RNA–Protein interactions for RNA: ENST00000589941.1

SMAD4-209, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-209ENST00000589941 SLC2A12Q8TD20 617 aa6.8□□□□□ -1.32
SMAD4-209ENST00000589941 UTP15Q8TED0 518 aaKnown RBP6.8□□□□□ -1.32
SMAD4-209ENST00000589941 CTHRC1Q96CG8 243 aa6.8□□□□□ -1.32
SMAD4-209ENST00000589941 C11orf24Q96F05 449 aaPredicted RBP6.8□□□□□ -1.32
SMAD4-209ENST00000589941 CACNG6Q9BXT2 260 aa6.8□□□□□ -1.32
SMAD4-209ENST00000589941 ITPAQ9BY32 194 aa6.8□□□□□ -1.32
SMAD4-209ENST00000589941 MS4A7Q9GZW8 240 aaPredicted RBP6.8□□□□□ -1.32
SMAD4-209ENST00000589941 EHD1Q9H4M9 534 aa6.8□□□□□ -1.32
SMAD4-209ENST00000589941 KLHL31Q9H511 634 aa6.8□□□□□ -1.32
SMAD4-209ENST00000589941 PCNX3Q9H6A9 2034 aa6.8□□□□□ -1.32
SMAD4-209ENST00000589941 SIAEQ9HAT2 523 aa6.8□□□□□ -1.32
SMAD4-209ENST00000589941 MOV10Q9HCE1 1003 aaKnown RBP6.8□□□□□ -1.32
SMAD4-209ENST00000589941 TMEM184CQ9NVA4 438 aa6.8□□□□□ -1.32
SMAD4-209ENST00000589941 FAM120CQ9NX05 1096 aaKnown RBP6.8□□□□□ -1.32
SMAD4-209ENST00000589941 NPAP1Q9NZP6 1156 aa6.8□□□□□ -1.32
SMAD4-209ENST00000589941 PSORS1C1Q9UIG5 152 aa6.8□□□□□ -1.32
SMAD4-209ENST00000589941 ZNF490Q9ULM2 529 aaPredicted RBP6.8□□□□□ -1.32
SMAD4-209ENST00000589941 ABCG2Q9UNQ0 655 aa6.8□□□□□ -1.32
SMAD4-209ENST00000589941 TRAPPC4Q9Y296 219 aa6.8□□□□□ -1.32
SMAD4-209ENST00000589941 IFT52Q9Y366 437 aa6.8□□□□□ -1.32
SMAD4-209ENST00000589941 GMPPBQ9Y5P6 360 aa6.8□□□□□ -1.32
SMAD4-209ENST00000589941 SACSQ9NZJ4 4579 aa6.79□□□□□ -1.32
SMAD4-209ENST00000589941 A0A0G2JN53 185 aa6.79□□□□□ -1.32
SMAD4-209ENST00000589941 ZAR1LA6NP61 321 aa6.79□□□□□ -1.32
SMAD4-209ENST00000589941 LINC00473A8K010 186 aa6.79□□□□□ -1.32
SMAD4-209ENST00000589941 HCRTR2O43614 444 aa6.79□□□□□ -1.32
SMAD4-209ENST00000589941 UGDHO60701 494 aa6.79□□□□□ -1.32
SMAD4-209ENST00000589941 PSIP1O75475 530 aaKnown RBP6.79□□□□□ -1.32
SMAD4-209ENST00000589941 ETHE1O95571 254 aa6.79□□□□□ -1.32
SMAD4-209ENST00000589941 TGFAP01135 160 aa6.79□□□□□ -1.32
SMAD4-209ENST00000589941 FABP3P05413 133 aa6.79□□□□□ -1.32
SMAD4-209ENST00000589941 SERPIND1P05546 499 aa6.79□□□□□ -1.32
SMAD4-209ENST00000589941 MPC1LP0DKB6 136 aa6.79□□□□□ -1.32
SMAD4-209ENST00000589941 TBXA2RP21731 343 aa6.79□□□□□ -1.32
SMAD4-209ENST00000589941 S100A1P23297 94 aa6.79□□□□□ -1.32
SMAD4-209ENST00000589941 FMO3P31513 532 aa6.79□□□□□ -1.32
SMAD4-209ENST00000589941 KDELR2P33947 212 aa6.79□□□□□ -1.32
SMAD4-209ENST00000589941 GGT2P36268 569 aa6.79□□□□□ -1.32
SMAD4-209ENST00000589941 CDKN2CP42773 168 aa6.79□□□□□ -1.32
SMAD4-209ENST00000589941 VBP1P61758 197 aa6.79□□□□□ -1.32
SMAD4-209ENST00000589941 NCS1P62166 190 aa6.79□□□□□ -1.32
SMAD4-209ENST00000589941 HMGCS1Q01581 520 aa6.79□□□□□ -1.32
SMAD4-209ENST00000589941 NPRL3Q12980 569 aa6.79□□□□□ -1.32
SMAD4-209ENST00000589941 KRR1Q13601 381 aaKnown RBP6.79□□□□□ -1.32
SMAD4-209ENST00000589941 E2F2Q14209 437 aa6.79□□□□□ -1.32
SMAD4-209ENST00000589941 ARHGAP19Q14CB8 494 aa6.79□□□□□ -1.32
SMAD4-209ENST00000589941 TOMM20Q15388 145 aa6.79□□□□□ -1.32
SMAD4-209ENST00000589941 KCNJ8Q15842 424 aa6.79□□□□□ -1.32
SMAD4-209ENST00000589941 PAGE2BQ5JRK9 111 aa6.79□□□□□ -1.32
SMAD4-209ENST00000589941 C11orf71Q6IPW1 123 aa6.79□□□□□ -1.32
SMAD4-209ENST00000589941 MBOAT1Q6ZNC8 495 aa6.79□□□□□ -1.32
SMAD4-209ENST00000589941 USP43Q70EL4 1123 aa6.79□□□□□ -1.32
SMAD4-209ENST00000589941 ADCK1Q86TW2 530 aa6.79□□□□□ -1.32
SMAD4-209ENST00000589941 DTX2Q86UW9 622 aa6.79□□□□□ -1.32
SMAD4-209ENST00000589941 ENTHD1Q8IYW4 607 aa6.79□□□□□ -1.32
SMAD4-209ENST00000589941 KRTCAP2Q8N6L1 136 aa6.79□□□□□ -1.32
SMAD4-209ENST00000589941 OR8J2Q8NGG1 315 aa6.79□□□□□ -1.32
SMAD4-209ENST00000589941 OR4C15Q8NGM1 316 aa6.79□□□□□ -1.32
SMAD4-209ENST00000589941 OR56A3Q8NH54 315 aa6.79□□□□□ -1.32
SMAD4-209ENST00000589941 DOK4Q8TEW6 326 aa6.79□□□□□ -1.32
SMAD4-209ENST00000589941 FAM216AQ8WUB2 273 aa6.79□□□□□ -1.32
SMAD4-209ENST00000589941 PYCR2Q96C36 320 aa6.79□□□□□ -1.32
SMAD4-209ENST00000589941 APIPQ96GX9 242 aa6.79□□□□□ -1.32
SMAD4-209ENST00000589941 MOGAT1Q96PD6 335 aa6.79□□□□□ -1.32
SMAD4-209ENST00000589941 INPP5KQ9BT40 448 aa6.79□□□□□ -1.32
SMAD4-209ENST00000589941 HOXD1Q9GZZ0 328 aa6.79□□□□□ -1.32
SMAD4-209ENST00000589941 TMEM165Q9HC07 324 aa6.79□□□□□ -1.32
SMAD4-209ENST00000589941 FARSBQ9NSD9 589 aaKnown RBP6.79□□□□□ -1.32
SMAD4-209ENST00000589941 ELOVL5Q9NYP7 299 aa6.79□□□□□ -1.32
SMAD4-209ENST00000589941 WWOXQ9NZC7 414 aa6.79□□□□□ -1.32
SMAD4-209ENST00000589941 BTNL2Q9UIR0 455 aa6.79□□□□□ -1.32
SMAD4-209ENST00000589941 DLGAP4Q9Y2H0 992 aa6.79□□□□□ -1.32
SMAD4-209ENST00000589941 MMACHCQ9Y4U1 282 aa6.79□□□□□ -1.32
SMAD4-209ENST00000589941 DNAH3Q8TD57 4116 aa6.78□□□□□ -1.32
SMAD4-209ENST00000589941 A0A075B6Q4 140 aa6.78□□□□□ -1.32
SMAD4-209ENST00000589941 ARRDC5A6NEK1 342 aa6.78□□□□□ -1.32
SMAD4-209ENST00000589941 EFCAB9A8MZ26 197 aa6.78□□□□□ -1.32
SMAD4-209ENST00000589941 PTGES3LE9PB15 166 aa6.78□□□□□ -1.32
SMAD4-209ENST00000589941 RAMP1O60894 148 aa6.78□□□□□ -1.32
SMAD4-209ENST00000589941 STK16O75716 305 aa6.78□□□□□ -1.32
SMAD4-209ENST00000589941 KCNK2O95069 426 aa6.78□□□□□ -1.32
SMAD4-209ENST00000589941 CLDN9O95484 217 aa6.78□□□□□ -1.32
SMAD4-209ENST00000589941 CDK1P06493 297 aa6.78□□□□□ -1.32
SMAD4-209ENST00000589941 NR2F6P10588 404 aa6.78□□□□□ -1.32
SMAD4-209ENST00000589941 CPN1P15169 458 aa6.78□□□□□ -1.32
SMAD4-209ENST00000589941 CD36P16671 472 aa6.78□□□□□ -1.32
SMAD4-209ENST00000589941 PRPS1L1P21108 318 aa6.78□□□□□ -1.32
SMAD4-209ENST00000589941 PPIBP23284 216 aaKnown RBP6.78□□□□□ -1.32
SMAD4-209ENST00000589941 PSMB9P28065 219 aa6.78□□□□□ -1.32
SMAD4-209ENST00000589941 PPIFP30405 207 aaKnown RBP6.78□□□□□ -1.32
SMAD4-209ENST00000589941 IL2RGP31785 369 aa6.78□□□□□ -1.32
SMAD4-209ENST00000589941 PCGF2P35227 344 aa6.78□□□□□ -1.32
SMAD4-209ENST00000589941 GSSP48637 474 aa6.78□□□□□ -1.32
SMAD4-209ENST00000589941 LHX2P50458 406 aa6.78□□□□□ -1.32
SMAD4-209ENST00000589941 ARHGDIAP52565 204 aa6.78□□□□□ -1.32
SMAD4-209ENST00000589941 CRYBA2P53672 197 aa6.78□□□□□ -1.32
SMAD4-209ENST00000589941 CLDN18P56856 261 aa6.78□□□□□ -1.32
SMAD4-209ENST00000589941 RPP38P78345 283 aaKnown RBP6.78□□□□□ -1.32
SMAD4-209ENST00000589941 LGALS3BPQ08380 585 aa6.78□□□□□ -1.32
SMAD4-209ENST00000589941 CSTF3Q12996 717 aaKnown RBP6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms