RNA–Protein interactions for RNA: ENST00000593074.5

CLIP3-206, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIP3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-206ENST00000593074 HRH3Q9Y5N1 445 aa17.72■□□□□ 0.43
CLIP3-206ENST00000593074 IGLV3-32A0A0A0MS00 114 aa17.71■□□□□ 0.43
CLIP3-206ENST00000593074 IFITM5A6NNB3 132 aa17.71■□□□□ 0.43
CLIP3-206ENST00000593074 ZNF208O43345 1280 aa17.71■□□□□ 0.43
CLIP3-206ENST00000593074 SLC16A7O60669 478 aa17.71■□□□□ 0.43
CLIP3-206ENST00000593074 SLC43A1O75387 559 aa17.71■□□□□ 0.43
CLIP3-206ENST00000593074 CTLA4P16410 223 aa17.71■□□□□ 0.43
CLIP3-206ENST00000593074 IL11P20809 199 aa17.71■□□□□ 0.43
CLIP3-206ENST00000593074 MAGEB1P43366 347 aa17.71■□□□□ 0.43
CLIP3-206ENST00000593074 UBE2NLQ5JXB2 153 aa17.71■□□□□ 0.43
CLIP3-206ENST00000593074 BICRALQ6AI39 1079 aa17.71■□□□□ 0.43
CLIP3-206ENST00000593074 BAIAP2L2Q6UXY1 529 aa17.71■□□□□ 0.43
CLIP3-206ENST00000593074 GLCCI1Q86VQ1 547 aa17.71■□□□□ 0.43
CLIP3-206ENST00000593074 THEM6Q8WUY1 208 aa17.71■□□□□ 0.43
CLIP3-206ENST00000593074 ASB17Q8WXJ9 295 aa17.71■□□□□ 0.43
CLIP3-206ENST00000593074 MR1Q95460 341 aa17.71■□□□□ 0.43
CLIP3-206ENST00000593074 UPRTQ96BW1 309 aa17.71■□□□□ 0.43
CLIP3-206ENST00000593074 NXPE2Q96DL1 559 aa17.71■□□□□ 0.43
CLIP3-206ENST00000593074 ST6GAL2Q96JF0 529 aa17.71■□□□□ 0.43
CLIP3-206ENST00000593074 ARL5BQ96KC2 179 aa17.71■□□□□ 0.43
CLIP3-206ENST00000593074 MARVELD1Q9BSK0 173 aa17.71■□□□□ 0.43
CLIP3-206ENST00000593074 ARRDC1-AS1Q9H2J1 176 aa17.71■□□□□ 0.43
CLIP3-206ENST00000593074 KLRF1Q9NZS2 232 aa17.71■□□□□ 0.43
CLIP3-206ENST00000593074 NLKQ9UBE8 527 aa17.71■□□□□ 0.43
CLIP3-206ENST00000593074 TMEM212A6NML5 194 aa17.71■□□□□ 0.43
CLIP3-206ENST00000593074 ZNF254O75437 659 aa17.71■□□□□ 0.43
CLIP3-206ENST00000593074 GP1BAP07359 652 aa17.71■□□□□ 0.43
CLIP3-206ENST00000593074 MPLP40238 635 aa17.71■□□□□ 0.43
CLIP3-206ENST00000593074 PTGDSP41222 190 aa17.71■□□□□ 0.43
CLIP3-206ENST00000593074 FOXF1Q12946 379 aa17.71■□□□□ 0.43
CLIP3-206ENST00000593074 FDX2Q6P4F2 183 aa17.71■□□□□ 0.43
CLIP3-206ENST00000593074 ADAMTS14Q8WXS8 1223 aa17.71■□□□□ 0.43
CLIP3-206ENST00000593074 NSMAFQ92636 917 aa17.71■□□□□ 0.43
CLIP3-206ENST00000593074 OR8B4Q96RC9 309 aa17.71■□□□□ 0.43
CLIP3-206ENST00000593074 MRPL22Q9NWU5 206 aaKnown RBP17.71■□□□□ 0.43
CLIP3-206ENST00000593074 SLCO1C1Q9NYB5 712 aa17.71■□□□□ 0.43
CLIP3-206ENST00000593074 ING1Q9UK53 422 aaPredicted RBP17.71■□□□□ 0.43
CLIP3-206ENST00000593074 POU2F3Q9UKI9 436 aa17.71■□□□□ 0.43
CLIP3-206ENST00000593074 B3GALT1Q9Y5Z6 326 aa17.71■□□□□ 0.43
CLIP3-206ENST00000593074 NPIPB13A6NJU9 1138 aa17.7■□□□□ 0.42
CLIP3-206ENST00000593074 NPIPB4C9JG80 1138 aa17.7■□□□□ 0.42
CLIP3-206ENST00000593074 MS4A18H0YCH9 400 aa17.7■□□□□ 0.42
CLIP3-206ENST00000593074 ZNF593O00488 134 aaPredicted RBP17.7■□□□□ 0.42
CLIP3-206ENST00000593074 EEF1E1O43324 174 aaKnown RBP17.7■□□□□ 0.42
CLIP3-206ENST00000593074 ZNF432O94892 652 aa17.7■□□□□ 0.42
CLIP3-206ENST00000593074 FBXO45P0C2W1 286 aa17.7■□□□□ 0.42
CLIP3-206ENST00000593074 MSX1P28360 303 aa17.7■□□□□ 0.42
CLIP3-206ENST00000593074 SLC6A1P30531 599 aa17.7■□□□□ 0.42
CLIP3-206ENST00000593074 CCKBRP32239 447 aa17.7■□□□□ 0.42
CLIP3-206ENST00000593074 MMP15P51511 669 aa17.7■□□□□ 0.42
CLIP3-206ENST00000593074 RASGEF1BQ0VAM2 473 aa17.7■□□□□ 0.42
CLIP3-206ENST00000593074 MELKQ14680 651 aa17.7■□□□□ 0.42
CLIP3-206ENST00000593074 MS4A18Q3C1V0 323 aa17.7■□□□□ 0.42
CLIP3-206ENST00000593074 SLC25A53Q5H9E4 307 aa17.7■□□□□ 0.42
CLIP3-206ENST00000593074 TCEAL6Q6IPX3 200 aa17.7■□□□□ 0.42
CLIP3-206ENST00000593074 ZNF671Q8TAW3 534 aa17.7■□□□□ 0.42
CLIP3-206ENST00000593074 SLC22A8Q8TCC7 542 aa17.7■□□□□ 0.42
CLIP3-206ENST00000593074 RHBDD1Q8TEB9 315 aa17.7■□□□□ 0.42
CLIP3-206ENST00000593074 SLC7A6Q92536 515 aa17.7■□□□□ 0.42
CLIP3-206ENST00000593074 TCEAL3Q969E4 200 aa17.7■□□□□ 0.42
CLIP3-206ENST00000593074 PMEPA1Q969W9 287 aa17.7■□□□□ 0.42
CLIP3-206ENST00000593074 PPP4R1LQ9P1A2 415 aa17.7■□□□□ 0.42
CLIP3-206ENST00000593074 CLEC4AQ9UMR7 237 aa17.7■□□□□ 0.42
CLIP3-206ENST00000593074 VDAC3Q9Y277 283 aa17.7■□□□□ 0.42
CLIP3-206ENST00000593074 OR2J2O76002 312 aa17.7■□□□□ 0.42
CLIP3-206ENST00000593074 HLA-DQA2P01906 255 aa17.7■□□□□ 0.42
CLIP3-206ENST00000593074 ZNF883P0CG24 379 aa17.7■□□□□ 0.42
CLIP3-206ENST00000593074 HLA-DOBP13765 273 aa17.7■□□□□ 0.42
CLIP3-206ENST00000593074 ACP1P24666 158 aa17.7■□□□□ 0.42
CLIP3-206ENST00000593074 HLA-DMAP28067 261 aa17.7■□□□□ 0.42
CLIP3-206ENST00000593074 MAP2K6P52564 334 aa17.7■□□□□ 0.42
CLIP3-206ENST00000593074 PITPNAQ00169 270 aa17.7■□□□□ 0.42
CLIP3-206ENST00000593074 GPR176Q14439 515 aa17.7■□□□□ 0.42
CLIP3-206ENST00000593074 TATDN3Q17R31 274 aa17.7■□□□□ 0.42
CLIP3-206ENST00000593074 TBRG1Q3YBR2 411 aa17.7■□□□□ 0.42
CLIP3-206ENST00000593074 LRRC69Q6ZNQ3 347 aa17.7■□□□□ 0.42
CLIP3-206ENST00000593074 PRSS35Q8N3Z0 413 aa17.7■□□□□ 0.42
CLIP3-206ENST00000593074 DDIT4LQ96D03 193 aa17.7■□□□□ 0.42
CLIP3-206ENST00000593074 C4orf45Q96LM5 186 aa17.7■□□□□ 0.42
CLIP3-206ENST00000593074 DEFB126Q9BYW3 111 aa17.7■□□□□ 0.42
CLIP3-206ENST00000593074 ULBP3Q9BZM4 244 aa17.7■□□□□ 0.42
CLIP3-206ENST00000593074 COMMD4Q9H0A8 199 aa17.7■□□□□ 0.42
CLIP3-206ENST00000593074 MOV10Q9HCE1 1003 aaKnown RBP17.7■□□□□ 0.42
CLIP3-206ENST00000593074 WIF1Q9Y5W5 379 aa17.7■□□□□ 0.42
CLIP3-206ENST00000593074 V9GY05 133 aa17.7■□□□□ 0.42
CLIP3-206ENST00000593074 TRBV5-7A0A0A0MS05 114 aa17.69■□□□□ 0.42
CLIP3-206ENST00000593074 A0A1B0GTH9 108 aa17.69■□□□□ 0.42
CLIP3-206ENST00000593074 A6NIZ1 184 aa17.69■□□□□ 0.42
CLIP3-206ENST00000593074 DKK1O94907 266 aa17.69■□□□□ 0.42
CLIP3-206ENST00000593074 RAP1BP61224 184 aa17.69■□□□□ 0.42
CLIP3-206ENST00000593074 RAP1AP62834 184 aa17.69■□□□□ 0.42
CLIP3-206ENST00000593074 ROM1Q03395 351 aa17.69■□□□□ 0.42
CLIP3-206ENST00000593074 OR7A5Q15622 319 aa17.69■□□□□ 0.42
CLIP3-206ENST00000593074 NTRK2Q16620 822 aa17.69■□□□□ 0.42
CLIP3-206ENST00000593074 FAM69BQ5VUD6 431 aa17.69■□□□□ 0.42
CLIP3-206ENST00000593074 SLC18B1Q6NT16 456 aa17.69■□□□□ 0.42
CLIP3-206ENST00000593074 STAC2Q6ZMT1 411 aa17.69■□□□□ 0.42
CLIP3-206ENST00000593074 DBX2Q6ZNG2 339 aa17.69■□□□□ 0.42
CLIP3-206ENST00000593074 H1FNTQ75WM6 255 aaPredicted RBP17.69■□□□□ 0.42
CLIP3-206ENST00000593074 ZNF248Q8NDW4 579 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms