RNA–Protein interactions for RNA: ENST00000591126.5

SMAD4-212, Transcript of SMAD family member 4, humanhuman

TSL 1 (best)

Gene SMAD4, Length 4,970 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-212ENST00000591126 ROR2Q01974 943 aaKnown RBP5.71□□□□□ -1.5
SMAD4-212ENST00000591126 ZFP36L1Q07352 338 aaKnown RBP5.71□□□□□ -1.5
SMAD4-212ENST00000591126 SHBQ15464 509 aa5.71□□□□□ -1.5
SMAD4-212ENST00000591126 PRAMEF9Q5VWM5 478 aa5.71□□□□□ -1.5
SMAD4-212ENST00000591126 AWAT2Q6E213 333 aa5.71□□□□□ -1.5
SMAD4-212ENST00000591126 RPL22L1Q6P5R6 122 aaKnown RBP5.71□□□□□ -1.5
SMAD4-212ENST00000591126 TUBA3EQ6PEY2 450 aa5.71□□□□□ -1.5
SMAD4-212ENST00000591126 MEPCEQ7L2J0 689 aaKnown RBP5.71□□□□□ -1.5
SMAD4-212ENST00000591126 DPY19L4Q7Z388 723 aa5.71□□□□□ -1.5
SMAD4-212ENST00000591126 TSPYL5Q86VY4 417 aaPredicted RBP5.71□□□□□ -1.5
SMAD4-212ENST00000591126 MARCH9Q86YJ5 346 aa5.71□□□□□ -1.5
SMAD4-212ENST00000591126 FAM26EQ8N5C1 309 aa5.71□□□□□ -1.5
SMAD4-212ENST00000591126 LRRC17Q8N6Y2 441 aa5.71□□□□□ -1.5
SMAD4-212ENST00000591126 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.71□□□□□ -1.5
SMAD4-212ENST00000591126 SAMD8Q96LT4 415 aa5.71□□□□□ -1.5
SMAD4-212ENST00000591126 S1PR3Q99500 378 aa5.71□□□□□ -1.5
SMAD4-212ENST00000591126 C12orf65Q9H3J6 166 aaKnown RBP5.71□□□□□ -1.5
SMAD4-212ENST00000591126 GAL3ST2Q9H3Q3 398 aa5.71□□□□□ -1.5
SMAD4-212ENST00000591126 SIAEQ9HAT2 523 aa5.71□□□□□ -1.5
SMAD4-212ENST00000591126 ACKR4Q9NPB9 350 aa5.71□□□□□ -1.5
SMAD4-212ENST00000591126 TMEM74BQ9NUR3 256 aa5.71□□□□□ -1.5
SMAD4-212ENST00000591126 DCAF13Q9NV06 445 aaKnown RBP5.71□□□□□ -1.5
SMAD4-212ENST00000591126 COPS3Q9UNS2 423 aa5.71□□□□□ -1.5
SMAD4-212ENST00000591126 KIR2DS1A0A191URI9 304 aa5.7□□□□□ -1.5
SMAD4-212ENST00000591126 SH2D7A6NKC9 451 aaPredicted RBP5.7□□□□□ -1.5
SMAD4-212ENST00000591126 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.7□□□□□ -1.5
SMAD4-212ENST00000591126 SPINT1O43278 529 aa5.7□□□□□ -1.5
SMAD4-212ENST00000591126 RGS9O75916 674 aaPredicted RBP5.7□□□□□ -1.5
SMAD4-212ENST00000591126 ARNTP27540 789 aa5.7□□□□□ -1.5
SMAD4-212ENST00000591126 KIR2DS4P43632 304 aa5.7□□□□□ -1.5
SMAD4-212ENST00000591126 ZNF81P51508 661 aa5.7□□□□□ -1.5
SMAD4-212ENST00000591126 RPS4XP62701 263 aaKnown RBP5.7□□□□□ -1.5
SMAD4-212ENST00000591126 ERVK-25P63136 954 aa5.7□□□□□ -1.5
SMAD4-212ENST00000591126 KIR2DS1Q14954 304 aa5.7□□□□□ -1.5
SMAD4-212ENST00000591126 DUSP5Q16690 384 aa5.7□□□□□ -1.5
SMAD4-212ENST00000591126 GAB4Q2WGN9 574 aa5.7□□□□□ -1.5
SMAD4-212ENST00000591126 NHSL2Q5HYW2 709 aa5.7□□□□□ -1.5
SMAD4-212ENST00000591126 NKAPLQ5M9Q1 402 aa5.7□□□□□ -1.5
SMAD4-212ENST00000591126 BPIFB2Q8N4F0 458 aa5.7□□□□□ -1.5
SMAD4-212ENST00000591126 SYT14Q8NB59 555 aa5.7□□□□□ -1.5
SMAD4-212ENST00000591126 OR10D3Q8NH80 312 aa5.7□□□□□ -1.5
SMAD4-212ENST00000591126 CCL19Q99731 98 aa5.7□□□□□ -1.5
SMAD4-212ENST00000591126 DGCR6LQ9BY27 220 aa5.7□□□□□ -1.5
SMAD4-212ENST00000591126 TTTY12Q9BZ98 90 aa5.7□□□□□ -1.5
SMAD4-212ENST00000591126 MARCH7Q9H992 704 aa5.7□□□□□ -1.5
SMAD4-212ENST00000591126 FSCN3Q9NQT6 498 aa5.7□□□□□ -1.5
SMAD4-212ENST00000591126 SNTG1Q9NSN8 517 aa5.7□□□□□ -1.5
SMAD4-212ENST00000591126 ZNFX1Q9P2E3 1918 aaKnown RBP5.7□□□□□ -1.5
SMAD4-212ENST00000591126 CCDC182A6NF36 153 aa5.7□□□□□ -1.5
SMAD4-212ENST00000591126 PSMD9O00233 223 aa5.7□□□□□ -1.5
SMAD4-212ENST00000591126 GREM1O60565 184 aa5.7□□□□□ -1.5
SMAD4-212ENST00000591126 APEHP13798 732 aaKnown RBP5.7□□□□□ -1.5
SMAD4-212ENST00000591126 GPX2P18283 190 aa5.7□□□□□ -1.5
SMAD4-212ENST00000591126 CDK2P24941 298 aa5.7□□□□□ -1.5
SMAD4-212ENST00000591126 ALDH3B1P43353 468 aa5.7□□□□□ -1.5
SMAD4-212ENST00000591126 SRPXP78539 464 aa5.7□□□□□ -1.5
SMAD4-212ENST00000591126 EBPQ15125 230 aaKnown RBP5.7□□□□□ -1.5
SMAD4-212ENST00000591126 ZNF141Q15928 474 aa5.7□□□□□ -1.5
SMAD4-212ENST00000591126 TBR1Q16650 682 aa5.7□□□□□ -1.5
SMAD4-212ENST00000591126 CCDC144NLQ6NUI1 221 aa5.7□□□□□ -1.5
SMAD4-212ENST00000591126 RPUSD3Q6P087 351 aaKnown RBP5.7□□□□□ -1.5
SMAD4-212ENST00000591126 ARIH2OSQ8N7S6 290 aa5.7□□□□□ -1.5
SMAD4-212ENST00000591126 ADPRHL1Q8NDY3 354 aa5.7□□□□□ -1.5
SMAD4-212ENST00000591126 OR56B1Q8NGI3 324 aa5.7□□□□□ -1.5
SMAD4-212ENST00000591126 KLHL31Q9H511 634 aa5.7□□□□□ -1.5
SMAD4-212ENST00000591126 ZNF286AQ9HBT8 521 aa5.7□□□□□ -1.5
SMAD4-212ENST00000591126 SLC52A3Q9NQ40 469 aa5.7□□□□□ -1.5
SMAD4-212ENST00000591126 LANCL2Q9NS86 450 aa5.7□□□□□ -1.5
SMAD4-212ENST00000591126 AASSQ9UDR5 926 aa5.7□□□□□ -1.5
SMAD4-212ENST00000591126 GREB1LQ9C091 1923 aaPredicted RBP5.7□□□□□ -1.5
SMAD4-212ENST00000591126 MICAL3Q7RTP6 2002 aa5.7□□□□□ -1.5
SMAD4-212ENST00000591126 OTOL1A6NHN0 477 aaPredicted RBP5.7□□□□□ -1.5
SMAD4-212ENST00000591126 ZNF99A8MXY4 864 aaPredicted RBP5.7□□□□□ -1.5
SMAD4-212ENST00000591126 ACOT8O14734 319 aa5.7□□□□□ -1.5
SMAD4-212ENST00000591126 SLC22A1O15245 554 aa5.7□□□□□ -1.5
SMAD4-212ENST00000591126 LCMT2O60294 686 aaKnown RBP5.7□□□□□ -1.5
SMAD4-212ENST00000591126 ATP6V1G2O95670 118 aa5.7□□□□□ -1.5
SMAD4-212ENST00000591126 MYF5P13349 255 aa5.7□□□□□ -1.5
SMAD4-212ENST00000591126 GZMKP49863 264 aa5.7□□□□□ -1.5
SMAD4-212ENST00000591126 PHC1P78364 1004 aa5.7□□□□□ -1.5
SMAD4-212ENST00000591126 PMPCAQ10713 525 aa5.7□□□□□ -1.5
SMAD4-212ENST00000591126 FUT7Q11130 342 aa5.7□□□□□ -1.5
SMAD4-212ENST00000591126 EIF4EBP2Q13542 120 aaPredicted RBP5.7□□□□□ -1.5
SMAD4-212ENST00000591126 SSX1Q16384 188 aa5.7□□□□□ -1.5
SMAD4-212ENST00000591126 NDUFA5Q16718 116 aa5.7□□□□□ -1.5
SMAD4-212ENST00000591126 XKR7Q5GH72 579 aa5.7□□□□□ -1.5
SMAD4-212ENST00000591126 VASNQ6EMK4 673 aa5.7□□□□□ -1.5
SMAD4-212ENST00000591126 ZNF322Q6U7Q0 402 aaPredicted RBP5.7□□□□□ -1.5
SMAD4-212ENST00000591126 FAM214BQ7L5A3 538 aa5.7□□□□□ -1.5
SMAD4-212ENST00000591126 MARVELD2Q8N4S9 558 aa5.7□□□□□ -1.5
SMAD4-212ENST00000591126 OR5D16Q8NGK9 328 aa5.7□□□□□ -1.5
SMAD4-212ENST00000591126 LRRC20Q8TCA0 184 aa5.7□□□□□ -1.5
SMAD4-212ENST00000591126 RNF128Q8TEB7 428 aa5.7□□□□□ -1.5
SMAD4-212ENST00000591126 SLC38A5Q8WUX1 472 aa5.7□□□□□ -1.5
SMAD4-212ENST00000591126 EDARADDQ8WWZ3 215 aa5.7□□□□□ -1.5
SMAD4-212ENST00000591126 ZNF395Q9H8N7 513 aaPredicted RBP5.7□□□□□ -1.5
SMAD4-212ENST00000591126 FBXO34Q9NWN3 711 aa5.7□□□□□ -1.5
SMAD4-212ENST00000591126 DNAJB12Q9NXW2 375 aaKnown RBP5.7□□□□□ -1.5
SMAD4-212ENST00000591126 COPZ2Q9P299 210 aa5.7□□□□□ -1.5
SMAD4-212ENST00000591126 GNG12Q9UBI6 72 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms