RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 SEZ6L2Q6UXD5 910 aa8.79□□□□□ -1
BRCA1-227ENST00000591849 TMPRSS11FQ6ZWK6 438 aa8.79□□□□□ -1
BRCA1-227ENST00000591849 MDP1Q86V88 176 aa8.79□□□□□ -1
BRCA1-227ENST00000591849 NOXO1Q8NFA2 376 aa8.79□□□□□ -1
BRCA1-227ENST00000591849 OR4K5Q8NGD3 323 aa8.79□□□□□ -1
BRCA1-227ENST00000591849 LILRB1Q8NHL6 650 aaPredicted RBP8.79□□□□□ -1
BRCA1-227ENST00000591849 SLC7A13Q8TCU3 470 aa8.79□□□□□ -1
BRCA1-227ENST00000591849 ASB10Q8WXI3 467 aa8.79□□□□□ -1
BRCA1-227ENST00000591849 POP5Q969H6 163 aaKnown RBP8.79□□□□□ -1
BRCA1-227ENST00000591849 MCHR2Q969V1 340 aa8.79□□□□□ -1
BRCA1-227ENST00000591849 CCDC124Q96CT7 223 aaKnown RBP8.79□□□□□ -1
BRCA1-227ENST00000591849 FAM46AQ96IP4 442 aaKnown RBP8.79□□□□□ -1
BRCA1-227ENST00000591849 DHRS9Q9BPW9 319 aa8.79□□□□□ -1
BRCA1-227ENST00000591849 C1orf21Q9H246 121 aa8.79□□□□□ -1
BRCA1-227ENST00000591849 TAS2R1Q9NYW7 299 aa8.79□□□□□ -1
BRCA1-227ENST00000591849 GRHPRQ9UBQ7 328 aa8.79□□□□□ -1
BRCA1-227ENST00000591849 ZNF346Q9UL40 294 aaKnown RBP8.79□□□□□ -1
BRCA1-227ENST00000591849 HIF3AQ9Y2N7 669 aa8.79□□□□□ -1
BRCA1-227ENST00000591849 PRRC2AP48634 2157 aaKnown RBP8.79□□□□□ -1
BRCA1-227ENST00000591849 CENPBD1B2RD01 187 aa8.78□□□□□ -1
BRCA1-227ENST00000591849 E7EQL1 145 aa8.78□□□□□ -1
BRCA1-227ENST00000591849 ATP6V1G2-DDX39BF2Z307 99 aa8.78□□□□□ -1
BRCA1-227ENST00000591849 PRSS23O95084 383 aa8.78□□□□□ -1
BRCA1-227ENST00000591849 UBL3O95164 117 aa8.78□□□□□ -1
BRCA1-227ENST00000591849 NDUFB2O95178 105 aa8.78□□□□□ -1
BRCA1-227ENST00000591849 CD99P14209 185 aa8.78□□□□□ -1
BRCA1-227ENST00000591849 FUT4P22083 530 aa8.78□□□□□ -1
BRCA1-227ENST00000591849 RRM2P31350 389 aa8.78□□□□□ -1
BRCA1-227ENST00000591849 PTDSS1P48651 473 aaKnown RBP8.78□□□□□ -1
BRCA1-227ENST00000591849 PTH2RP49190 550 aa8.78□□□□□ -1
BRCA1-227ENST00000591849 RAB1AP62820 205 aa8.78□□□□□ -1
BRCA1-227ENST00000591849 ERVK-25P63136 954 aa8.78□□□□□ -1
BRCA1-227ENST00000591849 PLP2Q04941 152 aa8.78□□□□□ -1
BRCA1-227ENST00000591849 ZNF544Q6NX49 715 aa8.78□□□□□ -1
BRCA1-227ENST00000591849 LRFN4Q6PJG9 635 aa8.78□□□□□ -1
BRCA1-227ENST00000591849 VHLLQ6RSH7 139 aa8.78□□□□□ -1
BRCA1-227ENST00000591849 SLC16A14Q7RTX9 510 aa8.78□□□□□ -1
BRCA1-227ENST00000591849 TSEN54Q7Z6J9 526 aaKnown RBP8.78□□□□□ -1
BRCA1-227ENST00000591849 WDFY1Q8IWB7 410 aa8.78□□□□□ -1
BRCA1-227ENST00000591849 LRRC75A-AS1Q8N1F1 130 aa8.78□□□□□ -1
BRCA1-227ENST00000591849 SLC22A24Q8N4F4 322 aa8.78□□□□□ -1
BRCA1-227ENST00000591849 FAM169BQ8N8A8 192 aa8.78□□□□□ -1
BRCA1-227ENST00000591849 IL17RDQ8NFM7 739 aa8.78□□□□□ -1
BRCA1-227ENST00000591849 OR4F15Q8NGB8 312 aa8.78□□□□□ -1
BRCA1-227ENST00000591849 FNDC8Q8TC99 324 aa8.78□□□□□ -1
BRCA1-227ENST00000591849 NSMAFQ92636 917 aa8.78□□□□□ -1
BRCA1-227ENST00000591849 RSRC1Q96IZ7 334 aaKnown RBP8.78□□□□□ -1
BRCA1-227ENST00000591849 ALG12Q9BV10 488 aa8.78□□□□□ -1
BRCA1-227ENST00000591849 KATNB1Q9BVA0 655 aa8.78□□□□□ -1
BRCA1-227ENST00000591849 CXXC4Q9H2H0 198 aa8.78□□□□□ -1
BRCA1-227ENST00000591849 SEC61A2Q9H9S3 476 aa8.78□□□□□ -1
BRCA1-227ENST00000591849 CCNB1IP1Q9NPC3 277 aa8.78□□□□□ -1
BRCA1-227ENST00000591849 IL1RAPQ9NPH3 570 aa8.78□□□□□ -1
BRCA1-227ENST00000591849 FBXL3Q9UKT7 428 aa8.78□□□□□ -1
BRCA1-227ENST00000591849 SPEF1Q9Y4P9 236 aa8.78□□□□□ -1
BRCA1-227ENST00000591849 ROS1P08922 2347 aa8.77□□□□□ -1
BRCA1-227ENST00000591849 SH3PXD2BA1X283 911 aa8.77□□□□□ -1.01
BRCA1-227ENST00000591849 NPIPB13A6NJU9 1138 aa8.77□□□□□ -1.01
BRCA1-227ENST00000591849 NPIPB4C9JG80 1138 aa8.77□□□□□ -1.01
BRCA1-227ENST00000591849 TNFRSF11BO00300 401 aa8.77□□□□□ -1.01
BRCA1-227ENST00000591849 GNGT2O14610 69 aa8.77□□□□□ -1.01
BRCA1-227ENST00000591849 KRT36O76013 467 aa8.77□□□□□ -1.01
BRCA1-227ENST00000591849 PTHP01270 115 aa8.77□□□□□ -1.01
BRCA1-227ENST00000591849 SOD3P08294 240 aa8.77□□□□□ -1.01
BRCA1-227ENST00000591849 CD14P08571 375 aa8.77□□□□□ -1.01
BRCA1-227ENST00000591849 CECR9P0C854 216 aa8.77□□□□□ -1.01
BRCA1-227ENST00000591849 ATP6V1B2P21281 511 aa8.77□□□□□ -1.01
BRCA1-227ENST00000591849 APOBEC3AP31941 199 aaPredicted RBP8.77□□□□□ -1.01
BRCA1-227ENST00000591849 TTKP33981 857 aa8.77□□□□□ -1.01
BRCA1-227ENST00000591849 CDKN1AP38936 164 aa8.77□□□□□ -1.01
BRCA1-227ENST00000591849 GIPRP48546 466 aa8.77□□□□□ -1.01
BRCA1-227ENST00000591849 RASSF2P50749 326 aa8.77□□□□□ -1.01
BRCA1-227ENST00000591849 RPS6KA3P51812 740 aa8.77□□□□□ -1.01
BRCA1-227ENST00000591849 MS4A2Q01362 244 aa8.77□□□□□ -1.01
BRCA1-227ENST00000591849 GALK2Q01415 458 aa8.77□□□□□ -1.01
BRCA1-227ENST00000591849 NAAAQ02083 359 aa8.77□□□□□ -1.01
BRCA1-227ENST00000591849 HSF2Q03933 536 aa8.77□□□□□ -1.01
BRCA1-227ENST00000591849 RUNX1T1Q06455 604 aa8.77□□□□□ -1.01
BRCA1-227ENST00000591849 TRAP1Q12931 704 aaKnown RBP8.77□□□□□ -1.01
BRCA1-227ENST00000591849 SEC23BQ15437 767 aa8.77□□□□□ -1.01
BRCA1-227ENST00000591849 KRTAP21-3Q3LHN1 58 aa8.77□□□□□ -1.01
BRCA1-227ENST00000591849 C3orf36Q3SXR2 165 aa8.77□□□□□ -1.01
BRCA1-227ENST00000591849 SLC36A2Q495M3 483 aa8.77□□□□□ -1.01
BRCA1-227ENST00000591849 Q5PR19 223 aa8.77□□□□□ -1.01
BRCA1-227ENST00000591849 THEM4Q5T1C6 240 aa8.77□□□□□ -1.01
BRCA1-227ENST00000591849 ARMC4Q5T2S8 1044 aa8.77□□□□□ -1.01
BRCA1-227ENST00000591849 GPR139Q6DWJ6 353 aa8.77□□□□□ -1.01
BRCA1-227ENST00000591849 LCN8Q6JVE9 175 aa8.77□□□□□ -1.01
BRCA1-227ENST00000591849 YTHDF3Q7Z739 585 aaKnown RBP8.77□□□□□ -1.01
BRCA1-227ENST00000591849 DPPA2Q7Z7J5 298 aa8.77□□□□□ -1.01
BRCA1-227ENST00000591849 TGIF2LYQ8IUE0 185 aa8.77□□□□□ -1.01
BRCA1-227ENST00000591849 SKA3Q8IX90 412 aa8.77□□□□□ -1.01
BRCA1-227ENST00000591849 MUC15Q8N387 334 aa8.77□□□□□ -1.01
BRCA1-227ENST00000591849 ARIH2OSQ8N7S6 290 aa8.77□□□□□ -1.01
BRCA1-227ENST00000591849 GNPDA2Q8TDQ7 276 aa8.77□□□□□ -1.01
BRCA1-227ENST00000591849 HDAC2Q92769 488 aaKnown RBP8.77□□□□□ -1.01
BRCA1-227ENST00000591849 ASB9Q96DX5 294 aa8.77□□□□□ -1.01
BRCA1-227ENST00000591849 CLPTM1LQ96KA5 538 aa8.77□□□□□ -1.01
BRCA1-227ENST00000591849 ZNF570Q96NI8 536 aa8.77□□□□□ -1.01
BRCA1-227ENST00000591849 SH3GL3Q99963 347 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms