RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 TMEM129A0AVI4 362 aa11.39□□□□□ -0.59
H3F3B-213ENST00000593254 VWC2LB2RUY7 222 aa11.39□□□□□ -0.59
H3F3B-213ENST00000593254 NDUFS8O00217 210 aa11.39□□□□□ -0.59
H3F3B-213ENST00000593254 SPRY1O43609 319 aaPredicted RBP11.39□□□□□ -0.59
H3F3B-213ENST00000593254 SHOX2O60902 331 aaPredicted RBP11.39□□□□□ -0.59
H3F3B-213ENST00000593254 THRBP10828 461 aa11.39□□□□□ -0.59
H3F3B-213ENST00000593254 ZNF35P13682 527 aa11.39□□□□□ -0.59
H3F3B-213ENST00000593254 NPR2P20594 1047 aa11.39□□□□□ -0.59
H3F3B-213ENST00000593254 NR4A1P22736 598 aa11.39□□□□□ -0.59
H3F3B-213ENST00000593254 OR1E2P47887 323 aa11.39□□□□□ -0.59
H3F3B-213ENST00000593254 GIPRP48546 466 aa11.39□□□□□ -0.59
H3F3B-213ENST00000593254 PDLIM4P50479 330 aa11.39□□□□□ -0.59
H3F3B-213ENST00000593254 RAB1AP62820 205 aa11.39□□□□□ -0.59
H3F3B-213ENST00000593254 RPL18Q07020 188 aaKnown RBP11.39□□□□□ -0.59
H3F3B-213ENST00000593254 PIGFQ07326 219 aa11.39□□□□□ -0.59
H3F3B-213ENST00000593254 SNTB2Q13425 540 aaKnown RBP11.39□□□□□ -0.59
H3F3B-213ENST00000593254 DAG1Q14118 895 aa11.39□□□□□ -0.59
H3F3B-213ENST00000593254 LRRC23Q53EV4 343 aaPredicted RBP11.39□□□□□ -0.59
H3F3B-213ENST00000593254 CYBRD1Q53TN4 286 aa11.39□□□□□ -0.59
H3F3B-213ENST00000593254 KRT80Q6KB66 452 aa11.39□□□□□ -0.59
H3F3B-213ENST00000593254 LRFN4Q6PJG9 635 aa11.39□□□□□ -0.59
H3F3B-213ENST00000593254 ARPINQ7Z6K5 226 aa11.39□□□□□ -0.59
H3F3B-213ENST00000593254 MICU2Q8IYU8 434 aa11.39□□□□□ -0.59
H3F3B-213ENST00000593254 POU5F2Q8N7G0 328 aa11.39□□□□□ -0.59
H3F3B-213ENST00000593254 PFN4Q8NHR9 129 aa11.39□□□□□ -0.59
H3F3B-213ENST00000593254 RP9Q8TA86 221 aaKnown RBP11.39□□□□□ -0.59
H3F3B-213ENST00000593254 TMEM239Q8WW34 195 aa11.39□□□□□ -0.59
H3F3B-213ENST00000593254 LIPHQ8WWY8 451 aa11.39□□□□□ -0.59
H3F3B-213ENST00000593254 DOK1Q99704 481 aa11.39□□□□□ -0.59
H3F3B-213ENST00000593254 VRK1Q99986 396 aaPredicted RBP11.39□□□□□ -0.59
H3F3B-213ENST00000593254 MYOZ1Q9NP98 299 aaPredicted RBP11.39□□□□□ -0.59
H3F3B-213ENST00000593254 C20orf141Q9NUB4 165 aa11.39□□□□□ -0.59
H3F3B-213ENST00000593254 CMTM6Q9NX76 183 aa11.39□□□□□ -0.59
H3F3B-213ENST00000593254 LOC390937A0A1W2PQ73 354 aa11.38□□□□□ -0.59
H3F3B-213ENST00000593254 ELOVL7A1L3X0 281 aa11.38□□□□□ -0.59
H3F3B-213ENST00000593254 VSTM5A8MXK1 200 aa11.38□□□□□ -0.59
H3F3B-213ENST00000593254 BLOC1S5-TXNDC5H3BN57 136 aa11.38□□□□□ -0.59
H3F3B-213ENST00000593254 hCG_2039718K7EN88 272 aa11.38□□□□□ -0.59
H3F3B-213ENST00000593254 DHHO43323 396 aa11.38□□□□□ -0.59
H3F3B-213ENST00000593254 OR7A10O76100 309 aa11.38□□□□□ -0.59
H3F3B-213ENST00000593254 UBL3O95164 117 aa11.38□□□□□ -0.59
H3F3B-213ENST00000593254 RAB36O95755 333 aa11.38□□□□□ -0.59
H3F3B-213ENST00000593254 BCL10O95999 233 aa11.38□□□□□ -0.59
H3F3B-213ENST00000593254 IGHG1P01857 330 aa11.38□□□□□ -0.59
H3F3B-213ENST00000593254 TSPAN19P0C672 248 aa11.38□□□□□ -0.59
H3F3B-213ENST00000593254 FUT1P19526 365 aa11.38□□□□□ -0.59
H3F3B-213ENST00000593254 USF1P22415 310 aaPredicted RBP11.38□□□□□ -0.59
H3F3B-213ENST00000593254 MDH1P40925 334 aaKnown RBP11.38□□□□□ -0.59
H3F3B-213ENST00000593254 PTDSS1P48651 473 aaKnown RBP11.38□□□□□ -0.59
H3F3B-213ENST00000593254 SELENOWP63302 87 aa11.38□□□□□ -0.59
H3F3B-213ENST00000593254 HIST3H3Q16695 136 aa11.38□□□□□ -0.59
H3F3B-213ENST00000593254 FAM120AOSQ5T036 256 aa11.38□□□□□ -0.59
H3F3B-213ENST00000593254 THSD4Q6ZMP0 1018 aa11.38□□□□□ -0.59
H3F3B-213ENST00000593254 IL17RELQ6ZVW7 336 aa11.38□□□□□ -0.59
H3F3B-213ENST00000593254 SPATA21Q7Z572 469 aa11.38□□□□□ -0.59
H3F3B-213ENST00000593254 SKA3Q8IX90 412 aa11.38□□□□□ -0.59
H3F3B-213ENST00000593254 SVOPLQ8N434 492 aa11.38□□□□□ -0.59
H3F3B-213ENST00000593254 SLC22A24Q8N4F4 322 aa11.38□□□□□ -0.59
H3F3B-213ENST00000593254 ZDHHC16Q969W1 377 aa11.38□□□□□ -0.59
H3F3B-213ENST00000593254 SGTBQ96EQ0 304 aa11.38□□□□□ -0.59
H3F3B-213ENST00000593254 SEPHS2Q99611 448 aa11.38□□□□□ -0.59
H3F3B-213ENST00000593254 TMEM38BQ9NVV0 291 aa11.38□□□□□ -0.59
H3F3B-213ENST00000593254 FBXL3Q9UKT7 428 aa11.38□□□□□ -0.59
H3F3B-213ENST00000593254 AP3M1Q9Y2T2 418 aa11.38□□□□□ -0.59
H3F3B-213ENST00000593254 A0A1W2PRG6 482 aa11.37□□□□□ -0.59
H3F3B-213ENST00000593254 CENPBD1B2RD01 187 aa11.37□□□□□ -0.59
H3F3B-213ENST00000593254 KCNAB3O43448 404 aa11.37□□□□□ -0.59
H3F3B-213ENST00000593254 ENTPD5O75356 428 aa11.37□□□□□ -0.59
H3F3B-213ENST00000593254 F13BP05160 661 aa11.37□□□□□ -0.59
H3F3B-213ENST00000593254 IGFBP1P08833 259 aaPredicted RBP11.37□□□□□ -0.59
H3F3B-213ENST00000593254 QDPRP09417 244 aa11.37□□□□□ -0.59
H3F3B-213ENST00000593254 OR8G3PP0DMU2 310 aa11.37□□□□□ -0.59
H3F3B-213ENST00000593254 COX4I1P13073 169 aa11.37□□□□□ -0.59
H3F3B-213ENST00000593254 AQP2P41181 271 aa11.37□□□□□ -0.59
H3F3B-213ENST00000593254 NR4A2P43354 598 aa11.37□□□□□ -0.59
H3F3B-213ENST00000593254 MSMPQ1L6U9 139 aa11.37□□□□□ -0.59
H3F3B-213ENST00000593254 NRN1LQ496H8 165 aa11.37□□□□□ -0.59
H3F3B-213ENST00000593254 LIPNQ5VXI9 398 aa11.37□□□□□ -0.59
H3F3B-213ENST00000593254 HDDC2Q7Z4H3 204 aa11.37□□□□□ -0.59
H3F3B-213ENST00000593254 MEX3DQ86XN8 651 aaKnown RBP11.37□□□□□ -0.59
H3F3B-213ENST00000593254 ZNF584Q8IVC4 421 aa11.37□□□□□ -0.59
H3F3B-213ENST00000593254 SLC15A3Q8IY34 581 aa11.37□□□□□ -0.59
H3F3B-213ENST00000593254 CDK20Q8IZL9 346 aa11.37□□□□□ -0.59
H3F3B-213ENST00000593254 NOXO1Q8NFA2 376 aa11.37□□□□□ -0.59
H3F3B-213ENST00000593254 FGFBP3Q8TAT2 258 aa11.37□□□□□ -0.59
H3F3B-213ENST00000593254 ASB10Q8WXI3 467 aa11.37□□□□□ -0.59
H3F3B-213ENST00000593254 TPD52L3Q96J77 140 aa11.37□□□□□ -0.59
H3F3B-213ENST00000593254 PRRC1Q96M27 445 aa11.37□□□□□ -0.59
H3F3B-213ENST00000593254 PIMREGQ9BSJ6 248 aa11.37□□□□□ -0.59
H3F3B-213ENST00000593254 MRPL13Q9BYD1 178 aaKnown RBP11.37□□□□□ -0.59
H3F3B-213ENST00000593254 RAB1BQ9H0U4 201 aa11.37□□□□□ -0.59
H3F3B-213ENST00000593254 INIPQ9NRY2 104 aa11.37□□□□□ -0.59
H3F3B-213ENST00000593254 GMPR2Q9P2T1 348 aaKnown RBP11.37□□□□□ -0.59
H3F3B-213ENST00000593254 A4GNTQ9UNA3 340 aa11.37□□□□□ -0.59
H3F3B-213ENST00000593254 MED31Q9Y3C7 131 aa11.37□□□□□ -0.59
H3F3B-213ENST00000593254 CMAHPQ9Y471 501 aa11.37□□□□□ -0.59
H3F3B-213ENST00000593254 SPEF1Q9Y4P9 236 aa11.37□□□□□ -0.59
H3F3B-213ENST00000593254 NPIPB13A6NJU9 1138 aa11.36□□□□□ -0.59
H3F3B-213ENST00000593254 NPIPB4C9JG80 1138 aa11.36□□□□□ -0.59
H3F3B-213ENST00000593254 MCIDASD6RGH6 385 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms