RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 ERCC1P07992 297 aaPredicted RBP15.39■□□□□ 0.05
SHKBP1-204ENST00000594862 QDPRP09417 244 aa15.39■□□□□ 0.05
SHKBP1-204ENST00000594862 HSD17B1P14061 328 aa15.39■□□□□ 0.05
SHKBP1-204ENST00000594862 ITGA2P17301 1181 aa15.39■□□□□ 0.05
SHKBP1-204ENST00000594862 EFNA4P52798 201 aa15.39■□□□□ 0.05
SHKBP1-204ENST00000594862 RPS23P62266 143 aaKnown RBP15.39■□□□□ 0.05
SHKBP1-204ENST00000594862 PRKCDQ05655 676 aa15.39■□□□□ 0.05
SHKBP1-204ENST00000594862 HIST3H3Q16695 136 aa15.39■□□□□ 0.05
SHKBP1-204ENST00000594862 SWI5Q1ZZU3 235 aa15.39■□□□□ 0.05
SHKBP1-204ENST00000594862 SLC36A2Q495M3 483 aa15.39■□□□□ 0.05
SHKBP1-204ENST00000594862 SAMD4BQ5PRF9 694 aaKnown RBP15.39■□□□□ 0.05
SHKBP1-204ENST00000594862 GLYATQ6IB77 296 aa15.39■□□□□ 0.05
SHKBP1-204ENST00000594862 C16orf89Q6UX73 402 aa15.39■□□□□ 0.05
SHKBP1-204ENST00000594862 MBOAT2Q6ZWT7 520 aa15.39■□□□□ 0.05
SHKBP1-204ENST00000594862 PIGWQ7Z7B1 504 aa15.39■□□□□ 0.05
SHKBP1-204ENST00000594862 NRMQ8IXM6 262 aa15.39■□□□□ 0.05
SHKBP1-204ENST00000594862 CIARTQ8N365 385 aaPredicted RBP15.39■□□□□ 0.05
SHKBP1-204ENST00000594862 ANKS4BQ8N8V4 417 aa15.39■□□□□ 0.05
SHKBP1-204ENST00000594862 FBXO17Q96EF6 278 aa15.39■□□□□ 0.05
SHKBP1-204ENST00000594862 ALG12Q9BV10 488 aa15.39■□□□□ 0.05
SHKBP1-204ENST00000594862 MRPL13Q9BYD1 178 aaKnown RBP15.39■□□□□ 0.05
SHKBP1-204ENST00000594862 TXNIPQ9H3M7 391 aa15.39■□□□□ 0.05
SHKBP1-204ENST00000594862 MYOZ1Q9NP98 299 aaPredicted RBP15.39■□□□□ 0.05
SHKBP1-204ENST00000594862 MAN2C1Q9NTJ4 1040 aa15.39■□□□□ 0.05
SHKBP1-204ENST00000594862 GMPR2Q9P2T1 348 aaKnown RBP15.39■□□□□ 0.05
SHKBP1-204ENST00000594862 GDF2Q9UK05 429 aaPredicted RBP15.39■□□□□ 0.05
SHKBP1-204ENST00000594862 ZNF503-AS2A6NEH8 195 aa15.38■□□□□ 0.05
SHKBP1-204ENST00000594862 A6NIZ1 184 aa15.38■□□□□ 0.05
SHKBP1-204ENST00000594862 EFCAB9A8MZ26 197 aa15.38■□□□□ 0.05
SHKBP1-204ENST00000594862 SSX4O60224 188 aa15.38■□□□□ 0.05
SHKBP1-204ENST00000594862 PIP5K1CO60331 668 aa15.38■□□□□ 0.05
SHKBP1-204ENST00000594862 PTHP01270 115 aa15.38■□□□□ 0.05
SHKBP1-204ENST00000594862 IGHMP01871 453 aa15.38■□□□□ 0.05
SHKBP1-204ENST00000594862 CELA3BP08861 270 aa15.38■□□□□ 0.05
SHKBP1-204ENST00000594862 OR4A8P0C604 315 aa15.38■□□□□ 0.05
SHKBP1-204ENST00000594862 NPR2P20594 1047 aa15.38■□□□□ 0.05
SHKBP1-204ENST00000594862 CALCRP30988 508 aa15.38■□□□□ 0.05
SHKBP1-204ENST00000594862 YAP1P46937 504 aaKnown RBP15.38■□□□□ 0.05
SHKBP1-204ENST00000594862 PTDSS1P48651 473 aaKnown RBP15.38■□□□□ 0.05
SHKBP1-204ENST00000594862 ZNF133P52736 654 aaPredicted RBP15.38■□□□□ 0.05
SHKBP1-204ENST00000594862 RAP1BP61224 184 aa15.38■□□□□ 0.05
SHKBP1-204ENST00000594862 RAB1AP62820 205 aa15.38■□□□□ 0.05
SHKBP1-204ENST00000594862 RAP1AP62834 184 aa15.38■□□□□ 0.05
SHKBP1-204ENST00000594862 GALK2Q01415 458 aa15.38■□□□□ 0.05
SHKBP1-204ENST00000594862 DAG1Q14118 895 aa15.38■□□□□ 0.05
SHKBP1-204ENST00000594862 ADIPOQQ15848 244 aa15.38■□□□□ 0.05
SHKBP1-204ENST00000594862 FXNQ16595 210 aa15.38■□□□□ 0.05
SHKBP1-204ENST00000594862 C10orf128Q5T292 105 aa15.38■□□□□ 0.05
SHKBP1-204ENST00000594862 ARMC4Q5T2S8 1044 aa15.38■□□□□ 0.05
SHKBP1-204ENST00000594862 TMEM53Q6P2H8 277 aa15.38■□□□□ 0.05
SHKBP1-204ENST00000594862 LRFN4Q6PJG9 635 aa15.38■□□□□ 0.05
SHKBP1-204ENST00000594862 FAM156AQ8NDB6 213 aa15.38■□□□□ 0.05
SHKBP1-204ENST00000594862 MCHR2Q969V1 340 aa15.38■□□□□ 0.05
SHKBP1-204ENST00000594862 REG4Q9BYZ8 158 aa15.38■□□□□ 0.05
SHKBP1-204ENST00000594862 GORASP2Q9H8Y8 452 aa15.38■□□□□ 0.05
SHKBP1-204ENST00000594862 NOX3Q9HBY0 568 aa15.38■□□□□ 0.05
SHKBP1-204ENST00000594862 DCAF13Q9NV06 445 aaKnown RBP15.38■□□□□ 0.05
SHKBP1-204ENST00000594862 A0A1W2PRQ8 180 aa15.37■□□□□ 0.05
SHKBP1-204ENST00000594862 FFAR1O14842 300 aa15.37■□□□□ 0.05
SHKBP1-204ENST00000594862 NDUFS7O75251 213 aa15.37■□□□□ 0.05
SHKBP1-204ENST00000594862 TRMUO75648 421 aaKnown RBP15.37■□□□□ 0.05
SHKBP1-204ENST00000594862 PRSS23O95084 383 aa15.37■□□□□ 0.05
SHKBP1-204ENST00000594862 LY6G6DO95868 133 aa15.37■□□□□ 0.05
SHKBP1-204ENST00000594862 H1F0P07305 194 aaKnown RBP15.37■□□□□ 0.05
SHKBP1-204ENST00000594862 SLC25A16P16260 332 aa15.37■□□□□ 0.05
SHKBP1-204ENST00000594862 NCK1P16333 377 aa15.37■□□□□ 0.05
SHKBP1-204ENST00000594862 ZNF14P17017 642 aaPredicted RBP15.37■□□□□ 0.05
SHKBP1-204ENST00000594862 RHCEP18577 417 aa15.37■□□□□ 0.05
SHKBP1-204ENST00000594862 GIPRP48546 466 aa15.37■□□□□ 0.05
SHKBP1-204ENST00000594862 PPOXP50336 477 aa15.37■□□□□ 0.05
SHKBP1-204ENST00000594862 SNTB2Q13425 540 aaKnown RBP15.37■□□□□ 0.05
SHKBP1-204ENST00000594862 DGCR6Q14129 220 aa15.37■□□□□ 0.05
SHKBP1-204ENST00000594862 KRT72Q14CN4 511 aa15.37■□□□□ 0.05
SHKBP1-204ENST00000594862 VHLLQ6RSH7 139 aa15.37■□□□□ 0.05
SHKBP1-204ENST00000594862 TMPRSS11FQ6ZWK6 438 aa15.37■□□□□ 0.05
SHKBP1-204ENST00000594862 OAFQ86UD1 273 aa15.37■□□□□ 0.05
SHKBP1-204ENST00000594862 WDFY1Q8IWB7 410 aa15.37■□□□□ 0.05
SHKBP1-204ENST00000594862 MOSPD2Q8NHP6 518 aa15.37■□□□□ 0.05
SHKBP1-204ENST00000594862 SMR3AQ99954 134 aa15.37■□□□□ 0.05
SHKBP1-204ENST00000594862 KCNN2Q9H2S1 579 aa15.37■□□□□ 0.05
SHKBP1-204ENST00000594862 PLK3Q9H4B4 646 aa15.37■□□□□ 0.05
SHKBP1-204ENST00000594862 SEC61A2Q9H9S3 476 aa15.37■□□□□ 0.05
SHKBP1-204ENST00000594862 NMNAT1Q9HAN9 279 aaPredicted RBP15.37■□□□□ 0.05
SHKBP1-204ENST00000594862 RHCGQ9UBD6 479 aa15.37■□□□□ 0.05
SHKBP1-204ENST00000594862 EGFL7Q9UHF1 273 aa15.37■□□□□ 0.05
SHKBP1-204ENST00000594862 SNX13Q9Y5W8 968 aa15.37■□□□□ 0.05
SHKBP1-204ENST00000594862 SLC22A23A1A5C7 686 aa15.36■□□□□ 0.05
SHKBP1-204ENST00000594862 RNF223E7ERA6 249 aa15.36■□□□□ 0.05
SHKBP1-204ENST00000594862 J3KTA2 159 aa15.36■□□□□ 0.05
SHKBP1-204ENST00000594862 SERPINA5P05154 406 aa15.36■□□□□ 0.05
SHKBP1-204ENST00000594862 NR4A1P22736 598 aa15.36■□□□□ 0.05
SHKBP1-204ENST00000594862 GYS2P54840 703 aa15.36■□□□□ 0.05
SHKBP1-204ENST00000594862 SMIM11AP58511 58 aa15.36■□□□□ 0.05
SHKBP1-204ENST00000594862 RPL27P61353 136 aaKnown RBP15.36■□□□□ 0.05
SHKBP1-204ENST00000594862 MRPS34P82930 218 aaKnown RBP15.36■□□□□ 0.05
SHKBP1-204ENST00000594862 MXRA7P84157 204 aa15.36■□□□□ 0.05
SHKBP1-204ENST00000594862 HGFACQ04756 655 aa15.36■□□□□ 0.05
SHKBP1-204ENST00000594862 PIGFQ07326 219 aa15.36■□□□□ 0.05
SHKBP1-204ENST00000594862 CD47Q08722 323 aa15.36■□□□□ 0.05
SHKBP1-204ENST00000594862 GKAP1Q5VSY0 366 aaPredicted RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms