RNA–Protein interactions for RNA: ENST00000586900.1

PKN1-208, Transcript of protein kinase N1, human

TSL 3

Gene PKN1, Length 550 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKN1-208	ENST00000586900	COX6B1	P14854	86 aa		10.83	□□□□□ -0.68
PKN1-208	ENST00000586900	PAX7	P23759	505 aa		10.83	□□□□□ -0.68
PKN1-208	ENST00000586900	DAP	P51397	102 aa		10.83	□□□□□ -0.68
PKN1-208	ENST00000586900	CEACAM16	Q2WEN9	425 aa		10.83	□□□□□ -0.68
PKN1-208	ENST00000586900	MEST	Q5EB52	335 aa		10.83	□□□□□ -0.68
PKN1-208	ENST00000586900	TIMM23B	Q5SRD1	257 aa		10.83	□□□□□ -0.68
PKN1-208	ENST00000586900	C10orf128	Q5T292	105 aa		10.83	□□□□□ -0.68
PKN1-208	ENST00000586900	KDM4D	Q6B0I6	523 aa		10.83	□□□□□ -0.68
PKN1-208	ENST00000586900	ANKRD16	Q6P6B7	361 aa		10.83	□□□□□ -0.68
PKN1-208	ENST00000586900	PQLC1	Q8N2U9	271 aa		10.83	□□□□□ -0.68
PKN1-208	ENST00000586900	LNX2	Q8N448	690 aa		10.83	□□□□□ -0.68
PKN1-208	ENST00000586900	OR1K1	Q8NGR3	316 aa		10.83	□□□□□ -0.68
PKN1-208	ENST00000586900	LINC01560	Q8TB33	94 aa		10.83	□□□□□ -0.68
PKN1-208	ENST00000586900	MCHR2	Q969V1	340 aa		10.83	□□□□□ -0.68
PKN1-208	ENST00000586900	S100PBP	Q96BU1	408 aa		10.83	□□□□□ -0.68
PKN1-208	ENST00000586900	WFIKKN1	Q96NZ8	548 aa		10.83	□□□□□ -0.68
PKN1-208	ENST00000586900	ERMAP	Q96PL5	475 aa	Predicted RBP	10.83	□□□□□ -0.68
PKN1-208	ENST00000586900	TSSK6	Q9BXA6	273 aa		10.83	□□□□□ -0.68
PKN1-208	ENST00000586900	PLA2G12A	Q9BZM1	189 aa		10.83	□□□□□ -0.68
PKN1-208	ENST00000586900	VSX1	Q9NZR4	365 aa	Predicted RBP	10.83	□□□□□ -0.68
PKN1-208	ENST00000586900	KIF17	Q9P2E2	1029 aa		10.83	□□□□□ -0.68
PKN1-208	ENST00000586900	ENOPH1	Q9UHY7	261 aa		10.83	□□□□□ -0.68
PKN1-208	ENST00000586900	OAZ3	Q9UMX2	235 aa		10.83	□□□□□ -0.68
PKN1-208	ENST00000586900	POFUT2	Q9Y2G5	429 aa		10.83	□□□□□ -0.68
PKN1-208	ENST00000586900	TEX13C	A0A0J9YWL9	993 aa		10.82	□□□□□ -0.68
PKN1-208	ENST00000586900	SLC22A23	A1A5C7	686 aa		10.82	□□□□□ -0.68
PKN1-208	ENST00000586900	PRSS37	A4D1T9	235 aa		10.82	□□□□□ -0.68
PKN1-208	ENST00000586900	ARHGEF9	O43307	516 aa		10.82	□□□□□ -0.68
PKN1-208	ENST00000586900	RAD51D	O75771	328 aa		10.82	□□□□□ -0.68
PKN1-208	ENST00000586900	NOS3	P29474	1203 aa		10.82	□□□□□ -0.68
PKN1-208	ENST00000586900	ZNF84	P51523	738 aa		10.82	□□□□□ -0.68
PKN1-208	ENST00000586900	ESRRG	P62508	458 aa		10.82	□□□□□ -0.68
PKN1-208	ENST00000586900	ARF1	P84077	181 aa	Known RBP	10.82	□□□□□ -0.68
PKN1-208	ENST00000586900	PPP2R2B	Q00005	443 aa		10.82	□□□□□ -0.68
PKN1-208	ENST00000586900	CD47	Q08722	323 aa		10.82	□□□□□ -0.68
PKN1-208	ENST00000586900	KRR1	Q13601	381 aa	Known RBP	10.82	□□□□□ -0.68
PKN1-208	ENST00000586900	DAZAP2	Q15038	168 aa	Predicted RBP	10.82	□□□□□ -0.68
PKN1-208	ENST00000586900	TSC22D1	Q15714	1073 aa		10.82	□□□□□ -0.68
PKN1-208	ENST00000586900	SLC36A3	Q495N2	470 aa		10.82	□□□□□ -0.68
PKN1-208	ENST00000586900	NRN1L	Q496H8	165 aa		10.82	□□□□□ -0.68
PKN1-208	ENST00000586900	ANKRD34A	Q69YU3	496 aa		10.82	□□□□□ -0.68
PKN1-208	ENST00000586900	SLC25A47	Q6Q0C1	308 aa		10.82	□□□□□ -0.68
PKN1-208	ENST00000586900	CCDC36	Q8IYA8	594 aa		10.82	□□□□□ -0.68
PKN1-208	ENST00000586900	SYT14	Q8NB59	555 aa		10.82	□□□□□ -0.68
PKN1-208	ENST00000586900	ICA1L	Q8NDH6	482 aa		10.82	□□□□□ -0.68
PKN1-208	ENST00000586900	OR2T33	Q8NG76	320 aa		10.82	□□□□□ -0.68
PKN1-208	ENST00000586900	OR8D4	Q8NGM9	314 aa		10.82	□□□□□ -0.68
PKN1-208	ENST00000586900	TEX47	Q8TBZ9	253 aa		10.82	□□□□□ -0.68
PKN1-208	ENST00000586900	BCL2L2	Q92843	193 aa	Predicted RBP	10.82	□□□□□ -0.68
PKN1-208	ENST00000586900	RASD2	Q96D21	266 aa		10.82	□□□□□ -0.68
PKN1-208	ENST00000586900	ZNF837	Q96EG3	531 aa	Predicted RBP	10.82	□□□□□ -0.68
PKN1-208	ENST00000586900	RBM4B	Q9BQ04	359 aa	Known RBP	10.82	□□□□□ -0.68
PKN1-208	ENST00000586900	MED18	Q9BUE0	208 aa		10.82	□□□□□ -0.68
PKN1-208	ENST00000586900	RBM4	Q9BWF3	364 aa	Known RBP	10.82	□□□□□ -0.68
PKN1-208	ENST00000586900	OBP2B	Q9NPH6	170 aa		10.82	□□□□□ -0.68
PKN1-208	ENST00000586900	SLC17A5	Q9NRA2	495 aa		10.82	□□□□□ -0.68
PKN1-208	ENST00000586900	PAPOLB	Q9NRJ5	636 aa	Known RBP	10.82	□□□□□ -0.68
PKN1-208	ENST00000586900	TBC1D23	Q9NUY8	699 aa		10.82	□□□□□ -0.68
PKN1-208	ENST00000586900	ZNF226	Q9NYT6	803 aa		10.82	□□□□□ -0.68
PKN1-208	ENST00000586900	CRIM1	Q9NZV1	1036 aa		10.82	□□□□□ -0.68
PKN1-208	ENST00000586900	UTP20	O75691	2785 aa	Known RBP	10.81	□□□□□ -0.68
PKN1-208	ENST00000586900	ARPC4-TTLL3	A0A0A6YYG9	625 aa		10.81	□□□□□ -0.68
PKN1-208	ENST00000586900		H3BN98	237 aa		10.81	□□□□□ -0.68
PKN1-208	ENST00000586900	CASK	O14936	926 aa		10.81	□□□□□ -0.68
PKN1-208	ENST00000586900	SOX14	O95416	240 aa		10.81	□□□□□ -0.68
PKN1-208	ENST00000586900	THBD	P07204	575 aa		10.81	□□□□□ -0.68
PKN1-208	ENST00000586900	IGFBP1	P08833	259 aa	Predicted RBP	10.81	□□□□□ -0.68
PKN1-208	ENST00000586900	HIST1H1C	P16403	213 aa	Known RBP	10.81	□□□□□ -0.68
PKN1-208	ENST00000586900	CRYGS	P22914	178 aa		10.81	□□□□□ -0.68
PKN1-208	ENST00000586900	COL8A1	P27658	744 aa		10.81	□□□□□ -0.68
PKN1-208	ENST00000586900	CDKN2A	P42771	156 aa	Known RBP	10.81	□□□□□ -0.68
PKN1-208	ENST00000586900	GIPR	P48546	466 aa		10.81	□□□□□ -0.68
PKN1-208	ENST00000586900	ELF3	P78545	371 aa	Predicted RBP	10.81	□□□□□ -0.68
PKN1-208	ENST00000586900	TAB1	Q15750	504 aa		10.81	□□□□□ -0.68
PKN1-208	ENST00000586900	CLEC12A	Q5QGZ9	265 aa		10.81	□□□□□ -0.68
PKN1-208	ENST00000586900	C9orf135	Q5VTT2	229 aa		10.81	□□□□□ -0.68
PKN1-208	ENST00000586900	SLC27A4	Q6P1M0	643 aa		10.81	□□□□□ -0.68
PKN1-208	ENST00000586900	C22orf34	Q6ZV56	151 aa		10.81	□□□□□ -0.68
PKN1-208	ENST00000586900	MUCL1	Q96DR8	90 aa		10.81	□□□□□ -0.68
PKN1-208	ENST00000586900	FOXB1	Q99853	325 aa		10.81	□□□□□ -0.68
PKN1-208	ENST00000586900	NELFA	Q9H3P2	528 aa		10.81	□□□□□ -0.68
PKN1-208	ENST00000586900	MOV10	Q9HCE1	1003 aa	Known RBP	10.81	□□□□□ -0.68
PKN1-208	ENST00000586900	NGB	Q9NPG2	151 aa		10.81	□□□□□ -0.68
PKN1-208	ENST00000586900	KRT84	Q9NSB2	600 aa		10.81	□□□□□ -0.68
PKN1-208	ENST00000586900	USE1	Q9NZ43	259 aa		10.81	□□□□□ -0.68
PKN1-208	ENST00000586900	TMEFF2	Q9UIK5	374 aa	Predicted RBP	10.81	□□□□□ -0.68
PKN1-208	ENST00000586900	KLHL21	Q9UJP4	597 aa		10.81	□□□□□ -0.68
PKN1-208	ENST00000586900	AMDHD2	Q9Y303	409 aa		10.81	□□□□□ -0.68
PKN1-208	ENST00000586900	HECTD1	Q9ULT8	2610 aa		10.81	□□□□□ -0.68
PKN1-208	ENST00000586900	ADGRG4	Q8IZF6	3080 aa		10.81	□□□□□ -0.68
PKN1-208	ENST00000586900	PRR14L	Q5THK1	2151 aa		10.8	□□□□□ -0.68
PKN1-208	ENST00000586900	NBPF19	A0A087WUL8	3843 aa		10.8	□□□□□ -0.68
PKN1-208	ENST00000586900	SAC3D1	A6NKF1	404 aa		10.8	□□□□□ -0.68
PKN1-208	ENST00000586900	SOCS2	O14508	198 aa		10.8	□□□□□ -0.68
PKN1-208	ENST00000586900	WNT11	O96014	354 aa		10.8	□□□□□ -0.68
PKN1-208	ENST00000586900	REN	P00797	406 aa		10.8	□□□□□ -0.68
PKN1-208	ENST00000586900	CDH2	P19022	906 aa	Predicted RBP	10.8	□□□□□ -0.68
PKN1-208	ENST00000586900	HOXC12	P31275	282 aa		10.8	□□□□□ -0.68
PKN1-208	ENST00000586900	GRK5	P34947	590 aa		10.8	□□□□□ -0.68
PKN1-208	ENST00000586900	CRISP1	P54107	249 aa		10.8	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms