENST00000595028 VHLLQ6RSH7 139 aa13.08□□□□□ -0.32
TRIM28-205ENST00000595028 C16orf89Q6UX73 402 aa13.08□□□□□ -0.32
TRIM28-205ENST00000595028 SKA3Q8IX90 412 aa13.08□□□□□ -0.32
TRIM28-205ENST00000595028 LRRC75AQ8NAA5 344 aa13.08□□□□□ -0.32
TRIM28-205ENST00000595028 SYT14Q8NB59 555 aa13.08□□□□□ -0.32
TRIM28-205ENST00000595028 IL17RDQ8NFM7 739 aa13.08□□□□□ -0.32
TRIM28-205ENST00000595028 OR13C2Q8NGS9 318 aa13.08□□□□□ -0.32
TRIM28-205ENST00000595028 SLC7A13Q8TCU3 470 aa13.08□□□□□ -0.32
TRIM28-205ENST00000595028 HTRA1Q92743 480 aa13.08□□□□□ -0.32
TRIM28-205ENST00000595028 NMD3Q96D46 503 aaKnown RBP13.08□□□□□ -0.32
TRIM28-205ENST00000595028 C7orf34Q96L11 122 aa13.08□□□□□ -0.32
TRIM28-205ENST00000595028 NDUFAF4Q9P032 175 aa13.08□□□□□ -0.32
TRIM28-205ENST00000595028 CD300AQ9UGN4 299 aa13.08□□□□□ -0.32
TRIM28-205ENST00000595028 FBXL3Q9UKT7 428 aa13.08□□□□□ -0.32
TRIM28-205ENST00000595028 V9GYQ6 96 aa13.08□□□□□ -0.32
TRIM28-205ENST00000595028 CUBNO60494 3623 aa13.08□□□□□ -0.32
TRIM28-205ENST00000595028 A0A1W2PRQ8 180 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms